Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17581.1 vs. uniprot
Match:
D8LQ94_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ94_ECTSI)
HSP 1 Score: 1886 bits (4885), Expect = 0.000e+0
Identity = 1114/1335 (83.45%), Postives = 1125/1335 (84.27%), Query Frame = 0
Query: 1 MRSVRPDAQPADSAGLGGRGGDSSPESFPAGHQSRLAVPRNWRASMSRRRSEGAAGSGSGINSGITRGGSGRKEQQQSSSHLEKDGEWFGDARGVAGSASEKVLGAAVQDQEQDSPAMSLLCSITKASANAVPELCSPSSLTGDAAGPRQSRLRQRGGPSRPRFSSVGSAGSGGGAVGGGRGVFAPPSGEYYRLPWYRRPLPSNRRVGVAGGGEATHLKRASSMISAPRAGLRPPPVITSGAGXXXXXXXXXXXXXLNGVATPGGGERTRATEQREEXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPANEVPVCFAATESPTERPPLTTPMRSPTSAFEAVADRAGAAAQQAASN----VVSVNAQADVHATPTANSMAADRDESTREEGGSADRSRSGGTAVAAGTEQPRGTSPEKEHAAESEELEKLRAEVARLKREMASMAAXXXXXXXXXXXXXXXXXXXRRPSQRIETSSPVASFSSSHAQEKHPAWQWDATAAEGGESSDADGASRPMPNRLRADNSWMQXXXXXXXXXXXXXXXXXXXXRTERRYHRDSIGVGFSGKSRPGSVLPAPRKDSSNGGERSRGSSEDVGDEVGLLSPPVNGTKIEGPSPASREKEKTAAVLEGRRRDSGADSINGASGAXXXXXXXXDGADRGARGSESAGSDASVRRGXXXXXXXXXXXXXXXQMSVFFPVIAPPDPNADAGGTETAEGAAALASAAATRIGETVTPPGALRAARAARDAVSAKKQLQQQQQLAARHAPVVYAKIPVETVRRRGGVDGNGRVWRWVLAQRTEDQTVRQAVISHGLPRFGRRHIWAAWAAVATPETYKKPKQSSDPAKEGSIVNTIAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGFILITFADCVLSEREDLKSRSSRNRATSGGSSTCRSNAPADSAAAGDVTEPSDVQPGPANEGGTAVETEGKGGEAEKEAA-VKEPTVAEVAQIENECVQMLQGVIALQGGVLSRDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCRQGMFESHGLPATVKAVRRYAEGCKTFDDLVRQAPVGLNQVVAAWEEQGNNRKIALLDGEGALPDRMAAGLVEEMTGEPVYLPPPEVLSPPRHRRSPSGLAPVAATSTAFGIQFPSTPGRPPTPLTSPRSPFPEWAANIFRSSTGGPNEDGGGVPASVDVGSVNGGRGXXXXXXXXXXDNLPPTSPRFSTPSRQRQLRRAASTSWW 1330
MR+VR DAQPA+S GLGGRGGDSSPESFP GHQSRLAVPRNWRASMSRRRSEGAAGSGSGINSGITRGGSGRKEQQQSSSHLEKDGEWFGDARGVA SASEKVL AAVQDQEQDSPAMSLLCSITKASANAVPELCSPSSLTGDAAGPRQSRLRQRGGPSRPRFSSVGSAGSGGGAVGGGRGV APP G+YYRLPWYRRPLPSNRRVGVAGGGEATHLKRA VADRAGA AQQAAS VVS NAQA+VHATPTANSMAADRDESTREEGG ADRSRSGGTAVAAGTEQPRGTSPEKEHAAESEELEKLRAEVARLKREMASMAAXXXXXXXXXXXXXXXXXXXRRPSQRIETSSPVASFSSSHAQEKHPAWQWDATAAEGGESSDADGASRPMPNRLRADNSWMQXXXXXXXXXXXXXXXXXXXXRTERRYHRDSIGVGFSG SRPGSVLPAPRKDSSNGGERSRGSSED+GDEVGLLSPPVN KIEGPSPASREKEKTA VLEGRRRDSGADSINGAS A XXX RG XXXXXXXXXXXXXXXQMSVFFPVIAPPDPNADAGGTETAEGAAALASAAATRIGE+VTPPGALRAARAARDAVSAKKQLQQQQQLAARHAPVVYAKIPVETVRRRGGVDGNGRVWRWVLAQRTEDQTVRQAV+SHGLPRFGRRHIWAAWAAVATPETYKKPKQSSDPAKEGSIVNTIAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGF+LITFADCVLSEREDLKSRSSRNR TSGGSSTC SNAPADSAAAGDVTEPSDVQPGPANEG AVETEG GG AEKEAA VKEPTVAEVAQIENECVQMLQGVIALQGGVLSRDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCR+GMFESHGLPATVKAVRRYAEGCKTFD+LVRQAPVGLN+VVAAWEEQGNNRKIALLDGEGALPDRMAAGLVEEMTGEPVYLPPPEVLSPPRHRRSPSGLAPVAATSTAFGIQFPSTPGRPPTPLTSPRSPFPEWAANIFRSSTGGPNEDGGGVPASVDVGSVNGGRG DNLPPTSPRFSTPSRQRQLRRAASTSWW
Sbjct: 1 MRNVRSDAQPANSTGLGGRGGDSSPESFPPGHQSRLAVPRNWRASMSRRRSEGAAGSGSGINSGITRGGSGRKEQQQSSSHLEKDGEWFGDARGVADSASEKVLAAAVQDQEQDSPAMSLLCSITKASANAVPELCSPSSLTGDAAGPRQSRLRQRGGPSRPRFSSVGSAGSGGGAVGGGRGVVAPPPGDYYRLPWYRRPLPSNRRVGVAGGGEATHLKRA----------------------------------------------------------------------------------------------------------------------------------------------------VADRAGAVAQQAASKATSPVVSGNAQAEVHATPTANSMAADRDESTREEGGFADRSRSGGTAVAAGTEQPRGTSPEKEHAAESEELEKLRAEVARLKREMASMAAXXXXXXXXXXXXXXXXXXXRRPSQRIETSSPVASFSSSHAQEKHPAWQWDATAAEGGESSDADGASRPMPNRLRADNSWMQXXXXXXXXXXXXXXXXXXXXRTERRYHRDSIGVGFSGTSRPGSVLPAPRKDSSNGGERSRGSSEDIGDEVGLLSPPVNSAKIEGPSPASREKEKTAVVLEGRRRDSGADSINGASVAGAGAGXXXXXXXXXXRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMSVFFPVIAPPDPNADAGGTETAEGAAALASAAATRIGESVTPPGALRAARAARDAVSAKKQLQQQQQLAARHAPVVYAKIPVETVRRRGGVDGNGRVWRWVLAQRTEDQTVRQAVMSHGLPRFGRRHIWAAWAAVATPETYKKPKQSSDPAKEGSIVNTIAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGFMLITFADCVLSEREDLKSRSSRNRGTSGGSSTCSSNAPADSAAAGDVTEPSDVQPGPANEGSAAVETEGMGGGAEKEAAAVKEPTVAEVAQIENECVQMLQGVIALQGGVLSRDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCRKGMFESHGLPATVKAVRRYAEGCKTFDELVRQAPVGLNEVVAAWEEQGNNRKIALLDGEGALPDRMAAGLVEEMTGEPVYLPPPEVLSPPRHRRSPSGLAPVAATSTAFGIQFPSTPGRPPTPLTSPRSPFPEWAANIFRSSTGGPNEDGGGVPASVDVGSVNGGRGGGGG------DNLPPTSPRFSTPSRQRQLRRAASTSWW 1181
BLAST of mRNA_E-siliculosus-1a_M_contig96.17581.1 vs. uniprot
Match:
A4S0J9_OSTLU (Rab-GAP TBC domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S0J9_OSTLU)
HSP 1 Score: 63.2 bits (152), Expect = 2.220e-6
Identity = 47/133 (35.34%), Postives = 63/133 (47.37%), Query Frame = 0
Query: 811 RVWRWVLAQ----RTEDQTVRQAVISHGLPRFGRRHIWAAW--------AAVATPETYKKPKQSSDPAKEGSIVNT-IAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGFILI 930
R WR +A R + VR ++G+ R R +W AW A+ T E Y + + SD A + + I D+ART H F G L L+RVL A A AGY+QGMNYL GF+L+
Sbjct: 41 RRWRAFVANGRDARARGELVRAFARANGVGREARPRLWFAWSGAEAAKRASDTTYEEYLRAAELSDDAAAATTRDAQIEMDLARTFPEHARFAETGDALPALRRVLRATATSAA---AGYVQGMNYLGGFLLL 170
BLAST of mRNA_E-siliculosus-1a_M_contig96.17581.1 vs. uniprot
Match:
A0A7S0EL96_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EL96_9EUKA)
HSP 1 Score: 54.7 bits (130), Expect = 5.630e-5
Identity = 28/111 (25.23%), Postives = 58/111 (52.25%), Query Frame = 0
Query: 1039 RDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCR-QGMFESHGLPATVKAVRRYAEGC 1148
+ + G +++++E LL +Q P++ HLR ++L + +T +WF+C++ ++ ++S R+WDL P + VA+A+ Q + E+ + V +R C
Sbjct: 13 QSMLGHQVDSQVLEQLLEQQLPELSAHLRSLSLSVPFVTTQWFLCLFLNALPSESCF-RVWDLIFCLH---PCTIFQVAIALFGSMEEQSLLEATDIGPAVFVIRSATRSC 119
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17581.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 3
M R S V R P D A Q P A D S A G L G G R G G D S S P E S F P A G H Q S R L A V P R N W R A S M S R R R S E G A A G S G S G I N S G I T R G G S G R K E Q Q Q S S S H L E K D G E W F G D A R G V A G S A S E K V L G A A V Q D Q E Q D S P A M S L L C S I T K A S A N A V P E L C S P S S L T G D A A G P R Q S R L R Q R G G P S R P R F S S V G S A G S G G G A V G G G R G V F A P P S G E Y Y R L P W Y R R P L P S N R R V G V A G G G E A T H L K R A S S M I S A P R A G L R P P P V I T S G A G A A A A G A A A A A G A A L N G V A T P G G G E R T R A T E Q R E E N Q Q Q G K Q Q Q R Q Q P D K Q Q Q Q Q D K Q Q D E Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q D K Q Q D K Q Q S P A N E V P V C F A A T E S P T E R P P L T T P M R S P T S A F E A V A D R A G A A A Q Q A A S N V V S V N A Q A D V H A T P T A N S M A A D R D E S T R E E G G S A D R S R S G G T A V A A G T E Q P R G T S P E K E H A A E S E E L E K L R A E V A R L K R E M A S M A A A A A T T G I T T P K Q Q K S G G S R R R P S Q R I E T S S P V A S F S S S H A Q E K H P A W Q W D A T A A E G G E S S D A D G A S R P M P N R L R A D N S W M Q Q R R R S S S S S S G T M E R R S S G G R T E R R Y H R D S I G V G F S G K S R P G S V L P A P R K D S S N G G E R S R G S S E D V G D E V G L L S P P V N G T K I E G P S P A S R E K E K T A A V L E G R R R D S G A D S I N G A S G A G A G A G A G G D G A D R G A R G S E S A G S D A S V R R G G A R G N E S A G S D A S M R Q M S V F F P V I A P P D P N A D A G G T E T A E G A A A L A S A A A T R I G E T V T P P G A L R A A R A A R D A V S A K K Q L Q Q Q Q Q L A A R H A P V V Y A K I P V E T V R R R G G V D G N G R V W R W V L A Q R T E D Q T V R Q A V I S H G L P R F G R R H I W A A W A A V A T P E T Y K K P K Q S S D P A K E G S I V N T I A H D V A R T K I V H P L F G S G G Q G L A M L K R V L V R C A E L G A V K E A G Y I Q G M N Y L A G F I L I T F A D C V L S E R E D L K S R S S R N R A T S G G S S T C R S N A P A D S A A A G D V T E P S D V Q P G P A N E G G T A V E T E G K G G E A E K E A A V K E P T V A E V A Q I E N E C V Q M L Q G V I A L Q G G V L S R D L W G L H A N T E L V E D L L S R Q C P D V M E H L R K V N L E L I V L T P R W F I C I Y A G S M S N Q S V V T R I W D L F M W Y G R R G P A V L V W V A L A V L H G C R Q G M F E S H G L P A T V K A V R R Y A E G C K T F D D L V R Q A P V G L N Q V V A A W E E Q G N N R K I A L L D G E G A L P D R M A A G L V E E M T G E P V Y L P P P E V L S P P R H R R S P S G L A P V A A T S T A F G I Q F P S T P G R P P T P L T S P R S P F P E W A A N I F R S S T G G P N E D G G G V P A S V D V G S V N G G R G G G G G G G G G G G D N L P P T S P R F S T P S R Q R Q L R R A A S T S W W * 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 Expect = 0.00e+0 / Id = 83.45 Expect = 2.22e-6 / Id = 35.34 Expect = 5.63e-5 / Id = 25.23 Sequence D8LQ94_ECTSI A4S0J9_OSTLU A0A7S0EL96_9EUKA
Match Name E-value Identity Description
D8LQ94_ECTSI 0.000e+0 83.45 Rab-GAP TBC domain-containing protein n=2 Tax=Ecto... [more] A4S0J9_OSTLU 2.220e-6 35.34 Rab-GAP TBC domain-containing protein n=1 Tax=Ostr... [more] A0A7S0EL96_9EUKA 5.630e-5 25.23 Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
M R S V R P D A Q P A D S A G L G G R G G D S S P E S F P A G H Q S R L A V P R N W R A S M S R R R S E G A A G S G S G I N S G I T R G G S G R K E Q Q Q S S S H L E K D G E W F G D A R G V A G S A S E K V L G A A V Q D Q E Q D S P A M S L L C S I T K A S A N A V P E L C S P S S L T G D A A G P R Q S R L R Q R G G P S R P R F S S V G S A G S G G G A V G G G R G V F A P P S G E Y Y R L P W Y R R P L P S N R R V G V A G G G E A T H L K R A S S M I S A P R A G L R P P P V I T S G A G A A A A G A A A A A G A A L N G V A T P G G G E R T R A T E Q R E E N Q Q Q G K Q Q Q R Q Q P D K Q Q Q Q Q D K Q Q D E Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q D K Q Q D K Q Q S P A N E V P V C F A A T E S P T E R P P L T T P M R S P T S A F E A V A D R A G A A A Q Q A A S N V V S V N A Q A D V H A T P T A N S M A A D R D E S T R E E G G S A D R S R S G G T A V A A G T E Q P R G T S P E K E H A A E S E E L E K L R A E V A R L K R E M A S M A A A A A T T G I T T P K Q Q K S G G S R R R P S Q R I E T S S P V A S F S S S H A Q E K H P A W Q W D A T A A E G G E S S D A D G A S R P M P N R L R A D N S W M Q Q R R R S S S S S S G T M E R R S S G G R T E R R Y H R D S I G V G F S G K S R P G S V L P A P R K D S S N G G E R S R G S S E D V G D E V G L L S P P V N G T K I E G P S P A S R E K E K T A A V L E G R R R D S G A D S I N G A S G A G A G A G A G G D G A D R G A R G S E S A G S D A S V R R G G A R G N E S A G S D A S M R Q M S V F F P V I A P P D P N A D A G G T E T A E G A A A L A S A A A T R I G E T V T P P G A L R A A R A A R D A V S A K K Q L Q Q Q Q Q L A A R H A P V V Y A K I P V E T V R R R G G V D G N G R V W R W V L A Q R T E D Q T V R Q A V I S H G L P R F G R R H I W A A W A A V A T P E T Y K K P K Q S S D P A K E G S I V N T I A H D V A R T K I V H P L F G S G G Q G L A M L K R V L V R C A E L G A V K E A G Y I Q G M N Y L A G F I L I T F A D C V L S E R E D L K S R S S R N R A T S G G S S T C R S N A P A D S A A A G D V T E P S D V Q P G P A N E G G T A V E T E G K G G E A E K E A A V K E P T V A E V A Q I E N E C V Q M L Q G V I A L Q G G V L S R D L W G L H A N T E L V E D L L S R Q C P D V M E H L R K V N L E L I V L T P R W F I C I Y A G S M S N Q S V V T R I W D L F M W Y G R R G P A V L V W V A L A V L H G C R Q G M F E S H G L P A T V K A V R R Y A E G C K T F D D L V R Q A P V G L N Q V V A A W E E Q G N N R K I A L L D G E G A L P D R M A A G L V E E M T G E P V Y L P P P E V L S P P R H R R S P S G L A P V A A T S T A F G I Q F P S T P G R P P T P L T S P R S P F P E W A A N I F R S S T G G P N E D G G G V P A S V D V G S V N G G R G G G G G G G G G G G D N L P P T S P R F S T P S R Q R Q L R R A A S T S W W * 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 Score = Score = Score = Expect = 6.1E-15 / Score = 57.1 Expect = 3.2E-8 / Score = 35.6 Score = Score = Expect = 1.6E-5 / Score = 30.9 Expect = 4.0E-7 / Score = 29.9 Expect = 5.6E-12 / Score = 45.8 Score = 14.583 Score = Score = Sequence Coil Coil Coil G3DSA:1.10.472.80 G3DSA:1.10.8.270 PTHR46705:SF10 PTHR46705 SM00164 PF00566 PS50086 SSF47923 SSF47923
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 292..334 None No IPR available COILS Coil Coil coord: 763..783 None No IPR available COILS Coil Coil coord: 444..471 None No IPR available GENE3D 1.10.472.80 coord: 1036..1159 None No IPR available GENE3D 1.10.8.270 coord: 839..936 None No IPR available PANTHER PTHR46705:SF10 coord: 272..339 None No IPR available PANTHER PTHR46705 FAMILY NOT NAMED coord: 272..339 IPR000195 Rab-GTPase-TBC domain SMART SM00164 tbc_4 coord: 831..1132 IPR000195 Rab-GTPase-TBC domain PFAM PF00566 RabGAP-TBC coord: 855..934 IPR000195 Rab-GTPase-TBC domain PROSITE PS50086 TBC_RABGAP coord: 834..1106 IPR035969 Rab-GTPase-TBC domain superfamily SUPERFAMILY 47923 Ypt/Rab-GAP domain of gyp1p coord: 1040..1147 IPR035969 Rab-GTPase-TBC domain superfamily SUPERFAMILY 47923 Ypt/Rab-GAP domain of gyp1p coord: 821..1065
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_M_contig96.17581.1 ID=prot_E-siliculosus-1a_M_contig96.17581.1|Name=mRNA_E-siliculosus-1a_M_contig96.17581.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1331bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR035969 Rab-GTPase_TBC_sf IPR000195 Rab-GTPase-TBC_dom