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Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17581.1 vs. uniprot
Match: D8LQ94_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ94_ECTSI) HSP 1 Score: 1886 bits (4885), Expect = 0.000e+0 Identity = 1114/1335 (83.45%), Postives = 1125/1335 (84.27%), Query Frame = 0 Query: 1 MRSVRPDAQPADSAGLGGRGGDSSPESFPAGHQSRLAVPRNWRASMSRRRSEGAAGSGSGINSGITRGGSGRKEQQQSSSHLEKDGEWFGDARGVAGSASEKVLGAAVQDQEQDSPAMSLLCSITKASANAVPELCSPSSLTGDAAGPRQSRLRQRGGPSRPRFSSVGSAGSGGGAVGGGRGVFAPPSGEYYRLPWYRRPLPSNRRVGVAGGGEATHLKRASSMISAPRAGLRPPPVITSGAGXXXXXXXXXXXXXLNGVATPGGGERTRATEQREEXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPANEVPVCFAATESPTERPPLTTPMRSPTSAFEAVADRAGAAAQQAASN----VVSVNAQADVHATPTANSMAADRDESTREEGGSADRSRSGGTAVAAGTEQPRGTSPEKEHAAESEELEKLRAEVARLKREMASMAAXXXXXXXXXXXXXXXXXXXRRPSQRIETSSPVASFSSSHAQEKHPAWQWDATAAEGGESSDADGASRPMPNRLRADNSWMQXXXXXXXXXXXXXXXXXXXXRTERRYHRDSIGVGFSGKSRPGSVLPAPRKDSSNGGERSRGSSEDVGDEVGLLSPPVNGTKIEGPSPASREKEKTAAVLEGRRRDSGADSINGASGAXXXXXXXXDGADRGARGSESAGSDASVRRGXXXXXXXXXXXXXXXQMSVFFPVIAPPDPNADAGGTETAEGAAALASAAATRIGETVTPPGALRAARAARDAVSAKKQLQQQQQLAARHAPVVYAKIPVETVRRRGGVDGNGRVWRWVLAQRTEDQTVRQAVISHGLPRFGRRHIWAAWAAVATPETYKKPKQSSDPAKEGSIVNTIAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGFILITFADCVLSEREDLKSRSSRNRATSGGSSTCRSNAPADSAAAGDVTEPSDVQPGPANEGGTAVETEGKGGEAEKEAA-VKEPTVAEVAQIENECVQMLQGVIALQGGVLSRDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCRQGMFESHGLPATVKAVRRYAEGCKTFDDLVRQAPVGLNQVVAAWEEQGNNRKIALLDGEGALPDRMAAGLVEEMTGEPVYLPPPEVLSPPRHRRSPSGLAPVAATSTAFGIQFPSTPGRPPTPLTSPRSPFPEWAANIFRSSTGGPNEDGGGVPASVDVGSVNGGRGXXXXXXXXXXDNLPPTSPRFSTPSRQRQLRRAASTSWW 1330
MR+VR DAQPA+S GLGGRGGDSSPESFP GHQSRLAVPRNWRASMSRRRSEGAAGSGSGINSGITRGGSGRKEQQQSSSHLEKDGEWFGDARGVA SASEKVL AAVQDQEQDSPAMSLLCSITKASANAVPELCSPSSLTGDAAGPRQSRLRQRGGPSRPRFSSVGSAGSGGGAVGGGRGV APP G+YYRLPWYRRPLPSNRRVGVAGGGEATHLKRA VADRAGA AQQAAS VVS NAQA+VHATPTANSMAADRDESTREEGG ADRSRSGGTAVAAGTEQPRGTSPEKEHAAESEELEKLRAEVARLKREMASMAAXXXXXXXXXXXXXXXXXXXRRPSQRIETSSPVASFSSSHAQEKHPAWQWDATAAEGGESSDADGASRPMPNRLRADNSWMQXXXXXXXXXXXXXXXXXXXXRTERRYHRDSIGVGFSG SRPGSVLPAPRKDSSNGGERSRGSSED+GDEVGLLSPPVN KIEGPSPASREKEKTA VLEGRRRDSGADSINGAS A XXX RG XXXXXXXXXXXXXXXQMSVFFPVIAPPDPNADAGGTETAEGAAALASAAATRIGE+VTPPGALRAARAARDAVSAKKQLQQQQQLAARHAPVVYAKIPVETVRRRGGVDGNGRVWRWVLAQRTEDQTVRQAV+SHGLPRFGRRHIWAAWAAVATPETYKKPKQSSDPAKEGSIVNTIAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGF+LITFADCVLSEREDLKSRSSRNR TSGGSSTC SNAPADSAAAGDVTEPSDVQPGPANEG AVETEG GG AEKEAA VKEPTVAEVAQIENECVQMLQGVIALQGGVLSRDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCR+GMFESHGLPATVKAVRRYAEGCKTFD+LVRQAPVGLN+VVAAWEEQGNNRKIALLDGEGALPDRMAAGLVEEMTGEPVYLPPPEVLSPPRHRRSPSGLAPVAATSTAFGIQFPSTPGRPPTPLTSPRSPFPEWAANIFRSSTGGPNEDGGGVPASVDVGSVNGGRG DNLPPTSPRFSTPSRQRQLRRAASTSWW
Sbjct: 1 MRNVRSDAQPANSTGLGGRGGDSSPESFPPGHQSRLAVPRNWRASMSRRRSEGAAGSGSGINSGITRGGSGRKEQQQSSSHLEKDGEWFGDARGVADSASEKVLAAAVQDQEQDSPAMSLLCSITKASANAVPELCSPSSLTGDAAGPRQSRLRQRGGPSRPRFSSVGSAGSGGGAVGGGRGVVAPPPGDYYRLPWYRRPLPSNRRVGVAGGGEATHLKRA----------------------------------------------------------------------------------------------------------------------------------------------------VADRAGAVAQQAASKATSPVVSGNAQAEVHATPTANSMAADRDESTREEGGFADRSRSGGTAVAAGTEQPRGTSPEKEHAAESEELEKLRAEVARLKREMASMAAXXXXXXXXXXXXXXXXXXXRRPSQRIETSSPVASFSSSHAQEKHPAWQWDATAAEGGESSDADGASRPMPNRLRADNSWMQXXXXXXXXXXXXXXXXXXXXRTERRYHRDSIGVGFSGTSRPGSVLPAPRKDSSNGGERSRGSSEDIGDEVGLLSPPVNSAKIEGPSPASREKEKTAVVLEGRRRDSGADSINGASVAGAGAGXXXXXXXXXXRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMSVFFPVIAPPDPNADAGGTETAEGAAALASAAATRIGESVTPPGALRAARAARDAVSAKKQLQQQQQLAARHAPVVYAKIPVETVRRRGGVDGNGRVWRWVLAQRTEDQTVRQAVMSHGLPRFGRRHIWAAWAAVATPETYKKPKQSSDPAKEGSIVNTIAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGFMLITFADCVLSEREDLKSRSSRNRGTSGGSSTCSSNAPADSAAAGDVTEPSDVQPGPANEGSAAVETEGMGGGAEKEAAAVKEPTVAEVAQIENECVQMLQGVIALQGGVLSRDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCRKGMFESHGLPATVKAVRRYAEGCKTFDELVRQAPVGLNEVVAAWEEQGNNRKIALLDGEGALPDRMAAGLVEEMTGEPVYLPPPEVLSPPRHRRSPSGLAPVAATSTAFGIQFPSTPGRPPTPLTSPRSPFPEWAANIFRSSTGGPNEDGGGVPASVDVGSVNGGRGGGGG------DNLPPTSPRFSTPSRQRQLRRAASTSWW 1181
BLAST of mRNA_E-siliculosus-1a_M_contig96.17581.1 vs. uniprot
Match: A4S0J9_OSTLU (Rab-GAP TBC domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S0J9_OSTLU) HSP 1 Score: 63.2 bits (152), Expect = 2.220e-6 Identity = 47/133 (35.34%), Postives = 63/133 (47.37%), Query Frame = 0 Query: 811 RVWRWVLAQ----RTEDQTVRQAVISHGLPRFGRRHIWAAW--------AAVATPETYKKPKQSSDPAKEGSIVNT-IAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGFILI 930
R WR +A R + VR ++G+ R R +W AW A+ T E Y + + SD A + + I D+ART H F G L L+RVL A A AGY+QGMNYL GF+L+
Sbjct: 41 RRWRAFVANGRDARARGELVRAFARANGVGREARPRLWFAWSGAEAAKRASDTTYEEYLRAAELSDDAAAATTRDAQIEMDLARTFPEHARFAETGDALPALRRVLRATATSAA---AGYVQGMNYLGGFLLL 170
BLAST of mRNA_E-siliculosus-1a_M_contig96.17581.1 vs. uniprot
Match: A0A7S0EL96_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EL96_9EUKA) HSP 1 Score: 54.7 bits (130), Expect = 5.630e-5 Identity = 28/111 (25.23%), Postives = 58/111 (52.25%), Query Frame = 0 Query: 1039 RDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCR-QGMFESHGLPATVKAVRRYAEGC 1148
+ + G +++++E LL +Q P++ HLR ++L + +T +WF+C++ ++ ++S R+WDL P + VA+A+ Q + E+ + V +R C
Sbjct: 13 QSMLGHQVDSQVLEQLLEQQLPELSAHLRSLSLSVPFVTTQWFLCLFLNALPSESCF-RVWDLIFCLH---PCTIFQVAIALFGSMEEQSLLEATDIGPAVFVIRSATRSC 119
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 292..334 |
None | No IPR available | COILS | Coil | Coil | coord: 763..783 |
None | No IPR available | COILS | Coil | Coil | coord: 444..471 |
None | No IPR available | GENE3D | 1.10.472.80 | | coord: 1036..1159 e-value: 6.1E-15 score: 57.1 |
None | No IPR available | GENE3D | 1.10.8.270 | | coord: 839..936 e-value: 3.2E-8 score: 35.6 |
None | No IPR available | PANTHER | PTHR46705:SF10 | | coord: 272..339 |
None | No IPR available | PANTHER | PTHR46705 | FAMILY NOT NAMED | coord: 272..339 |
IPR000195 | Rab-GTPase-TBC domain | SMART | SM00164 | tbc_4 | coord: 831..1132 e-value: 1.6E-5 score: 30.9 |
IPR000195 | Rab-GTPase-TBC domain | PFAM | PF00566 | RabGAP-TBC | coord: 855..934 e-value: 4.0E-7 score: 29.9 coord: 1039..1126 e-value: 5.6E-12 score: 45.8 |
IPR000195 | Rab-GTPase-TBC domain | PROSITE | PS50086 | TBC_RABGAP | coord: 834..1106 score: 14.583 |
IPR035969 | Rab-GTPase-TBC domain superfamily | SUPERFAMILY | 47923 | Ypt/Rab-GAP domain of gyp1p | coord: 1040..1147 |
IPR035969 | Rab-GTPase-TBC domain superfamily | SUPERFAMILY | 47923 | Ypt/Rab-GAP domain of gyp1p | coord: 821..1065 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_M_contig96.17581.1 ID=prot_E-siliculosus-1a_M_contig96.17581.1|Name=mRNA_E-siliculosus-1a_M_contig96.17581.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1331bp MRSVRPDAQPADSAGLGGRGGDSSPESFPAGHQSRLAVPRNWRASMSRRR SEGAAGSGSGINSGITRGGSGRKEQQQSSSHLEKDGEWFGDARGVAGSAS EKVLGAAVQDQEQDSPAMSLLCSITKASANAVPELCSPSSLTGDAAGPRQ SRLRQRGGPSRPRFSSVGSAGSGGGAVGGGRGVFAPPSGEYYRLPWYRRP LPSNRRVGVAGGGEATHLKRASSMISAPRAGLRPPPVITSGAGAAAAGAA AAAGAALNGVATPGGGERTRATEQREENQQQGKQQQRQQPDKQQQQQDKQ QDEQQQQQQQQQQQQQQQQQQQQQQQDKQQDKQQSPANEVPVCFAATESP TERPPLTTPMRSPTSAFEAVADRAGAAAQQAASNVVSVNAQADVHATPTA NSMAADRDESTREEGGSADRSRSGGTAVAAGTEQPRGTSPEKEHAAESEE LEKLRAEVARLKREMASMAAAAATTGITTPKQQKSGGSRRRPSQRIETSS PVASFSSSHAQEKHPAWQWDATAAEGGESSDADGASRPMPNRLRADNSWM QQRRRSSSSSSGTMERRSSGGRTERRYHRDSIGVGFSGKSRPGSVLPAPR KDSSNGGERSRGSSEDVGDEVGLLSPPVNGTKIEGPSPASREKEKTAAVL EGRRRDSGADSINGASGAGAGAGAGGDGADRGARGSESAGSDASVRRGGA RGNESAGSDASMRQMSVFFPVIAPPDPNADAGGTETAEGAAALASAAATR IGETVTPPGALRAARAARDAVSAKKQLQQQQQLAARHAPVVYAKIPVETV RRRGGVDGNGRVWRWVLAQRTEDQTVRQAVISHGLPRFGRRHIWAAWAAV ATPETYKKPKQSSDPAKEGSIVNTIAHDVARTKIVHPLFGSGGQGLAMLK RVLVRCAELGAVKEAGYIQGMNYLAGFILITFADCVLSEREDLKSRSSRN RATSGGSSTCRSNAPADSAAAGDVTEPSDVQPGPANEGGTAVETEGKGGE AEKEAAVKEPTVAEVAQIENECVQMLQGVIALQGGVLSRDLWGLHANTEL VEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWD LFMWYGRRGPAVLVWVALAVLHGCRQGMFESHGLPATVKAVRRYAEGCKT FDDLVRQAPVGLNQVVAAWEEQGNNRKIALLDGEGALPDRMAAGLVEEMT GEPVYLPPPEVLSPPRHRRSPSGLAPVAATSTAFGIQFPSTPGRPPTPLT SPRSPFPEWAANIFRSSTGGPNEDGGGVPASVDVGSVNGGRGGGGGGGGG GGDNLPPTSPRFSTPSRQRQLRRAASTSWW* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term | Definition |
IPR035969 | Rab-GTPase_TBC_sf |
IPR000195 | Rab-GTPase-TBC_dom |
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