prot_E-siliculosus-1a_M_contig96.17575.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig96.17575.1
Unique Nameprot_E-siliculosus-1a_M_contig96.17575.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length233
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17575.1 vs. uniprot
Match: A0A6H5KKT3_9PHAE (U1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKT3_9PHAE)

HSP 1 Score: 385 bits (989), Expect = 4.460e-134
Identity = 228/232 (98.28%), Postives = 230/232 (99.14%), Query Frame = 0
Query:    1 MSKDLGYRQVKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQDPDMAAMMGFGGFGGGSKK 232
            MSKDLGY+QVKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEG PARRSQKEEFQPAA GAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQDP+MAAMMGFGGFGGGSKK
Sbjct:    1 MSKDLGYKQVKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGAPARRSQKEEFQPAAPGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQDPEMAAMMGFGGFGGGSKK 232          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17575.1 vs. uniprot
Match: A0A835ZCC8_9STRA (U1-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC8_9STRA)

HSP 1 Score: 182 bits (461), Expect = 7.560e-54
Identity = 141/232 (60.78%), Postives = 166/232 (71.55%), Query Frame = 0
Query:    2 SKDLGYRQVKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREED--RISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQDPDMAAMMGFGGFGGGSK 231
            S DLG +QV NV  RR+WD + YE KAKER+E+GD+ +E           KEEFQPA  GA GPAGS RAYLK R  KVDL S+L KTQV+T+A+  S QGG++CE+CKC LKDSI YLDHINGKKHQR LG+SMRVERS+V  VK++L   + R ED  + SGA +K SA  E++ R+ E     XXXXXXXXXXXXXXXXXXXXXXXX        AAMMGFGGF GG +
Sbjct:    7 SDDLGDKQVSNV-VRRSWDVELYEKKAKERLERGDEVEEARPASSKAALNKEEFQPAPDGAQGPAGSRRAYLKARTEKVDLESRLHKTQVITSAAASSSQGGYWCEVCKCLLKDSIAYLDHINGKKHQRALGFSMRVERSSVGSVKEKLDKLRARAEDAAKASGAPRK-SAVQEYEERLAEYAAX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMMGFGGFSGGKR 235          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17575.1 vs. uniprot
Match: A0A7S2WR40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WR40_9STRA)

HSP 1 Score: 167 bits (423), Expect = 3.170e-48
Identity = 124/218 (56.88%), Postives = 157/218 (72.02%), Query Frame = 0
Query:   16 RRTWDRDYYEAKAKERI--EQGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQDPDMAAMMGFGGFGGGSK 231
            RRTWD   YE KA+ER+  E+G   +   +  P R   ++EF+ A   AAGPAGSARA+L  R R + L    GKTQ++       + GGWYC++C+C LKDS NYLDHINGKKHQR+LG+SMRVERSTV QV +R K+ K+R+ED +S A + P+A + ++ R+  A++ EXXXXXXXXXXXXXXXXXXXXXX  ME  DPD+ A MGFGGFGGG+K
Sbjct:   13 RRTWDVKEYEKKAQERLAREEGGIVEGDVDDRPVR--DRDEFRRAEDQAAGPAGSARAFLNNRNRALGLEKAAGKTQIIADNGLRQKGGGWYCDVCECLLKDSSNYLDHINGKKHQRKLGFSMRVERSTVGQVSERFKLAKKRKEDEMSVATR-PTAIEAYEQRIAAAQEEEXXXXXXXXXXXXXXXXXXXXXX--MEGMDPDLMAAMGFGGFGGGAK 225          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17575.1 vs. uniprot
Match: W7U2Z2_9STRA (Zinc finger matrin-type protein 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2Z2_9STRA)

HSP 1 Score: 156 bits (394), Expect = 8.660e-44
Identity = 104/225 (46.22%), Postives = 134/225 (59.56%), Query Frame = 0
Query:   12 NVESRRTWDRDYYEAKAKERIEQ---GDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQ-------DPDMAAMMGFGGF 226
            NVE RRTWD +++E  AKER+E+   GD  ++K    P    ++EEFQ A AGAAGP GS RAYLK RE  + L  K+GK QVVT +S P QQGG++C+IC+C LKDS+ YLDHINGKKHQ+ LGYSMRVER  V +VK+RL   K+RE+++     +    E   D   ++ E +E                         E         DP+MAA+MGFGGF
Sbjct:   17 NVE-RRTWDLEHFEKIAKERLEKEASGDVEKKK----PGFVRKREEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERLNALKRREDEKKKAGPR----ESAIDAYQKKLEKDEAIKAQWKEARKEARINVIQRATKEEESTVEEEGGVDPEMAALMGFGGF 232          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17575.1 vs. uniprot
Match: W2PLF3_PHYPN (U1-type domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2PLF3_PHYPN)

HSP 1 Score: 152 bits (383), Expect = 4.980e-42
Identity = 123/236 (52.12%), Postives = 154/236 (65.25%), Query Frame = 0
Query:   10 VKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQ--------------DPDMAAMMGFGGFGGGSK 231
            V NV +R+TWDR +YE  A+ R E      EK+E     +S KEEFQ A  GAAGPAGSARA+LK R  K+ L S +G  +VV +    S+ GG+YCE+C+CGLKDS+ YLDHINGKKH R+LGYSMRVERSTV QVK+RL+   +R+ D +    KK  A ++++ +++ AE+  XXXXXXXXXXXXXXXXXXX                       D +M AMMGFGGFGG  K
Sbjct:   13 VANV-TRQTWDRAHYEKLAQLRAE---GKLEKEETKKVIKSTKEEFQAANEGAAGPAGSARAFLKARTNKMSLESSVGTVKVVKSDDV-SKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKNRLQSASKRKWDPLMA--KKLDAMEDYEKKLKAAEEEXXXXXXXXXXXXXXXXXXXXALEQDKSDDADKKPEAADEALDADAEMMAMMGFGGFGGSKK 241          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17575.1 vs. uniprot
Match: A0A8J5JCN4_9STRA (zf-C2H2_jaz domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JCN4_9STRA)

HSP 1 Score: 150 bits (380), Expect = 8.710e-42
Identity = 112/226 (49.56%), Postives = 138/226 (61.06%), Query Frame = 0
Query:   10 VKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQDPD----MAAMMGFGGFGGGSK 231
            V NV +R+TWDR +YE  A+ R E      EK+E   A +S KEEFQ A  GAAGPAGSARA+LK R  K+ L + +G  +VV +    S+ GG+YCE+C+CGLKDS+ YLDHINGKKH R+LGYSMRVERSTV QVK+RL+ ++           KK  A +E + RV+      XXXXXXXX                   + PD    M AMMGFGGFGG  K
Sbjct:   16 VANV-ARQTWDRAHYEKLAQLRAE---GQLEKEETKKAIKSSKEEFQSANEGAAGPAGSARAFLKARTAKMSLETSVGTVKVVKSEDL-SKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKNRLQNYE-----------KKLKAAEEEEARVKXXXXXXXXXXXXXXDTLDQDKNDDADKKPEAADEVPDADAEMMAMMGFGGFGGSKK 225          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17575.1 vs. uniprot
Match: A0A3R7GK79_9STRA (U1-type domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GK79_9STRA)

HSP 1 Score: 149 bits (377), Expect = 4.170e-41
Identity = 111/238 (46.64%), Postives = 143/238 (60.08%), Query Frame = 0
Query:   10 VKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQ----------------DPDMAAMMGFGGFGGGSK 231
            V NV +R+TWDR++YE  AK R E      E++E     +S KEEFQ A   AAGPAGSARA+LK R  K+ L + +G  +VV +    S+ GG+YCE+C+CGLKDS+ YLDHINGKKH R+LGYSMRVERSTV QVK RL+   +R+ D +    KK     +++ +V+EAE+ E       XXXXXXXX            +                D +M +MMGFGGFGG  K
Sbjct:   13 VANV-ARQTWDREHYEKLAKLRAE---GQLEQEETKKVIKSSKEEFQAADDRAAGPAGSARAFLKARTSKMSLENSVGTVKVVKSDDL-SKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKSRLQSASKRKWDPLM--TKKLDTMADYEKKVKEAEEEEARIKRQKXXXXXXXXLGDQQTSEVKSEKATDKKPEAEDEAVPDADTEMMSMMGFGGFGGSKK 243          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17575.1 vs. uniprot
Match: A0A0P1ATE8_PLAHL (Zinc finger matrin-type protein 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ATE8_PLAHL)

HSP 1 Score: 149 bits (375), Expect = 2.850e-40
Identity = 103/232 (44.40%), Postives = 132/232 (56.90%), Query Frame = 0
Query:   10 VKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXX----------MEFQDPDMAAMMGFGGFGGGSK 231
            V NV  R+TWDR +YE  A+ R E G    EK+       S KEEFQ A   AAGPAGSARA+LK R  K+ L + +G  +VV +    S+  G+YCE+C+C LKDS+ YLDHINGKKH R+LGYSMRVERSTV QVKDRL+   +R+ D +    KK  A +E++ +++ AE+ E                                  +   D +M AMMGFGGFGG  K
Sbjct:   66 VSNV-VRQTWDRAHYEKLAQLRAEGG---VEKETTKKVIHSSKEEFQTADESAAGPAGSARAFLKARTAKMSLETSVGTVKVVKSDEL-SKNSGYYCEVCECSLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKDRLQSAAKRKWDPLM--TKKLDAMEEYEKKLKAAEEAEICLKRQKKEQRKAKKCESEDLSQDRVTAEETVDVVSESDAEMMAMMGFGGFGGSKK 290          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17575.1 vs. uniprot
Match: UPI000A2A692D (zinc finger matrin-type protein 2 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A692D)

HSP 1 Score: 143 bits (361), Expect = 3.300e-39
Identity = 100/221 (45.25%), Postives = 129/221 (58.37%), Query Frame = 0
Query:   11 KNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQDPDMAAMMGFGGFGGGSK 231
            KN   RRTWD+D YE KAKER+++ +D          R +  +                R  LK RE +VDL S LGK+ V+T +ST SQ GG+YC +C C +KDSIN+LDHINGKKHQR LG SMRVERST+ QVK R +++K++ E+      +K +A+ + D RV   ++ EXXXXXXX                 +   DPDMAAMMGF GFG   K
Sbjct:    8 KNDNFRRTWDKDEYEKKAKERLQELEDXXXXXXXXXRREAPIK----------------RKLLKKREYEVDLESNLGKSVVITKSSTMSQSGGYYCNVCDCIVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFELNKRKREE------EKQTADYDLDERVAILKEEEXXXXXXXKDYKREKKLKTQDQDSGV---DPDMAAMMGFSGFGSSKK 203          
BLAST of mRNA_E-siliculosus-1a_M_contig96.17575.1 vs. uniprot
Match: UPI0002658601 (zinc finger matrin-type protein 2 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002658601)

HSP 1 Score: 142 bits (359), Expect = 8.280e-39
Identity = 108/221 (48.87%), Postives = 139/221 (62.90%), Query Frame = 0
Query:   16 RRTWDRDYYEAKAKERIEQGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSA-----RAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQDPDMAAMMGFGGFGGGSK 231
            RR WDRD YE +AKER E GD+          +RS  ++ +     + GP+ S      R  LK R+ KVDL S+LGKT V++  +  SQ GG+YC +C C +KDSIN+LDHINGKKHQR LG SM+VERS++ QVK+RL+M++++ E++          E     R+RE E+  XXXXXXXXXXXXXXX         +   DPDMAAMMGF GFGG  K
Sbjct:   10 RRKWDRDEYEKRAKERAE-GDN---------EKRSLSDDDEDGCGPSVGPSSSREKKPQRELLKPRQYKVDLDSRLGKTTVISKTADHSQAGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMKVERSSLDQVKNRLEMNRRKVEEK--------KKEYNLSERIREVEEXXXXXXXXXXXXXXXXXRKIDSEDQGL---DPDMAAMMGFSGFGGSKK 209          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17575.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKT3_9PHAE4.460e-13498.28U1-type domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835ZCC8_9STRA7.560e-5460.78U1-type domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2WR40_9STRA3.170e-4856.88Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7U2Z2_9STRA8.660e-4446.22Zinc finger matrin-type protein 2 n=1 Tax=Nannochl... [more]
W2PLF3_PHYPN4.980e-4252.12U1-type domain-containing protein n=11 Tax=Phytoph... [more]
A0A8J5JCN4_9STRA8.710e-4249.56zf-C2H2_jaz domain-containing protein n=1 Tax=Phyt... [more]
A0A3R7GK79_9STRA4.170e-4146.64U1-type domain-containing protein n=3 Tax=Phytopht... [more]
A0A0P1ATE8_PLAHL2.850e-4044.40Zinc finger matrin-type protein 2 n=1 Tax=Plasmopa... [more]
UPI000A2A692D3.300e-3945.25zinc finger matrin-type protein 2 n=1 Tax=Exaiptas... [more]
UPI00026586018.280e-3948.87zinc finger matrin-type protein 2 n=1 Tax=Galendro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 178..209
NoneNo IPR availableGENE3D3.30.160.60coord: 93..135
e-value: 2.2E-7
score: 32.3
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 101..135
e-value: 2.7E-8
score: 43.6
IPR022755Zinc finger, double-stranded RNA bindingPFAMPF12171zf-C2H2_jazcoord: 104..129
e-value: 1.2E-6
score: 28.6
IPR040107U4/U6.U5 small nuclear ribonucleoprotein component Snu23PANTHERPTHR45986FAMILY NOT NAMEDcoord: 12..229
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 98..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig96contigE-siliculosus-1a_M_contig96:205271..208256 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig96.17575.1mRNA_E-siliculosus-1a_M_contig96.17575.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig96 205222..208896 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig96.17575.1 ID=prot_E-siliculosus-1a_M_contig96.17575.1|Name=mRNA_E-siliculosus-1a_M_contig96.17575.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=233bp
MSKDLGYRQVKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGGPARRS
QKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQ
QGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRL
KMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEERRKRQKREAKRLAK
KKQQEEEEEMEFQDPDMAAMMGFGGFGGGSKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR040107Snu23
IPR022755Znf_C2H2_jaz
IPR003604Matrin/U1-like-C_Znf_C2H2