prot_E-siliculosus-1a_M_contig96.17573.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig96.17573.1
Unique Nameprot_E-siliculosus-1a_M_contig96.17573.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length226
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17573.1 vs. uniprot
Match: A0A6H5L2B2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B2_9PHAE)

HSP 1 Score: 351 bits (901), Expect = 1.270e-113
Identity = 201/226 (88.94%), Postives = 204/226 (90.27%), Query Frame = 0 
Query:    1 MYTRKQRWRRTRTRKQAWGDLPPELLDAMLAAGGGGMPKSVSWDHSYAAGLKIRADRAAEVAHRAAAEDSKLKAAXXXXXXXXXXXXXVEVSIPRSVSCSSLGPKRTLFARTSSSKDELGAAGGGVRRGSSAITAAQHRRRMLPHRRGVSFNTQVKMVLIPKREEFSELERVKLWWGREDYSQFRQVLIDWKRANAHRISHSDNILSINLSDIDEEEESPTGQDHS 226
            MYTRKQRWRRTRTRKQAWGDLPPELLDAMLAAGGG MPKSVSWDHSYAA LKIRADRAAEVAHRAAAEDSKL+AAXXXXXXXXXXXX VEVSIPRS SCSSLGPKRTLF RTSSSKDELGAA               H+RRML HRRGVSFNTQVKMVLIPKREEFSELERVKLWWGREDY+QFRQVLIDWKRANAHRISHSDNILSINLSDIDEEEES TGQDHS
Sbjct:    1 MYTRKQRWRRTRTRKQAWGDLPPELLDAMLAAGGGRMPKSVSWDHSYAARLKIRADRAAEVAHRAAAEDSKLRAAXXXXXXXXXXXX-VEVSIPRSASCSSLGPKRTLFPRTSSSKDELGAAXXXXXXXXXXXXXXXHKRRMLSHRRGVSFNTQVKMVLIPKREEFSELERVKLWWGREDYAQFRQVLIDWKRANAHRISHSDNILSINLSDIDEEEESATGQDHS 225
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BLAST of mRNA_E-siliculosus-1a_M_contig96.17573.1 vs. uniprot
Match: A0A835Z1A2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1A2_9STRA)

HSP 1 Score: 102 bits (254), Expect = 4.420e-22
Identity = 45/75 (60.00%), Postives = 63/75 (84.00%), Query Frame = 0 
Query:  147 RGVSFNTQVKMVLIPKREEFSELERVKLWWGREDYSQFRQVLIDWKRANAHRISHSDNILSINLSDIDEEEESPT 221
            R V+F+ +V++VLIPKR+E ++ +R +LWW R+DY++FRQVLIDWK  NA +IS +DNILSINLSD+D E++ PT
Sbjct:  107 RAVAFDPRVQVVLIPKRDEINDFDRYRLWWSRDDYAKFRQVLIDWKTINADKISPTDNILSINLSDLDAEDDEPT 181
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17573.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2B2_9PHAE1.270e-11388.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z1A2_9STRA4.420e-2260.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig96contigE-siliculosus-1a_M_contig96:187298..192149 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig96.17573.1mRNA_E-siliculosus-1a_M_contig96.17573.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig96 187298..192250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig96.17573.1 ID=prot_E-siliculosus-1a_M_contig96.17573.1|Name=mRNA_E-siliculosus-1a_M_contig96.17573.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=226bp
MYTRKQRWRRTRTRKQAWGDLPPELLDAMLAAGGGGMPKSVSWDHSYAAG
LKIRADRAAEVAHRAAAEDSKLKAAAAAAAVAAAKGKGVEVSIPRSVSCS
SLGPKRTLFARTSSSKDELGAAGGGVRRGSSAITAAQHRRRMLPHRRGVS
FNTQVKMVLIPKREEFSELERVKLWWGREDYSQFRQVLIDWKRANAHRIS
HSDNILSINLSDIDEEEESPTGQDHS
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