prot_E-siliculosus-1a_M_contig96.17572.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig96.17572.1
Unique Name	prot_E-siliculosus-1a_M_contig96.17572.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	409

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig96.17572.1 vs. uniprot
Match: D8LQA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA1_ECTSI)

HSP 1 Score: 528 bits (1361), Expect = 6.690e-184
Identity = 322/386 (83.42%), Postives = 325/386 (84.20%), Query Frame = 0

Query:   36 NVPEGTDEGQKEEARIGEEVXXXXXXXXXXACARASFSVGGSGLAGGGGPDWSPNGGANGTFPLRRALTFGEVGGGHSPSSPADSGGGRLREVPLSEAQAMAESLRTWRQSFDVRNAFFGGESGDGDAEEDRGRAVSLQVQSRSFARRGRATALVTSRTKWTSDVVGGGEGSSSVEAKGLGLEPGGRSGGEEGSGAMAXXXXXXXXXXXXXXG-CVDRGQRQDGVGEKTHRTLSDQEWSSSRRIVEMAASEAASLTNPVMAAFERERKEAAARQAEIEDAQAARAAAMVKQAXAAAKAGNDEV------------APEDDGELHVGSVVRLGLNDAPGSAAVASAAGLRIAAEGISNLSLRSRDSVENLQERGEQSWGPLPLSSSA 408
            +VPEGTDEGQKEEARIG+EV           CARASFSVGGSGLAGGGGPDWSPNGGANGTFPLRRALTFGEVGGGH P SPADSGGGRLREVPLSEAQAMAESLR WRQSFDVRNAFFG ESGDGDAEEDRGRAVSLQVQSRSFARRGRATALVTSRTKWTSDVVGGGEGSS VEAKGLGLE GGRSGGEEGSGAMA XXXXXXXXXXXXX  CVDRGQRQDGVGEKTHRTLSDQEWSSSRRIVEMAASEAASLTNPVMAAFERERKEAAARQAE+EDAQ           X                        EDDGELHVGSVVRLGLNDAPGS      AGLRIAAEGISNLSLRSRDSVENLQERGEQSWGPLPLSSSA
Sbjct:   94 DVPEGTDEGQKEEARIGKEVVGSGGGKKRRPCARASFSVGGSGLAGGGGPDWSPNGGANGTFPLRRALTFGEVGGGHGPCSPADSGGGRLREVPLSEAQAMAESLRAWRQSFDVRNAFFG-ESGDGDAEEDRGRAVSLQVQSRSFARRGRATALVTSRTKWTSDVVGGGEGSSGVEAKGLGLELGGRSGGEEGSGAMAGXXXXXXXXXXXXXXXCVDRGQRQDGVGEKTHRTLSDQEWSSSRRIVEMAASEAASLTNPVMAAFERERKEAAARQAEVEDAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTAEDDGELHVGSVVRLGLNDAPGSXXXXXXAGLRIAAEGISNLSLRSRDSVENLQERGEQSWGPLPLSSSA 478

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig96.17572.1 vs. uniprot
Match: A0A6H5L2B2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B2_9PHAE)

HSP 1 Score: 499 bits (1285), Expect = 3.830e-168
Identity = 319/389 (82.01%), Postives = 329/389 (84.58%), Query Frame = 0

Query:   33 GQGNVPEGTDEGQKEEARIGEEVXXXXXXXXXXA-CARASFSVGGSGLAGGGGPDWSPNGGANGTFPLRRALTFGEVGGGHSPSSPADSGGGRLREVPLSEAQAMAESLRTWRQSFDVRNAFFGGESGDGDAEEDRGRAVSLQVQSRSFARRGRATALVTSRTKWTSDVVGGGEGSSSVEAKGLGLEPGGRSGGEEGSGAMAXXXXXXXXXXXXXXGCVDRGQRQDGVGEKTHRTLSDQEWSSS-RRIVEMAASEAASLTNPVMAAFERERKEAAARQAEIEDAQAARAAAMVKQAXAAAKAGNDEVAP-----------EDDGELHVGSVVRLGLNDAPGSAAVASAAGLRIAAEGISNLSLRSRDSVENLQERGEQSWGPLPLSSSA 408
            G G+VP+GTDE QK         XXXXXXXXXX  CARASFSVG SGLAGGGGPDWSPNGGANGTFPLRRALTFGEVGGGHSPSSPADSGG RL+EVPLSEAQAMAESLR WRQSFDVRNA FGGESGDGDAEEDR RAVSLQ QSRSFAR GRATAL TS+TKWT+DVVGGGEGSSSVEA GLGL+PGGRSGGEEGSGAM XXXXXXXXXXXXX   VDRGQRQDGVGEKTHRTLSDQEWSSS RR VEMAASEAASLTNPVMAAFER+RKEAAARQAE+               X   KAGN EVAP           EDDGELH+GSVVRLGLNDAPGSA+ ASAAGLRIAAEGISNLSLRSRDSVENLQE GEQSWGPLPLSSSA
Sbjct:  393 GLGDVPQGTDEEQKXXXXXXXXXXXXXXXXXXXXHCARASFSVGESGLAGGGGPDWSPNGGANGTFPLRRALTFGEVGGGHSPSSPADSGGARLKEVPLSEAQAMAESLRAWRQSFDVRNASFGGESGDGDAEEDRDRAVSLQEQSRSFARIGRATALFTSQTKWTTDVVGGGEGSSSVEATGLGLDPGGRSGGEEGSGAMXXXXXXXXXXXXXXGSRVDRGQRQDGVGEKTHRTLSDQEWSSSSRRTVEMAASEAASLTNPVMAAFERKRKEAAARQAEVXXXXXXXXXXXXXXXXXXXKAGNGEVAPAAGAEGAPAAAEDDGELHMGSVVRLGLNDAPGSASAASAAGLRIAAEGISNLSLRSRDSVENLQEMGEQSWGPLPLSSSA 781

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig96.17572.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig96.17572.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LQA1_ECTSI	6.690e-184	83.42	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L2B2_9PHAE	3.830e-168	82.01	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 294..317

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig96	contig	E-siliculosus-1a_M_contig96:185849..187075 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig96.17572.1	mRNA_E-siliculosus-1a_M_contig96.17572.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig96 185849..187075 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig96.17572.1 ID=prot_E-siliculosus-1a_M_contig96.17572.1|Name=mRNA_E-siliculosus-1a_M_contig96.17572.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=409bp
MERERRRQALAPPPPQQQQQQQLEDVVQQAAAGQGNVPEGTDEGQKEEAR
IGEEVVGGGGGKKRRACARASFSVGGSGLAGGGGPDWSPNGGANGTFPLR
RALTFGEVGGGHSPSSPADSGGGRLREVPLSEAQAMAESLRTWRQSFDVR
NAFFGGESGDGDAEEDRGRAVSLQVQSRSFARRGRATALVTSRTKWTSDV
VGGGEGSSSVEAKGLGLEPGGRSGGEEGSGAMAGGGGAASDGSSSGGGCV
DRGQRQDGVGEKTHRTLSDQEWSSSRRIVEMAASEAASLTNPVMAAFERE
RKEAAARQAEIEDAQAARAAAMVKQAAAAAKAGNDEVAPEDDGELHVGSV
VRLGLNDAPGSAAVASAAGLRIAAEGISNLSLRSRDSVENLQERGEQSWG
PLPLSSSA*