prot_E-siliculosus-1a_M_contig96.17567.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig96.17567.1
Unique Nameprot_E-siliculosus-1a_M_contig96.17567.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length158
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig96.17567.1 vs. uniprot
Match: D8LQA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA5_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 3.300e-97
Identity = 153/157 (97.45%), Postives = 153/157 (97.45%), Query Frame = 0 
Query:    1 MSTSGNSPEDIDEVRQRLMASSNYNEMVGRIEGNSPFLEAGDKGSAKEGEESPILPVLRQTVRVVVDVAIGLVPVVLVVTYVKFPPPLLEALGSAATAIKGSPLEPVLEALPWEPAVVLKWAAQGGVAVLLSPVTDRLVVSPAIHQWVQAKLRSLSS 157
            MSTSGNSPEDIDEVRQRLMASSNYNEMVGRIEGNSPFLEAGDKGSAKEGEESPILPVLRQTVRVVVDVAI LVPVVLVVTY K PPPLLEALGSAAT IKGSPLEPVLEALPWEPAVVLKWAAQGGVAVLLSPVTDRLVVSPAIHQWVQAKLRSLSS
Sbjct:    1 MSTSGNSPEDIDEVRQRLMASSNYNEMVGRIEGNSPFLEAGDKGSAKEGEESPILPVLRQTVRVVVDVAITLVPVVLVVTYAKLPPPLLEALGSAATTIKGSPLEPVLEALPWEPAVVLKWAAQGGVAVLLSPVTDRLVVSPAIHQWVQAKLRSLSS 157
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig96.17567.1 vs. uniprot
Match: A0A6H5L3V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3V4_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 2.290e-95
Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 0 
Query:    1 MSTSGNSPEDIDEVRQRLMASSNYNEMVGRIEGNSPFLEAGDKGSAKEGEESPILPVLRQTVRVVVDVAIGLVPVVLVVTYVKFPPPLLEALGSAATAIKGSPLEPVLEALPWEPAVVLKWAAQGGVAVLLSPVTDRLVVSPAIHQWVQAKLRSLSS 157
            MST+GNSPEDIDEVRQRLMASS Y+EMVGRIEGNSPFLEAGDKGSAKEGEESPILPVLRQTVRVVVDVA+GLVPVVLVVTY K PPPLLEALGSAATAIKGSPLEPVLEALPWEP VVLKWAAQGGVAVLLSPVTDRLVVSPAIHQWVQAKLRSLSS
Sbjct:   53 MSTAGNSPEDIDEVRQRLMASSKYDEMVGRIEGNSPFLEAGDKGSAKEGEESPILPVLRQTVRVVVDVAVGLVPVVLVVTYAKLPPPLLEALGSAATAIKGSPLEPVLEALPWEPVVVLKWAAQGGVAVLLSPVTDRLVVSPAIHQWVQAKLRSLSS 209
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQA5_ECTSI3.300e-9797.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3V4_9PHAE2.290e-9595.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig96contigE-siliculosus-1a_M_contig96:152969..153940 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig96.17567.1mRNA_E-siliculosus-1a_M_contig96.17567.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig96 151799..153999 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig96.17567.1 ID=prot_E-siliculosus-1a_M_contig96.17567.1|Name=mRNA_E-siliculosus-1a_M_contig96.17567.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=158bp
MSTSGNSPEDIDEVRQRLMASSNYNEMVGRIEGNSPFLEAGDKGSAKEGE
ESPILPVLRQTVRVVVDVAIGLVPVVLVVTYVKFPPPLLEALGSAATAIK
GSPLEPVLEALPWEPAVVLKWAAQGGVAVLLSPVTDRLVVSPAIHQWVQA
KLRSLSS*
back to top