Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17560.1 vs. uniprot
Match:
D8LQB1_ECTSI (INCENP_ARK-bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB1_ECTSI)
HSP 1 Score: 592 bits (1525), Expect = 9.860e-196
Identity = 568/655 (86.72%), Postives = 569/655 (86.87%), Query Frame = 1
Query: 79 MASKTSDQAVGGDAAAVPASPTGSAPVPTAKDSAAAAA-VNAVTDGVAALSVGGSGVAAAV-AAAPPSEKPTSPSKGGFGSPGRHRTPATAKSPSRKASPFAKDSISTPGPSGLKAAAHKAFSRVGVKPPPSANPEVPSPTGSTTQDAFAKFRAMDSNSKKASGSVQSFKLRSPSPKGPLSSAKQXXXXXXXXXXXXXXXXXXQKLDFSGSKASNNXXXXXXXXXXXXXKRGGDAAGSXXEGTPXXXXXXXXXXXXXXXXXXXAKARSLAEKAAADEARRDAQAKAELKARXXXXXXXXEREAKARKLEEEXXXXXXXXXXXXXXXXXXXXXERLAEKAAAAEALRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPVKPPTPPRVAVKPPPTPPRPGNKGQAQAPXXXXXXXXVAAAAPQVPSASSWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRNKKTKGAASTPSPALAXXXXXXXXXXXXXXXXXXXP--TPVKSVPAETKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKSAIPDWARGKALAKILDKQYGGPNPLNPDKIFPEFFTCNLEHIFNTKKQKWDRSSSGNWHTDRLTIAEKLAYQRAMGFDK 2031
MASK S QA+GGDAAAVPASPTGSAPVPTAKDSAAAAA VNAVTDGVAALSVGGSGV A APPSEKPTSPSKGGFGSPGRHRTPATAKSPSRKASPFAKDSISTPGPSGLKAAAHKAFSRVGVKPPPSANPEVPSPTGSTTQDAFAKFRAMDSNSKKASGSVQSFKLRSPSPKGPLSSAKQXXXXXXXXXXXXXX QKLDFSGSKASNNXXXXXXXXXXXXXKRGGDAAGSXXEGTPXXXXXXXXXXXXXXXXXXXAKARSLAEKAA DEARRDAQAKAELKAR XXXX EREAKARKLEEEXXXXXXXXXXXXXXXXXXXXXERLAEKAAAAEALRK XXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PGNKGQAQAPXXXXXXXXVAAAAPQVPSASSWT XXXX IRNKKTKG ASTPS XXXXXXXXXXXXXXXXXXX TPVKSVPAETKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKSAIPDWARGKALAKILDKQYGGPNPLNPDKIFPEFFTCNLEHIFNTKKQKWDRSSSGNWHTDRLTIAEKLAYQRAMGFDK
Sbjct: 1 MASKASGQAIGGDAAAVPASPTGSAPVPTAKDSAAAAAAVNAVTDGVAALSVGGSGVXXXXXATAPPSEKPTSPSKGGFGSPGRHRTPATAKSPSRKASPFAKDSISTPGPSGLKAAAHKAFSRVGVKPPPSANPEVPSPTGSTTQDAFAKFRAMDSNSKKASGSVQSFKLRSPSPKGPLSSAKQXXXXXXXXXXXXXX----QKLDFSGSKASNNXXXXXXXXXXXXXKRGGDAAGSXXEGTPXXXXXXXXXXXXXXXXXXXAKARSLAEKAATDEARRDAQAKAELKAREAAXXXXAEREAKARKLEEEXXXXXXXXXXXXXXXXXXXXXERLAEKAAAAEALRKAEEKKRAERRAALXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------PGNKGQAQAPXXXXXXXXVAAAAPQVPSASSWTPSKSSGSAAEVRQLALAKKKEEIXXXXEEIRNKKTKGTASTPSXXXXXXXXXXXXXXXXXXXXXXXXVATPVKSVPAETKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKSAIPDWARGKALAKILDKQYGGPNPLNPDKIFPEFFTCNLEHIFNTKKQKWDRSSSGNWHTDRLTIAEKLAYQRAMGFDK 630
BLAST of mRNA_E-siliculosus-1a_M_contig96.17560.1 vs. uniprot
Match:
A0A6H5L3Q6_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q6_9PHAE)
HSP 1 Score: 536 bits (1381), Expect = 6.040e-169
Identity = 557/700 (79.57%), Postives = 561/700 (80.14%), Query Frame = 1
Query: 40 PPEPEGSAPRP------------------ADMASKTSDQAVGGDAAAVPASPTGSAPVPTAKDSAAAAAVNAVTDGVAALSVGGSGVAAAVAAAPPSEKP-----------------TSPSKGGFGSPGRHRTPATAKSPSRKASPFAKDSISTPGPSGLKAAAHKAFSRVGVKPPPSANPEVPSPTGSTTQDAFAKFRAMDSNSKKASGSVQSFKLRSPSPKGPLSSAKQXXXXXXXXXXXXXXXXXXQKLDFSGSKASNNXXXXXXXXXXXXXKRGGDAAGSXXEGTPXXXXXXXXXXXXXXXXXXXAKARSLAEKAAADEARRDAQAKAELKARXXXXXXXXEREAKARKLEEEXXXXXXXXXXXXXXXXXXXXXERLAEKAAAAEALRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKP-VKPPTPPRVAVKPPPTPPRPGNKGQAQAPXXXXXXXXVAAAAPQVPSASSWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRNKKTKGAASTPSPALAXXXXXXXXXXXXXXXXXXXPTPVKSVPAETKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKSAIPDWARGKALAKILDKQYGGPNPLNPDKIFPEFFTCNLEHIFNTKKQKWDRSSSGNWHTDRLTIAEKLAYQRAMGFDK 2031
PP P+G+AP+P ADMASK SDQAVGGDAAAVPASPTGSAPVP AKDSAAAAAVNAVTDGVAA SVGGS VA TSPSKGGFGSPGRHRTPATAKSPSRKASPFAKDSISTPGPSGLKAAAHKAFSRVGVK PPSAN E+PSPTGSTTQDAFAKFRAMDSNSKKASGSV SFKLRSPSPKGPLSSAKQXXXXXXXXXXXXXXX QKLDFSGSKASNN KRGGDA GSXX XXXXXXXXXXXXXXXXXXX KARSLAEK AADE XXXXXXXX AKARKLEEEXXXXXXXXXXXXXXXXXXXXXERLAEKAAAAEALR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VKPPTPPRVAVKP TPPRPGNKGQAQAPXXXXXXXX AAAAPQVPSASSWT IRNKKTKG ASTPS XXXXXXXXXXXXXXXXXXX VKSVPAETKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKSAIPDWARGKALAKILDKQYGGPNPLNPDKIFPEFFTCNLEHIFNTKKQKWDRSSSGNWHTDRLTIAEKLAYQRAMGFDK
Sbjct: 349 PPPPKGNAPQPSXTTXXXXXXXXXXXXXXADMASKASDQAVGGDAAAVPASPTGSAPVPIAKDSAAAAAVNAVTDGVAARSVGGSVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPSKGGFGSPGRHRTPATAKSPSRKASPFAKDSISTPGPSGLKAAAHKAFSRVGVKQPPSANSEIPSPTGSTTQDAFAKFRAMDSNSKKASGSVHSFKLRSPSPKGPLSSAKQXXXXXXXXXXXXXXXP--QKLDFSGSKASNNINTPTSSSTSSL-KRGGDAPGSXXXXXXXXXXXXXXXXXXXXXXXXXXKARSLAEKEAADEXXXXXXXXXXXXXXXXXXXXXXXXXAKARKLEEEXXXXXXXXXXXXXXXXXXXXXERLAEKAAAAEALRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKPPTPPRVAVKPXXTPPRPGNKGQAQAPXXXXXXXXXAAAAPQVPSASSWTPSKSSGSAAEVRQLALAKKKEEIAKRMEEIRNKKTKGTASTPSXXXXXXXXXXXXXXXXXXXXXXXXXXVKSVPAETKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKSAIPDWARGKALAKILDKQYGGPNPLNPDKIFPEFFTCNLEHIFNTKKQKWDRSSSGNWHTDRLTIAEKLAYQRAMGFDK 1045
BLAST of mRNA_E-siliculosus-1a_M_contig96.17560.1 vs. uniprot
Match:
D7G3R5_ECTSI (INCENP_ARK-bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3R5_ECTSI)
HSP 1 Score: 115 bits (289), Expect = 4.330e-26
Identity = 46/80 (57.50%), Postives = 65/80 (81.25%), Query Frame = 1
Query: 1786 DKSAIPDWARGKALAKILDKQYGGPNPLNPDKIFPEFFTCNLEHIFNTKKQKWDRSSSGNWHTDRLTIAEKLAYQRAMGF 2025
+ + +P+WA + +A L++QYGG P+NP+KIF +F+TC+LE IF+T K+KWDR S+G+W +DRLTIAEKLAY RAMG+
Sbjct: 38 ESTFVPEWATNEGIAAALERQYGGDKPINPNKIFVDFYTCSLETIFDTNKKKWDRKSTGDWMSDRLTIAEKLAYDRAMGY 117
BLAST of mRNA_E-siliculosus-1a_M_contig96.17560.1 vs. uniprot
Match:
A0A7S2M2L9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M2L9_9STRA)
HSP 1 Score: 95.9 bits (237), Expect = 1.140e-17
Identity = 44/83 (53.01%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 1789 KSAIPDWARGKALAKILDKQYG-GPNPLNPDKIFPEFFTCNLEHIFNTKKQKWDR-SSSGNWHTDRLTIAEKLAYQRAMGFDK 2031
K +P+WA+ L + L++Q+ GPN L+PDKIF E TCNLE IF+ KK ++ R +SSGNW D +TIAEKL Y+R MG+ K
Sbjct: 227 KKKVPEWAQRHNLHRALERQFADGPNRLDPDKIFGEVLTCNLEEIFDKKKSRYQRRTSSGNWTKDHVTIAEKLTYKRTMGYQK 309
BLAST of mRNA_E-siliculosus-1a_M_contig96.17560.1 vs. uniprot
Match:
A0A835ZCU2_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCU2_9STRA)
HSP 1 Score: 97.4 bits (241), Expect = 6.160e-17
Identity = 42/70 (60.00%), Postives = 56/70 (80.00%), Query Frame = 1
Query: 1798 IPDWARGKALAKILDKQYGGPNPLNPDKIFPEFFTCNLEHIFNTKKQKW-DRSSSGNWHTDRLTIAEKLA 2004
IP WARGK L L++Q+GG P+NPD IF EFFTC+L+HIF+T+K+++ RSSSGNW D+LT+ E+LA
Sbjct: 460 IPAWARGKQLEAALERQFGGSAPINPDTIFAEFFTCDLQHIFDTRKKRYVTRSSSGNWLQDKLTLPERLA 529
BLAST of mRNA_E-siliculosus-1a_M_contig96.17560.1 vs. uniprot
Match:
A0A1E7FGC0_9STRA (INCENP_ARK-bind domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FGC0_9STRA)
HSP 1 Score: 84.7 bits (208), Expect = 1.100e-15
Identity = 44/84 (52.38%), Postives = 54/84 (64.29%), Query Frame = 1
Query: 1789 KSAIPDWARGKALAKILDKQYGG---PNPLNPDKIFPEFFTCNLEHIFNTKKQKWDRS--SSGNWHTDRLTIAEKLAYQRAMGF 2025
K IP WA L L+KQY G ++PD+IFPE +C+LE IF TKK K RS SSGNW D++T+AEKL Y+R MGF
Sbjct: 30 KKKIPTWALRANLYPALEKQYNGHIGSRKVDPDEIFPEVQSCDLEAIFGTKKAKAYRSRASSGNWAQDKVTVAEKLVYKREMGF 113
BLAST of mRNA_E-siliculosus-1a_M_contig96.17560.1 vs. uniprot
Match:
A0A7S2S9K2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S9K2_9STRA)
HSP 1 Score: 85.5 bits (210), Expect = 1.320e-14
Identity = 38/83 (45.78%), Postives = 58/83 (69.88%), Query Frame = 1
Query: 1789 KSAIPDWARGKALAKILDKQY-GGPNPLNPDKIFPEFFTCNLEHIFNTKKQKW-DRSSSGNWHTDRLTIAEKLAYQRAMGFDK 2031
K +P+WA L K L++Q+ GP+ ++PD++FP+ TC+LE IF+ KK+++ R+SS NW D ++ AE L Y+R MGFDK
Sbjct: 166 KKKVPEWAMRSNLLKALERQFLDGPDRIDPDQLFPQVTTCDLEAIFDQKKKRYATRTSSANWAKDSVSAAETLVYKRTMGFDK 248
BLAST of mRNA_E-siliculosus-1a_M_contig96.17560.1 vs. uniprot
Match:
K0SBK4_THAOC (SAP domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBK4_THAOC)
HSP 1 Score: 88.6 bits (218), Expect = 4.000e-14
Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = 1
Query: 1789 KSAIPDWARGKALAKILDKQYG-GPNPLNPDKIFPEFFTCNLEHIFNTKKQKWDR-SSSGNWHTDRLTIAEKLAYQRAM 2019
K +P WA+ L + L+KQY GPN L+PDKIF E +CNL+ IF+ KK ++ R +SSGNW D +T EKLAY+RA+
Sbjct: 621 KKTVPQWAQKSNLMRALEKQYADGPNRLDPDKIFGEVLSCNLDEIFDKKKARYQRRTSSGNWSQDHVTAKEKLAYKRAV 699
BLAST of mRNA_E-siliculosus-1a_M_contig96.17560.1 vs. uniprot
Match:
D8LJ56_ECTSI (INCENP_ARK-bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ56_ECTSI)
HSP 1 Score: 84.3 bits (207), Expect = 5.330e-14
Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 1
Query: 1798 IPDWARGKALAKILDKQYGGPNPLNPDKIFPEFFTCNLEHIFNTKKQKWDR-SSSGNWHTDRLTIAEKLAYQRAMGFDK 2031
IP WA+G AL++ L +QY ++PDKIFPE FTC+LE IF K ++ R SS NW DR+T E L Y+R++G K
Sbjct: 195 IPAWAKGSALSEALTRQYATGQKVDPDKIFPEVFTCDLEAIFPVNKSRYHRRGSSANWTPDRVTPQEVLTYKRSVGIAK 273
BLAST of mRNA_E-siliculosus-1a_M_contig96.17560.1 vs. uniprot
Match:
A0A7S3Y2K4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2K4_HETAK)
HSP 1 Score: 80.1 bits (196), Expect = 6.830e-13
Identity = 43/84 (51.19%), Postives = 53/84 (63.10%), Query Frame = 1
Query: 1789 KSAIPDWARGKALAKILDKQYGGPNPLNPDKIFPEFFTCNLEHIFNT----KKQKWD-RSSSGNWHTDRLTIAEKLAYQRAMGF 2025
K IP WARG L + L +Q+ + ++PD IFPE TC LE IF KK K+ R SSGNW D+LT+ EK+ YQRAMGF
Sbjct: 151 KKNIPSWARGAELKEQLCRQF--TDLVDPDSIFPEVSTCVLEDIFQEAAPKKKAKYKARKSSGNWQRDKLTLVEKMDYQRAMGF 232
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17560.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 20
0 1 Expect = 9.86e-196 / Id = 86.72 Expect = 6.04e-169 / Id = 79.57 Expect = 4.33e-26 / Id = 57.50 Expect = 1.14e-17 / Id = 53.01 Expect = 6.16e-17 / Id = 60.00 Expect = 1.10e-15 / Id = 52.38 Expect = 1.32e-14 / Id = 45.78 Expect = 4.00e-14 / Id = 51.90 Expect = 5.33e-14 / Id = 49.37 Expect = 6.83e-13 / Id = 51.19 Sequence D8LQB1_ECTSI A0A6H5L3Q6_9PHAE D7G3R5_ECTSI A0A7S2M2L9_9STRA A0A835ZCU2_9STRA A0A1E7FGC0_9STRA A0A7S2S9K2_9STRA K0SBK4_THAOC D8LJ56_ECTSI A0A7S3Y2K4_HETAK
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig96.17560.1
>prot_E-siliculosus-1a_M_contig96.17560.1 ID=prot_E-siliculosus-1a_M_contig96.17560.1|Name=mRNA_E-siliculosus-1a_M_contig96.17560.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=652bp
MASKTSDQAVGGDAAAVPASPTGSAPVPTAKDSAAAAAVNAVTDGVAALS VGGSGVAAAVAAAPPSEKPTSPSKGGFGSPGRHRTPATAKSPSRKASPFA KDSISTPGPSGLKAAAHKAFSRVGVKPPPSANPEVPSPTGSTTQDAFAKF RAMDSNSKKASGSVQSFKLRSPSPKGPLSSAKQQQQQQQQQQPATGQMPP PQKLDFSGSKASNNNINTPTSSSTSSLKRGGDAAGSGGEGTPSAARARAE AAAKAKSEAEAAKARSLAEKAAADEARRDAQAKAELKAREAALKAAAERE AKARKLEEEERRRKEEDRKRKEADKKRRAAERLAEKAAAAEALRKAEEKK RAEKRAALEQKAAAAAAAAREKAEAAARREEEEAQRVAAAAAAAAAAEAA KPVKPPTPPRVAVKPPPTPPRPGNKGQAQAPPPPTPPRPVAAAAPQVPSA SSWTPSKSSGSAAEARQLALAKKKEEIAKRMEEIRNKKTKGAASTPSPAL AAAAKPPAAAAAPKPVPISVPTPVKSVPAETKEERESYDAYDVEPESGSE SGEEEEEAAQEIQEPQEPSDKSAIPDWARGKALAKILDKQYGGPNPLNPD KIFPEFFTCNLEHIFNTKKQKWDRSSSGNWHTDRLTIAEKLAYQRAMGFD K* back to top mRNA from alignment at E-siliculosus-1a_M_contig96:122682..129233-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig96.17560.1 ID=mRNA_E-siliculosus-1a_M_contig96.17560.1|Name=mRNA_E-siliculosus-1a_M_contig96.17560.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6552bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:122682..129233- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)GGGGACGCCCCTCAGCCTTCCCCGACCACCGCTCCTACGCCTCCGGAGCC
GGAGGGCTCGGCCCCGCGCCCGGCGGAC ATGGCCAGCAAGACGTCCGACC
AGGCCGTCGGCGGCGACGCGGCGGCGGTGCCCGCGTCGCCAACGGGGTCT
GCACCCGTGCCCACTGCCAAGGACTCTGCCGCCGCCGCCGCCGTTAACGC
CGTCACGGACGGTGTCGCCGCGCTCAGTGTAGGCGGCAGCGGGGTCGCGG
CGGCGGTGGCGGCTGCGCCGCCGTCCGAGAAGCCGACGTCGCCCAGCAAG
GGGGGATTCGGCTCGCCTGGGCGGCACAGGACTCCCGCGACGGCCAAGA G
TAAGTGCGAGCGAATGGCTGGCCCGCCTTTTTCGGAGTGTGTTGTGGCCC
GCTGTTGACTGGCAACCAGGTCTTGTCGACCCGGAAGAAAATTCGGGAGG
TGTTCATGTAGCTCTTTTAAGCGGAGTTGGAAATGATGTACAAATGCTAC
CTAACGCCGATTGGGTTGGTGCGGGGGAGCGTAGGACATAGCCAGCACGA
AATGAGCTGGGGGGGACTCTCAGTAGTGCCGCTGCTGTGCACTGGCAACT
TTGACTGCACCAAAGCGGACACGGAACTAATAATCCATGTTCGACAGCAT
ATTTTTTCCCGCCTTCTGCCGCGCCATTTCACCAGCAGTATACTGCTGTG
TCGGTCACCGGTACTACATGTAGTCAACCGGCACTATTGAGTCGCTCGCA
CTGCTGCTGCCAGGGTGCATGCTGTTGTTCTTAAGGACTAGAGTCACGCC
TGTCGTTCCTGTTGCCCCGCATGCGCCGGCCCTAAAAAATGATCCAGGCC
CTTCGCGCAAGGCCAGCCCCTTCGCCAAGGACTCGATATCGACCCCGGGA
CCCTCCGGCCTAAAGGCGGCTGCCCACAAGGCCTTCAGCCGCGTGGGGGT
GAAGCCCCCCCCGTCTGCCAACCCGGAGGTACCGTCACCGACGGGAAGCA
CCACCCAGGACGCTTTTGCCAAGTTCCGCGCCATG GTGAGAGTTTTTTTT
TTTTCTTTTTGATAATGCGGCGCATGGTAGGGTTGGGCAAGGAGTGTAGG
CCGAGGCATGGCGAAGTCGATCGGCCGTTTCCGGGAGTAGTCCTGGCGGT
GGCTGTCTGTGGCTGGTACTATTTTTCGTTTGTTTTATCGTGTGTAGAAC
AGCAATGGCGGTTGGAGTTGGCTGTCACGGCGATATGGGGTCGGAAGCAG
AGGGCAGTTTCGCGGTTTTCCCGCAAATAAACGCGCTCTCGTTTATTTTT
TCAAGCACTGCACCTGTACCAATCGAGTCAACTCTCGTCCCAGAAAGTCC
CCTTGCCGCTTGTCCAACCTAAAAGCATGACGGTGCGCATGCGGTGACTA
CCGGCGTGAGACCTGTGATCTTCATGTGACCTGATGCCCGTGTCTATTGT
TTCTTGCTCACAACGAAAAAGGACTCCAACTCCAAGAAGGCGAGCGGCTC
CGTGCAGTCCTTCAAGCTCCGTTCCCCTTCGCCCAAGGGACCCCTCTCAA
GCGCGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCGCCACCGGA
CAAATGCCCCCCCCCCAGAAGCTGGACTTCAGCGGCAGCAAGGCCTCCAA
CAACAACATCAACACGCCCACCTCGTCCTCTACGTCTTCCCTGAAGCGCG
GCGGCGACGCCGCGGGCAGCGGCGGCGAGGGCACCCCATCGGCGGCCAGA
GCCCGGGCGGAGGCGGCGGCTAAGGCTAAGTCGGAGGCCGAGGCGGCGAA
GGCGAGGTCGCTGGCGGAGAAGGCGGCGGCGGACGAGGCCCGGCGCGACG
CCCAGGCGAAGGCGGAGCTCAAGGCCCGCGAGGCGGCCCTGAAGGCGGCC
GCCGAGAGGGAGGCCAAGGCCCGCAAGCTGGAGGAGGAGGAGAGGAGGAG
GAAGGAGGAGGACCGGAAGAGGAAGGAGGCCGACAAGAAGAGGCGCGCCG
CGGAGAGGCTGGCGGAGAAGGCGGCCGCGGCTGAGGCCCTCCGGAAGGCC
GAGGAGAAGAAGCGGGCCGAGAAGCGTGCGGCCTTGGAGCAGAAGGCGGC
GGCAGCGGCGGCGGCCGCGAGGGAGAAGGCCGAGGCTGCTGCTCGCAGGG
AAGAGGAGGAGGCTCAGCGGGTTGCCGCTGCGGCAGCGGCGGCGGCGGCG
GCGGAAGCGGCGAAGCCGGTCAAGCCGCCGACGCCCCCGCGTGTGGCGGT
GAAGCCCCCGCCGACTCCGCCCCGCCCCGGAAACAAGGGCCAGGCGCAGG
CGCCGCCGCCGCCTACGCCTCCGCGGCCGGTGGCAGCGGCGGCCCCGCAG
GTGCCCTCGGCGTCGTCTTGGACGCCCTCGAAATCATCGGGAAGCGCGGC
AGAGGCCCGCCAGCTTGCGCTCGCGAAGAAGAAGGAGGAGATCGCCAAGA
G GTGCGGCGTCATTTGTTTGTTGGGTGCTAGGGTTAAGGTGTCTATGTAC
GCTGAATATAGAAACCGCATGCATTGTTTGTTGGTTCGAACCGCATGCAT
GCATGGAGGGTTGGGCTTGTGCGACACCCCAGCCGCGTAGAATTGCTTTT
CTTCGTTAGGAGGCGTGGGGTGAGCTCTGTTCGGACCAACCAGTCATGGC
TTGATTTCATGATCCAGAACCGTCCGATGATTTGTGAGCTTGGGACTCGT
AACCGTCGTCCGTTACCAACGGCCTGGCCTTATTTCCTTTCCATCTCTCT
CCTGCCCCCTGATTCACATGGAACGATCGACACACATCAGGATGGAGGAG
ATCAGGAACAAGAAGACGAAGGGCGCCGCTTCCACGCCATCCCCGGCCCT
AGCTGCGGCGGCGAAGCCTCCGGCCGCTGCCGCCGCCCCCAAGCCCGTTC
CCATCTCCGTGCCTACCCCGGTCAAGTCCGTCCCGGCGGAAACCAAGGAA
GAGCGCGAGAGCTACGACGCCTACGATGTCGA GTGAGTATAGCGTCATTC
GCAAGTAGTTCCTTTCGAGTTGCCCACGTATCCCTTTCGATTTCCAGGCG
GCGTTTGCCGGGAGTTGTGGGATTGGAGTATTAGTTCGTCCCCCGGGGGA
CCGTGGTGGCTGGTGTCCAAGGAAGCATGTCCCGTGTTTATGCCACGTAT
GTACGGCGTGGTTCTCCGTAGGGAGATGGTACCTAAAGTCATCTACCTTT
GGCGAGCCCAGAACAGGGCGGGTGTCGTTCAGCTCGGAGCTGTACAGAAC
GAACGCTATGCTGTACGTCCGTCTTCGTGTATCCCCCTACCTCGCACCAC
CTCTATCTCATCGAGAATATGCTACGTCTTTCCTGTACCTGTTTTGCTGT
GAACTTTCTTTCGTCAAGGCCGGAGTCCGGGTCTGAGTCGGGAGAGGAGG
AGGAGGAGGCGGCGCAGGAGATTCAAGAGCCGCAAGAGCCCAGCGACAA G
TAAGACTCAAACACCGTGGGCATGGGCTTTGTTTACCTAGCCACACCAAA
AGTGGCGGGTAACATGTAGAAGGACAGACGCGTTACCGAGGGCGACAACC
ACCACCGTATGCATACTACCTGTTGGAGAGAGAAGTACGACGTCGAGTTG
TTGTAAGGGGATTCTGTTCCTGGATTTTGCTTGTGTGAGCGCGCCGTGTC
ATTTCCGGAATGCGCAAGTTGGCCTGCGCACGTGGGGCTAGACTAAGCGG
CTGGATTGTATCTGGCCAGGCTTGCTGTACGTCGTGATCGGGGTGGGCGT
GGGATGATCGAGTTGCGTGCGTCCCTTGTGTTTGATTTTGTGCGCCTAGT
TTCACGTTAGTGGAAGATAATTGCGCGCGTGAGGTTAATTCGGTACCCTG
CCTTCATCATGTGTTCCGCGCCGTCTGCGTTGACGATCCCACCACTCGCT
GTTCTTGCTCGATGTCTGTCCCGAAAAGGAGCAGCACCGTTCATCTGGCG
CACACACACTTCTCTATGAAACCCGCTTGCCGTTCGCCCTTGTTCTTTGA
CCTCCTTGGGGTAGGAAGCTCGGTCGTTTCCGGCTATTATTATTTTTCGT
CCGTCGACGCCGCCCTCCTCTTCCTCTCGTGCGCGCAAGCTCCTCCCCAC
CGTCTAGCGGCTGGCAGCAATCAATCGTTGTTGTGGTTGATATCCCTGAT
GTCGTCCTTCCCCGTCGTGTGTATGTAGCTGCTATTGTCTCTCCTGATAG
GTAGCTGTCGCCGTTCTCTATCTGTAACGATTTAGTGATGGTTTTTCTGC
CCTCGTCTGCAACGGCGGCGCACGCGCGCGTCGTCATCATGCGTCCCGTC
TTCGTGCCTTTTAGGTCCGCGATTCCCGACTGGGCCCGCGGCAAGGCTCT
CGCCAAGATCCTGGACAAGCAGTACGGTGGCCCGAACCCCCTCAACCCGG
ACAAGATATTCCCGGAGTTCTTCACGTGCAACCTCGAGCACATCTTCAAC
ACCAAGAAGCAGAAGTGGGACCGCAGCAGCAG GTGCGCTCGAAGCTGGTG
TTTCGCTGTTGTGCATGTAGCGCGCTTAGATAAGTTGTATGGGTTAGGAC
CGAGGGATGACAGGTGGGTGAGGGATCACGCAAACAGCAGTTAGTGCGCT
GATGGTACATGCCGCCGTGTTCATGTGTCAGTTGTGTCTCCTCCCAGACT
AGCAAGTCGTCGGCGAGTTCGTCTGTTGCAGCGAGTTCACTTGTATGAAT
CAGACCAAAAGATGAAACCTGATGGTATGTGTGTATCATTGCATCTTCCT
ATTCTTTTTTTTCTGTTGCATAACTGACCTTCCGTGAAATCGTGTGCGAA
GATATCTGTACGACCCCGTTGTTTTAACTACAGGTAGGGTATTGCTGCAT
ATGTTGCTGGTGTGGCGTCGGTGCACGCGTGTGTGCGTGTTACATACTGG
ATGCACCCCGGCCCCGTAGCAAGTCAGCCAATCCAACCGTCTCCTGTTTT
CCTCGCCGTAACTCATCACCCCACCCTTACCTTGTCGGCGTCGTCTCTAC
GATTGAATGTTTGCTCTTGTTTTGCAGCGGAAACTGGCACACCGACCGCC
TTACCATCGCCGAGAAGCTCGCCTACCAGCGCGCCATGGGCTTCGACAAA
TAA GACCAGAGATCTCATGCTAGCCCTTTGGATCGACAGGCTTTTATGTC
TTGTGGTTGCACGTAGCCGTTCATTTATCTGTGTGTCGAAGGGAGAATTG
TGTTGGTCTTGTTTGGGAAGAAGAGTCCTGCCGGCCGCCTTTCTTCGCTA
GTAGAGCAGGCGGAGTGACAAGCCTAGATATATGGGTATAAACACCGCCC
TTATCCTAGCGCATTGTTCGACCTGCTGAGTTTCAGGGGCAGAGAGAGGG
GGGGTGGGGATTCTGTCGTTGGCACCTACCTTGCCGGGGGGGTTGTTAAG
CGACCGAGAGAGAGAAAGAGTACTTGAAGGGACCTGAAAATTGTGGGATC
TGCTCTGCTGCATGGGGAGCGGGGAAGGTCACCGTCGTAGCTCCTCGATG
AAGGGCACTGCTGTGTGTAGTTTCGTTATGAATGTTGACGCGTTGACTCG
ATCGGGCTACTGGTAGGCCCTTGGGGGCGACGTGGAATGCAAGATGATGG
AATGCCGACCGCGGACTATGTTGTTGATCGATTGTTTACTGGAGTTTGAG
GTGGAAGTTGTCCTGTCCTCCTTTCAGTTGTGGGTTGGACGGGGCCGTTA
TTCGCTGGCAGCTTAAGTCGGTATGGGGGCTTTTTGTGCTTCTTGTGGTG
AAATCAGTGGGTTGCGGTAGCACGTAGCTAACGTATTCATTCGTAAGAAG
CAACAAGGAGAGCGTTGTGTATGCATATGACTGATCAATTTGTTGCAAGA
CAGAAGACACATTCGAGGTGCGTGTGAGCAAATTATTTTCTCCACCAAAC
AAGAAGAACTCTCATTGTGGTTATGTATGTGGCTTGGTTATCCGAATCTG
AAGTGAAGTGGGCGTGCAATCCACAAACAAATCTCGTTTGAATACAGTTA
CTGAGTAGTTCAAATCTACGGCGGACGAGGTTCGACGGGATGCATGCGTG
TTGGCGTGCCGGCCGTGAGTGGCGGGGGGCGCGGGCGGGCACGGGCAAGG
ATAGCAACGCGAGTAGGTATGGATCTGATTTCCATGTGACGGCTTGGTTG
ACGGTGTGCCTACCTCGTGAGTTCTTTGCCTCTCCCGGTGGTAGGATATA
TATATATGTGTGTGTTGACGACCACGGACGACGTACGTGCGGTTGGGGGG
GTTAGTCACGGGAGAGGGTAGTCGAGGGAGGTTAGTTGTTGGGATTAGAA
CGCAATGGTTTGTTCTGTCTCTTCAAGTTTCTGTCATCCACCATCCATCC
ATGTCGTACTGTGGATGATAGTAAGCTGTCGGAACGCAACTTGTTTGTGA
GGGAAGGGTGTGTGTGTGTTTTTATTATTGGCATCGACCGCGCTAACCGG
CTGACCAATGAAAAGACGTCAGTCTTAGTGCGGTTGAAAACACAAAACAC
TTCTATCTACCATGAACTGGGACCCCGTGAGGGGGCAGCATGGGGGAGGC
TA back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:122682..129233-
>mRNA_E-siliculosus-1a_M_contig96.17560.1 ID=mRNA_E-siliculosus-1a_M_contig96.17560.1|Name=mRNA_E-siliculosus-1a_M_contig96.17560.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3912bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:122682..129233- (Ectocarpus siliculosus Ec864m_EcPH12_78m male) ATGGCCAGCAAGACGTCCGACCAGGCCGTCGGCGGCGACGCGGCGGCGGT GCCCGCGTCGCCAACGGGGTCTGCACCCGTGCCCACTGCCAAGGACTCTG CCGCCGCCGCCGCCGTTAACGCCGTCACGGACGGTGTCGCCGCGCTCAGT GTAGGCGGCAGCGGGGTCGCGGCGGCGGTGGCGGCTGCGCCGCCGTCCGA GAAGCCGACGTCGCCCAGCAAGGGGGGATTCGGCTCGCCTGGGCGGCACA GGACTCCCGCGACGGCCAAGAATGGCCAGCAAGACGTCCGACCAGGCCGT CGGCGGCGACGCGGCGGCGGTGCCCGCGTCGCCAACGGGGTCTGCACCCG TGCCCACTGCCAAGGACTCTGCCGCCGCCGCCGCCGTTAACGCCGTCACG GACGGTGTCGCCGCGCTCAGTGTAGGCGGCAGCGGGGTCGCGGCGGCGGT GGCGGCTGCGCCGCCGTCCGAGAAGCCGACGTCGCCCAGCAAGGGGGGAT TCGGCTCGCCTGGGCGGCACAGGACTCCCGCGACGGCCAAGAGCCCTTCG CGCAAGGCCAGCCCCTTCGCCAAGGACTCGATATCGACCCCGGGACCCTC CGGCCTAAAGGCGGCTGCCCACAAGGCCTTCAGCCGCGTGGGGGTGAAGC CCCCCCCGTCTGCCAACCCGGAGGTACCGTCACCGACGGGAAGCACCACC CAGGACGCTTTTGCCAAGTTCCGCGCCATGGCCCTTCGCGCAAGGCCAGC CCCTTCGCCAAGGACTCGATATCGACCCCGGGACCCTCCGGCCTAAAGGC GGCTGCCCACAAGGCCTTCAGCCGCGTGGGGGTGAAGCCCCCCCCGTCTG CCAACCCGGAGGTACCGTCACCGACGGGAAGCACCACCCAGGACGCTTTT GCCAAGTTCCGCGCCATGGACTCCAACTCCAAGAAGGCGAGCGGCTCCGT GCAGTCCTTCAAGCTCCGTTCCCCTTCGCCCAAGGGACCCCTCTCAAGCG CGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCGCCACCGGACAA ATGCCCCCCCCCCAGAAGCTGGACTTCAGCGGCAGCAAGGCCTCCAACAA CAACATCAACACGCCCACCTCGTCCTCTACGTCTTCCCTGAAGCGCGGCG GCGACGCCGCGGGCAGCGGCGGCGAGGGCACCCCATCGGCGGCCAGAGCC CGGGCGGAGGCGGCGGCTAAGGCTAAGTCGGAGGCCGAGGCGGCGAAGGC GAGGTCGCTGGCGGAGAAGGCGGCGGCGGACGAGGCCCGGCGCGACGCCC AGGCGAAGGCGGAGCTCAAGGCCCGCGAGGCGGCCCTGAAGGCGGCCGCC GAGAGGGAGGCCAAGGCCCGCAAGCTGGAGGAGGAGGAGAGGAGGAGGAA GGAGGAGGACCGGAAGAGGAAGGAGGCCGACAAGAAGAGGCGCGCCGCGG AGAGGCTGGCGGAGAAGGCGGCCGCGGCTGAGGCCCTCCGGAAGGCCGAG GAGAAGAAGCGGGCCGAGAAGCGTGCGGCCTTGGAGCAGAAGGCGGCGGC AGCGGCGGCGGCCGCGAGGGAGAAGGCCGAGGCTGCTGCTCGCAGGGAAG AGGAGGAGGCTCAGCGGGTTGCCGCTGCGGCAGCGGCGGCGGCGGCGGCG GAAGCGGCGAAGCCGGTCAAGCCGCCGACGCCCCCGCGTGTGGCGGTGAA GCCCCCGCCGACTCCGCCCCGCCCCGGAAACAAGGGCCAGGCGCAGGCGC CGCCGCCGCCTACGCCTCCGCGGCCGGTGGCAGCGGCGGCCCCGCAGGTG CCCTCGGCGTCGTCTTGGACGCCCTCGAAATCATCGGGAAGCGCGGCAGA GGCCCGCCAGCTTGCGCTCGCGAAGAAGAAGGAGGAGATCGCCAAGAGGA CTCCAACTCCAAGAAGGCGAGCGGCTCCGTGCAGTCCTTCAAGCTCCGTT CCCCTTCGCCCAAGGGACCCCTCTCAAGCGCGAAGCAGCAGCAGCAGCAG CAGCAGCAGCAGCAGCCCGCCACCGGACAAATGCCCCCCCCCCAGAAGCT GGACTTCAGCGGCAGCAAGGCCTCCAACAACAACATCAACACGCCCACCT CGTCCTCTACGTCTTCCCTGAAGCGCGGCGGCGACGCCGCGGGCAGCGGC GGCGAGGGCACCCCATCGGCGGCCAGAGCCCGGGCGGAGGCGGCGGCTAA GGCTAAGTCGGAGGCCGAGGCGGCGAAGGCGAGGTCGCTGGCGGAGAAGG CGGCGGCGGACGAGGCCCGGCGCGACGCCCAGGCGAAGGCGGAGCTCAAG GCCCGCGAGGCGGCCCTGAAGGCGGCCGCCGAGAGGGAGGCCAAGGCCCG CAAGCTGGAGGAGGAGGAGAGGAGGAGGAAGGAGGAGGACCGGAAGAGGA AGGAGGCCGACAAGAAGAGGCGCGCCGCGGAGAGGCTGGCGGAGAAGGCG GCCGCGGCTGAGGCCCTCCGGAAGGCCGAGGAGAAGAAGCGGGCCGAGAA GCGTGCGGCCTTGGAGCAGAAGGCGGCGGCAGCGGCGGCGGCCGCGAGGG AGAAGGCCGAGGCTGCTGCTCGCAGGGAAGAGGAGGAGGCTCAGCGGGTT GCCGCTGCGGCAGCGGCGGCGGCGGCGGCGGAAGCGGCGAAGCCGGTCAA GCCGCCGACGCCCCCGCGTGTGGCGGTGAAGCCCCCGCCGACTCCGCCCC GCCCCGGAAACAAGGGCCAGGCGCAGGCGCCGCCGCCGCCTACGCCTCCG CGGCCGGTGGCAGCGGCGGCCCCGCAGGTGCCCTCGGCGTCGTCTTGGAC GCCCTCGAAATCATCGGGAAGCGCGGCAGAGGCCCGCCAGCTTGCGCTCG CGAAGAAGAAGGAGGAGATCGCCAAGAGGATGGAGGAGATCAGGAACAAG AAGACGAAGGGCGCCGCTTCCACGCCATCCCCGGCCCTAGCTGCGGCGGC GAAGCCTCCGGCCGCTGCCGCCGCCCCCAAGCCCGTTCCCATCTCCGTGC CTACCCCGGTCAAGTCCGTCCCGGCGGAAACCAAGGAAGAGCGCGAGAGC TACGACGCCTACGATGTCGAGATGGAGGAGATCAGGAACAAGAAGACGAA GGGCGCCGCTTCCACGCCATCCCCGGCCCTAGCTGCGGCGGCGAAGCCTC CGGCCGCTGCCGCCGCCCCCAAGCCCGTTCCCATCTCCGTGCCTACCCCG GTCAAGTCCGTCCCGGCGGAAACCAAGGAAGAGCGCGAGAGCTACGACGC CTACGATGTCGAGCCGGAGTCCGGGTCTGAGTCGGGAGAGGAGGAGGAGG AGGCGGCGCAGGAGATTCAAGAGCCGCAAGAGCCCAGCGACAAGCCGGAG TCCGGGTCTGAGTCGGGAGAGGAGGAGGAGGAGGCGGCGCAGGAGATTCA AGAGCCGCAAGAGCCCAGCGACAAGTCCGCGATTCCCGACTGGGCCCGCG GCAAGGCTCTCGCCAAGATCCTGGACAAGCAGTACGGTGGCCCGAACCCC CTCAACCCGGACAAGATATTCCCGGAGTTCTTCACGTGCAACCTCGAGCA CATCTTCAACACCAAGAAGCAGAAGTGGGACCGCAGCAGCAGGTCCGCGA TTCCCGACTGGGCCCGCGGCAAGGCTCTCGCCAAGATCCTGGACAAGCAG TACGGTGGCCCGAACCCCCTCAACCCGGACAAGATATTCCCGGAGTTCTT CACGTGCAACCTCGAGCACATCTTCAACACCAAGAAGCAGAAGTGGGACC GCAGCAGCAGCGGAAACTGGCACACCGACCGCCTTACCATCGCCGAGAAG CTCGCCTACCAGCGCGCCATGGGCTTCGACAAATAACGGAAACTGGCACA CCGACCGCCTTACCATCGCCGAGAAGCTCGCCTACCAGCGCGCCATGGGC TTCGACAAATAA back to top