Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match:
A0A6H5LNG1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNG1_9PHAE)
HSP 1 Score: 534 bits (1375), Expect = 1.210e-182
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 2
Query: 515 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSLEPGTSN 1303
MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSLEPGTSN
Sbjct: 1 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSLEPGTSN 263
BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match:
D7G3N5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3N5_ECTSI)
HSP 1 Score: 465 bits (1196), Expect = 4.670e-162
Identity = 229/230 (99.57%), Postives = 230/230 (100.00%), Query Frame = 2
Query: 515 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAE 1204
MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPG+SRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAE
Sbjct: 1 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGISRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAE 230
BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match:
A0A835Z323_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z323_9STRA)
HSP 1 Score: 446 bits (1148), Expect = 2.320e-151
Identity = 211/260 (81.15%), Postives = 241/260 (92.69%), Query Frame = 2
Query: 515 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSLEPG 1294
MSSM+LS Q+NE+LFVGFNQD GCFACGTDNGFRIYNVDPFRETFRRVFS G+GIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQ+RCIGELSFRSEVKAV+LRRDRVVV LA +IYVYRFSDL LLD+INTI+N+ GL+ALC D+SNMVLACPG+SRGHVNVELYD R+STL+PAHES+LAQLAL+ DG +VATAS +GTL+RVFDT +G+L+ ELRRGMDRA+++SICFNQ S+++ACCSDRGTVHIF L+ G
Sbjct: 1 MSSMNLSKEQENEILFVGFNQDSGCFACGTDNGFRIYNVDPFRETFRRVFS-AGVGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVALAHKIYVYRFSDLKLLDQINTIKNESGLLALCPDSSNMVLACPGISRGHVNVELYDTRKSTLVPAHESDLAQLALNSDGSLVATASDKGTLIRVFDTSSGALVQELRRGMDRADITSICFNQTSSYLACCSDRGTVHIFDLKGG 259
BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match:
A0A4D9CZG2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZG2_9STRA)
HSP 1 Score: 417 bits (1072), Expect = 3.310e-140
Identity = 198/257 (77.04%), Postives = 230/257 (89.49%), Query Frame = 2
Query: 515 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSL 1285
MSSMSL+ +Q+NELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRR+F NGGIGIVEMLFR NL+ALVGGGRNPR+PPNKVMIWDDHQ+RC+GELSFRSEVKAV+LRRDRVVVVL +IYVYRF DLHL D+++T+ N +GLVALC D +N VLACPG+++G V VELYD R+STLIPAHESELAQ+AL++DG +ATAS +GTL+RVFDT +G LL ELRRGMDRAE+ S+ FN STFVAC S +GTVHIF++
Sbjct: 1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALCPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFAV 257
BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match:
W7U6T1_9STRA (Wd repeat domain phosphoinositide-interacting protein 3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6T1_9STRA)
HSP 1 Score: 413 bits (1062), Expect = 6.760e-139
Identity = 197/257 (76.65%), Postives = 229/257 (89.11%), Query Frame = 2
Query: 515 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSL 1285
MSSMSL+ +Q+NELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRR+F NGGIGIVEMLFR NL+ALVGGGRNPR+PPNKVMIWDDHQ+RC+GELSFRSEVKAV+LRRDRVVVVL +IYVYRF DLHL D+++T+ N +GLVAL D +N VLACPG+++G V VELYD R+STLIPAHESELAQ+AL++DG +ATAS +GTL+RVFDT +G LL ELRRGMDRAE+ S+ FN STFVAC S +GTVHIF++
Sbjct: 1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALSPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFAV 257
BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match:
A0A067CH88_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CH88_SAPPC)
HSP 1 Score: 392 bits (1008), Expect = 2.060e-131
Identity = 184/257 (71.60%), Postives = 221/257 (85.99%), Query Frame = 2
Query: 515 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSL 1285
M++M+LS Q+NELLFVGFNQDYGCFACGTD GFRIYN DPF+ETFRR FS+GGIGIVEMLFRCN+LA+VGGGRNPRYPPNKVMIWDDHQSR IGELSFRSEVKAV+LRRDRVVVVL +IYVY F+DL LLD I TI N +GLVALC ++N VLACPGVSRG V +ELYD R++TLI AHE++L+Q+ L+++G +ATAS +GTL+R+FDT +G L ELRRG D+AE+ S+CF+ S ++AC SD+ TVHIF+L
Sbjct: 1 MAAMNLSREQQNELLFVGFNQDYGCFACGTDTGFRIYNCDPFKETFRRDFSSGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFADLKLLDHIETIANPKGLVALCPSSTNTVLACPGVSRGTVRIELYDQRKTTLITAHEADLSQMCLNLEGTRLATASDKGTLIRIFDTQSGQLTQELRRGADKAEIYSVCFSPNSQYLACSSDKHTVHIFAL 257
BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match:
A0A485KXM0_9STRA (Aste57867_13230 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KXM0_9STRA)
HSP 1 Score: 394 bits (1012), Expect = 4.930e-131
Identity = 188/263 (71.48%), Postives = 226/263 (85.93%), Query Frame = 2
Query: 506 AREMSSMSLSNNQKNELLFVGFNQDYG---CFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSL 1285
+R MSSM+LS Q+NELLFVGFNQDYG CFACGTD GFRIYN DPF+ETFRR FS+GGIGIVEMLFRCN+LA+VGGGRNPRYPPNKVMIWDDHQSR IGELSFRSEVKAV+LRRDRVVVVL +IYVY FSDL LLD I TI N +GL ALC +++N VLACPGVSRG V +ELYD+R++TLI AHE++L+Q+AL+++G +AT+S +GTL+RVFDT +G L+ ELRRG D+AE+ S+CF+ S ++AC SD+ TVHIF+L
Sbjct: 39 SRPMSSMNLSREQQNELLFVGFNQDYGTMRCFACGTDTGFRIYNCDPFKETFRRDFSSGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFSDLKLLDHIETITNPKGLCALCPNSTNTVLACPGVSRGTVRIELYDMRKTTLITAHEADLSQMALNLEGTRLATSSDKGTLIRVFDTQSGQLMQELRRGADKAEIYSVCFSPNSQYLACSSDKYTVHIFAL 301
BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match:
A0A7S3JWF9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWF9_9STRA)
HSP 1 Score: 383 bits (984), Expect = 7.830e-127
Identity = 177/249 (71.08%), Postives = 217/249 (87.15%), Query Frame = 2
Query: 542 QKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSLE 1288
+K+ELLFV FNQD+GCFACGT++GFRIYNVDPF+ETFRR F GGIGIVEMLFRCNLLALVGGG +PRYPPNKVMIWDDHQ+RCIGELSFRSEVKAV+LRRDRVVV LA ++YVYRFSDL LLD+I+T N +GL ALCAD ++ VLACPGV++GHV +ELYD R+ST++ AHES+L +LAL+ DG +VATAS +GTL+R+FDT TG+ + ELRRG+DRA + +I F+ S +VAC SD+GT H+FS++
Sbjct: 16 EKSELLFVSFNQDFGCFACGTESGFRIYNVDPFKETFRRAFRGGGIGIVEMLFRCNLLALVGGGSSPRYPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVALATKVYVYRFSDLKLLDQISTQVNSRGLAALCADPAHNVLACPGVNKGHVRIELYDSRKSTIVAAHESDLCRLALNSDGSLVATASDKGTLVRIFDTHTGAQVRELRRGVDRAIIYAIAFDPDSKYVACTSDKGTAHVFSIQ 264
BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match:
A0A7S2CPD6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPD6_9STRA)
HSP 1 Score: 380 bits (976), Expect = 7.760e-126
Identity = 179/250 (71.60%), Postives = 218/250 (87.20%), Query Frame = 2
Query: 551 ELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSLEPGTS 1300
ELL++GFNQD+GCFACG DNGFRIYN +PF+ETFRR GGIGIVEMLFRCNLLALVGGGRNP++PPN V IWDDHQ+R IGEL FRSEVKAV+LRRDRVVVVL +IYVYRFSDL LLD+I+T++N +GL+ALC DASN+VLACPGV++G+V VELYD+R+S++IPAHESEL+Q+AL++DG +ATAS +GTL+RVFDT TG +L ELRRGMDRA + + FN+ S F+AC SD+GTVHIF+L T+
Sbjct: 8 ELLYLGFNQDHGCFACGMDNGFRIYNCEPFKETFRRAMK-GGIGIVEMLFRCNLLALVGGGRNPKFPPNIVKIWDDHQNRAIGELMFRSEVKAVKLRRDRVVVVLLHKIYVYRFSDLKLLDQISTLKNPKGLIALCPDASNVVLACPGVTKGNVRVELYDMRKSSIIPAHESELSQIALNLDGTRLATASDKGTLIRVFDTHTGDILKELRRGMDRAVIHCVTFNKTSDFLACSSDKGTVHIFALGDKTA 256
BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match:
F0Y5R4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5R4_AURAN)
HSP 1 Score: 370 bits (949), Expect = 1.660e-123
Identity = 179/233 (76.82%), Postives = 206/233 (88.41%), Query Frame = 2
Query: 596 CGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSLEPG 1294
CGT++GFRIYNVDPF+ETFRRVFS GG+G+VEMLFRCNLLALVGGGR+PRYPPNKVMIWDDHQ+RCIGELSFRS+VKAV+LRRDRVVVVLA ++YVYRFSDL LLD+INT N +GLVALC SN VLACPGV+RGHV VELYD R+ST+I AHES+LA+LALS DG +VATAS +GTLLRVFDT TG+ L ELRRG+DRA V SI F+ ++ F+AC SD+GTVHIFSL G
Sbjct: 1 CGTESGFRIYNVDPFKETFRRVFSGGGVGVVEMLFRCNLLALVGGGRSPRYPPNKVMIWDDHQNRCIGELSFRSDVKAVKLRRDRVVVVLATKVYVYRFSDLKLLDQINTQPNPRGLVALCPHPSNNVLACPGVNRGHVRVELYDARKSTIITAHESDLARLALSGDGALVATASDKGTLLRVFDTHTGAQLRELRRGVDRAAVYSIAFDAEAKFLACSSDKGTVHIFSLGDG 233
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 25
0 1 Expect = 1.21e-182 / Id = 100.00 Expect = 4.67e-162 / Id = 99.57 Expect = 2.32e-151 / Id = 81.15 Expect = 3.31e-140 / Id = 77.04 Expect = 6.76e-139 / Id = 76.65 Expect = 2.06e-131 / Id = 71.60 Expect = 4.93e-131 / Id = 71.48 Expect = 7.83e-127 / Id = 71.08 Expect = 7.76e-126 / Id = 71.60 Expect = 1.66e-123 / Id = 76.82 Sequence A0A6H5LNG1_9PHAE D7G3N5_ECTSI A0A835Z323_9STRA A0A4D9CZG2_9STRA W7U6T1_9STRA A0A067CH88_SAPPC A0A485KXM0_9STRA A0A7S3JWF9_9STRA A0A7S2CPD6_9STRA F0Y5R4_AURAN
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1
Stop 0
Cds size 789
Model size 1305
Exons 5
Ec32 ortholog Ec-00_006630.1
Ec32 ortholog description WD40/YVTN repeat-like-containing domain
Hectar predicted targeting category other localisation
BRITE ko00000,ko01001,ko03016
Best eggNOG OG NA|NA|NA
Best tax level Eukaryota
COG Functional cat. J
EggNOG OGs KOG2111@1,KOG2111@2759
EggNOG free text desc. phosphatidylinositol-3,5-bisphosphate binding
GOs GO:0000045,GO:0000407,GO:0000422,GO:0001101,GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006464,GO:0006497,GO:0006807,GO:0006914,GO:0006950,GO:0006952,GO:0006970,GO:0006979,GO:0006996,GO:0007005,GO:0007033,GO:0007275,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009058,GO:0009059,GO:0009414,GO:0009415,GO:0009605,GO:0009607,GO:0009620,GO:0009628,GO:0009651,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0009991,GO:0010035,GO:0010150,GO:0010506,GO:0010508,GO:0016020,GO:0016043,GO:0016236,GO:0019222,GO:0019538,GO:0019898,GO:0022411,GO:0022607,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031667,GO:0032266,GO:0032501,GO:0032502,GO:0033036,GO:0034045,GO:0034497,GO:0034613,GO:0034645,GO:0035091,GO:0036211,GO:0042157,GO:0042158,GO:0042221,GO:0042594,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0044804,GO:0048366,GO:0048367,GO:0048518,GO:0048522,GO:0048731,GO:0048827,GO:0048856,GO:0050789,GO:0050794,GO:0050832,GO:0050896,GO:0051179,GO:0051641,GO:0051704,GO:0051707,GO:0061726,GO:0061919,GO:0065007,GO:0070727,GO:0070925,GO:0071704,GO:0071840,GO:0080025,GO:0090693,GO:0098542,GO:0098805,GO:0099402,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1901981,GO:1902936,GO:1903008,GO:1905037
KEGG ko ko:K08876
Preferred name WDR45B
Seed eggNOG ortholog 2880.D7G3N5
Seed ortholog evalue 7.1e-128
Seed ortholog score 463.4
Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936527.7119815-UTR-E-siliculosus-1a_M_contig96:77682..78196 1622936527.7119815-UTR-E-siliculosus-1a_M_contig96:77682..78196 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig96 77683..78196 +
1696251117.6016526-UTR-E-siliculosus-1a_M_contig96:77682..78196 1696251117.6016526-UTR-E-siliculosus-1a_M_contig96:77682..78196 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig96 77683..78196 +
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig96.17554.1
>prot_E-siliculosus-1a_M_contig96.17554.1 ID=prot_E-siliculosus-1a_M_contig96.17554.1|Name=mRNA_E-siliculosus-1a_M_contig96.17554.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=263bp
MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVF SNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFR SEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCAD ASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVAT ASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRG TVHIFSLEPGTSN back to top mRNA from alignment at E-siliculosus-1a_M_contig96:77683..82847+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig96.17554.1 ID=mRNA_E-siliculosus-1a_M_contig96.17554.1|Name=mRNA_E-siliculosus-1a_M_contig96.17554.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5165bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:77683..82847+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)CTGCTGCCTGCTGCGCGCACACACACGTTGCTTCTCGTCCCTCTCACGCG
GTCTTCTCAGTTCCACCCGCCGCGCTACTACTAGCTTACACCCGGGCCGG
TTCGCCCTCTGCGTCCCGTCTCGTGTGCCGAGAGATTAATTAAATCCCTC
TCCTTCCTTTGTTACGAACTGGGCGACAATAGGCGACTGCAAGGACAGCA
AGAAGAACAAGAACGGACCTCTCCAGAGTACGAGCACGGCGAGGCAGCAA
AGCGAGGGAACTGCGTAGGGGCCAGAGTGGAGACAATTCGCAGACGTCTG
AGGTCTGATCCAGCTTGTGTCTGACTCCAGCGAAAGAGCCTGGACCCTAC
CGGCAGCAGCTAGAGCAGATTTGGCCGACGAATACCCTCTCTCACGAACA
TCAACTACAGACCGAGGGCGACCTGCGAACGGCAACACAGCAGGTTCACG
AGGCCCGGCGCGGAGCATCCGTGGCGTGCTCAATTAAGCACCCATCGAGG
GAGAGGCGCGCGAG ATGTCTAGCATGAGCCTCAGCAACAACCAGAAGAAC
GAACTCCTGTTCGTGGGCTTCAACCAAGACTACG GTGAGTTGGCCTACTT
TTATTTATTCACGTCTTCCGTGATTTTGCCCGCCTTCATGTACGATTCCG
CTCGAAATGGCAAGAGAGCGTGCCAGGTGTCACCAAATCGAGAAATAGTG
TGAGTGCGTGGTATCATACATCATACACCACGGTGTTGGATCGCATCGAA
CTGAACCGCCACTGCGAATGTGTCAGTTGGCGACTCCGAGGAGGCAGTAG
TCGTTTTTTTTTTGGCCTCGCAATTCGCAGTCCATTTTGGAGACCGTGAA
GTACAAATTACGCTCGCGGCCGGCCTGTGGAGCAGTTCGAGTTTTAAATA
CTGCTGTGGACACACGCTTCGTAGATGCACCTTCCGGCGAGTATATCCTG
CGACGAATGCCCGCGGGTATAAAGACAGGCAGGGCTTTGTTGAAATCCGT
ATGACGCGTCACGCTATTTTGTTTCGAACAGGCCTTGCAGCCTAATTGCG
TGTTTCGTCCAGCTGCTTCTTCCCATGGAACGCCGAACCTTGGGCGTCAT
TCCGCCCGTTCCCACAGCACGGACACCATCTTTCTGCGTACTAGTAAAAG
GAGCACCGTTATACCGCCGGCGTAACCAGCGTGGCGATTTAGCTCCTGGG
GATGCACCCGCGTGGTTTTGCTTGCAAACGAGATGCTAAATCAAACATTG
CGTTCGCCGCATTGTCCGCCCGTTTTTGGACTTGGCTGGACCGCGTACGC
AGGATTTTAAGAGTATCTAGAAAAATAATAGGGAGGGGGCACGCAGACGC
TATCCCTAACCCTCAAAGCACGGATTGAATACTTTATCCCATATGTTTGC
TTAATCAATTTGCTACCTGACTTGACTTGACAAACAAGATCATGCCAGCA
ACTTCATGCCTTCTTTGTTTAGAATCCCGAAACATCGAGTTGTACAGCGG
TCGCCCTTGCTTTAGTTTGTTTTCCTTCGAAAGCGGTGATGGCATGGTAC
GCGATGAAACCCAGCCGGTTTCGCTTACGTAGAGCAGGCGTGTTTGGTTT
TGTGTCGACATCGGGCCTGAGCGAAACACGGTTTTACAAAAGCAACAACA
CCGACTGACCACCACCACGTGGTACACGTTACTGCTATGAAACCCTTTCG
ATTTCGGTAGAGCAGGCATGTTTGGTTTTGTGTCGATATCGGGCCTGAAC
GAAACACGGCTTTGTAACAACGAGGACATGAACGACAACAACAACAACAA
CAACAACAAAATGGCACACGATACTGCTATGAAACCCTTTCGATTTCGGT
AGAGCAGGCGTGTTTGGTTTTGTGTCGATGTCGGGCCTGAGGAAAACACG
GCTTTCTACAAACAACAACGTTCCACCGCCACCACCACCACAAACGCCAA
CGAGAACGAACGATATCCTGCTGCTGTGTCAGGGTGTTTCGCCTGCGGCA
CGGACAACGGCTTCCGCATCTACAACGTCGACCCGTTCCGAGAGACTTTC
CGCAGGGTTTTCAGCAATGGAGGCATCGGCATCGTCGAGATGTTGTTCCG
CTGCAATTTGTTGGCCCTGGTCGGAGGGGGAAGAAACCCACGATACCCTC
CCAACAAG GTGGGATCCCGGGGGGGGGGGGAGTAACTCACGTAAATTTGT
GCATTCCTAGTTGTTAGACCTTTGACCTCGCTTCCCGGGACGGAGCGATG
TTTCGCCGGGCCAGGCGACGTTTCACAAGGTATGAACTATGAACCAGACG
CTGGTCATCGTCCTTTGGGGCTGGGGAGACAGGGAAAGCTCCGAAGGCTC
GGACGAAAGAAGCGTGAATGGGAGGGGAAGGGGAGACGGTGTGGTGCATG
GCGAAATATGTGTGTATATGTTGGTACTGCTTTGCCGATCGGAACCGAAT
CGTGTCGCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGGGC
GTTGAGGGCACGTACATGCAGCTGTGTTGGGACTTAGACGCAGCTGTGTT
GGGACTTTCCAAGCCTCCACACGCGCGCGACATCAGTCTGTGCGTTGTTT
ATGTGCCAAAGCACAACCGTGCTCGATGGTGGATATCCTCGTATGTATTT
CCCCCAACATGAGGGTACCGTTGCACGCAAGCAGTTTGCCCGCATCCGCC
ACGATGTCAATGAGACCGAAGTAAGCAGCAGGGGGCGGAGGCGGGGGGAG
GGGGTCCCAGCTCCCGCCTTTGCGCAAGGGAGAAGTTGAGTCATTTCTTC
TTCGATCTCTGTTTTTTTCCAACACCCTGTGGTGGCTCTTCAAACCCGTG
AGCGCTTTGACGGGATAACTATGCATCGACCATCGACGGTGTCTTCATCT
TTTGAGCACTCAACCCAATCGCACCGCCCCTCTCTCCTTCCCAATTTTTT
TTTTTGACAGGTGATGATCTGGGACGACCATCAGAGCCGCTGCATCGGCG
AGCTCAGCTTCCGCAGCGAGGTCAAGGCCGTCCGCCTTCGTCGCGACCGC
GTCGTCGTCGTACTCGCCCAGCGCATTTACGTCTACCGCTTCTCTGACCT
GCACCTGCTCGACCGCATCAACACCATCCGCAACGACCAGGGGCTGGTCG
CCCTCTGCGCGGACGCCTCCAACATGGTGCTCGCTTGCCCAGGGGTCAGC
CGCGGCCACGTCAACGTGGAGCTCTACGACCTGAGGCGGTCCACGCTGAT
CCCGGCCCACGAATCGGAGCTTGCCCAG GTGGGTTATGGGGTTTGGACCG
GCGTTTGTGTTTTTTTGGAGAGGGTGTGCTCATAATCTTGCATGCCGTAA
TCGTTAGACCATTGACCTCGCATCCCTGCAAAGCCGGGACAGAGCGACAT
GCCGGGTTTTCGCCGGCCCAGGCTACGTTTCACCAGCGTTTGCTGTACCA
AACCAGATATGCTAAGAGGGGAGGGGGGGCGGGGTACCCTTCATCATGCG
GTGCCGCAATCTTGGCTGAAATGATTTCGCGCTGGAGGGATAGGGGTCGG
GGGCGTCGTCGTCGTTTTCTTTGTGTCGTCTGCTCCGGTGTCTTGGTGGG
GCATATGTCGGCCATCGGACGAACTTGGAAGCGAGGGGGCTCCGGAGTGT
TGCGAGGGGGCGGTCTGGGATTTCGATGCTACTTTTGCTTGCTTGAGTTC
GAAAGGGTTTTGGCGGAGATGGTCGAGAATGTTCGCATATATTTTCCAGA
GAGTTTTTGTTTTGGCTGAAGCAGCAGCTTTTTGTTGTTGTCAGTTTGTT
GAAGGCCACACCATCCTCTTCGGGCCCAGGTTACTTGCCGCCCTCGATCT
CCCCGCTAGATCCCCGCAACTCTCGCTGCGTAGGCTTGATGTGTGGTACC
GTACACTAGACGCTTACACACGGCGAACATGCCGCCATTGGTACACGGTC
TTTCCTCCTGTGCCCACCATCCTCCGCGCCCCCTCCGCTACCCCGACGCC
GTGAAATCGAACTTGTGGTTTGAGTTTTTTTTGAAAGAGACCCACCCTAA
TGAAGATCTCACACATTTCCTCGTAGAAGATGTGCGTGCGCCTTTGTGTG
TGTTGTACTCTACATTGACTGTTTTGCTGTTTTTCCGCTCTCTCCTCTCG
CCCGCGGCGACGTAGGCGCGCGCTAGTCATTATGTTCCTCAGCGACGCAC
GTTAACCCCCCTCCCCCCCATACTGCTGTGCCCCCATTCATCGCGGCGCG
ATCGATATCTGGCTTGACGGCTTGTCATCCGGGGCTGATGAACCTGTCTC
TTGGGTTTTGGATTGTTTTTCTTCAGCTGGCTTTGAGCATGGATGGCAAG
ATGGTGGCTACGGCCTCAAGCCGCGGAACCCTCCTGAGGGTTTTCGACAC
AGACACTGGCTCTTTGTTGCAC GTGAGTTGTTAATTCTTCTTGTTCGGCC
GGTTTCTTCCGTGCGCAGACGGCGCCCTTATTTTGTGTGTGTGTGTGTGT
GGATGCTTGTTTTATTCTACTGTGACGGTGGCATGACTGTCAGTCGCAGC
CGGACGCGACACAGGAATCGCGTGTCGATATGTTTTTTCTTTGGGGATGT
GTCTGTCGCGATACTTGCTATTCCTGCGATAACCGCGGTATTTACCATCA
GTCGCAGCCGGACGCAATGTAGGAAGAATGTTGTATGTATCTTGCCGCCG
TCAGCTGACCTGATGAAATAGGATACGCCACGCTCTGCGGGACAACAGAT
AGAAACGACTCCCTCCTTGTACCTCCTACCCGGGGTCCTGCGATGGGAGG
GGCGCCGAACGAACCTATGCGTGTGCTTCTCTTTTAGCATCGACCGCGTG
TTGTGATGAGAGAGAAGCAGAGAAAATGTTGGCAGTGTGTTTGTGCAACT
GGTATGCCATAGCGGCAGTGCCGCGTGTCGTGTGTGCTGCGCGGTGCTGT
TTGTGTGCCTAGCCTTCGGCTCCTCCTACGCTTTCGAACTCTCCCCCCAT
TTTCCCGCCCATCGCACCGCTCCGCTCGCTCCAAAGGAGCTACGGAGAGG
CATGGACCGCGCAGAGGTGAGCTCCATCTGCTTCAACCAGCAGAGCACCT
TCGTGGCTTGCTGCAGCGATCGCGGAACGGTCCACATTTTTTCCCTCGAG
CCTGGCACGAGCAAC back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:77683..82847+
>mRNA_E-siliculosus-1a_M_contig96.17554.1 ID=mRNA_E-siliculosus-1a_M_contig96.17554.1|Name=mRNA_E-siliculosus-1a_M_contig96.17554.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1578bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:77683..82847+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male) ATGTCTAGCATGAGCCTCAGCAACAACCAGAAGAACGAACTCCTGTTCGT GGGCTTCAACCAAGACTACGATGTCTAGCATGAGCCTCAGCAACAACCAG AAGAACGAACTCCTGTTCGTGGGCTTCAACCAAGACTACGGGTGTTTCGC CTGCGGCACGGACAACGGCTTCCGCATCTACAACGTCGACCCGTTCCGAG AGACTTTCCGCAGGGTTTTCAGCAATGGAGGCATCGGCATCGTCGAGATG TTGTTCCGCTGCAATTTGTTGGCCCTGGTCGGAGGGGGAAGAAACCCACG ATACCCTCCCAACAAGGGTGTTTCGCCTGCGGCACGGACAACGGCTTCCG CATCTACAACGTCGACCCGTTCCGAGAGACTTTCCGCAGGGTTTTCAGCA ATGGAGGCATCGGCATCGTCGAGATGTTGTTCCGCTGCAATTTGTTGGCC CTGGTCGGAGGGGGAAGAAACCCACGATACCCTCCCAACAAGGTGATGAT CTGGGACGACCATCAGAGCCGCTGCATCGGCGAGCTCAGCTTCCGCAGCG AGGTCAAGGCCGTCCGCCTTCGTCGCGACCGCGTCGTCGTCGTACTCGCC CAGCGCATTTACGTCTACCGCTTCTCTGACCTGCACCTGCTCGACCGCAT CAACACCATCCGCAACGACCAGGGGCTGGTCGCCCTCTGCGCGGACGCCT CCAACATGGTGCTCGCTTGCCCAGGGGTCAGCCGCGGCCACGTCAACGTG GAGCTCTACGACCTGAGGCGGTCCACGCTGATCCCGGCCCACGAATCGGA GCTTGCCCAGGTGATGATCTGGGACGACCATCAGAGCCGCTGCATCGGCG AGCTCAGCTTCCGCAGCGAGGTCAAGGCCGTCCGCCTTCGTCGCGACCGC GTCGTCGTCGTACTCGCCCAGCGCATTTACGTCTACCGCTTCTCTGACCT GCACCTGCTCGACCGCATCAACACCATCCGCAACGACCAGGGGCTGGTCG CCCTCTGCGCGGACGCCTCCAACATGGTGCTCGCTTGCCCAGGGGTCAGC CGCGGCCACGTCAACGTGGAGCTCTACGACCTGAGGCGGTCCACGCTGAT CCCGGCCCACGAATCGGAGCTTGCCCAGCTGGCTTTGAGCATGGATGGCA AGATGGTGGCTACGGCCTCAAGCCGCGGAACCCTCCTGAGGGTTTTCGAC ACAGACACTGGCTCTTTGTTGCACCTGGCTTTGAGCATGGATGGCAAGAT GGTGGCTACGGCCTCAAGCCGCGGAACCCTCCTGAGGGTTTTCGACACAG ACACTGGCTCTTTGTTGCACGAGCTACGGAGAGGCATGGACCGCGCAGAG GTGAGCTCCATCTGCTTCAACCAGCAGAGCACCTTCGTGGCTTGCTGCAG CGATCGCGGAACGGTCCACATTTTTTCCCTCGAGCCTGGCACGAGCAACG AGCTACGGAGAGGCATGGACCGCGCAGAGGTGAGCTCCATCTGCTTCAAC CAGCAGAGCACCTTCGTGGCTTGCTGCAGCGATCGCGGAACGGTCCACAT TTTTTCCCTCGAGCCTGGCACGAGCAAC back to top