prot_E-siliculosus-1a_M_contig950.17544.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig950.17544.1
Unique Nameprot_E-siliculosus-1a_M_contig950.17544.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length110
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig950.17544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 4..109
e-value: 1.1E-9
score: 39.0
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 5..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig950contigE-siliculosus-1a_M_contig950:79..408 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig950.17544.1mRNA_E-siliculosus-1a_M_contig950.17544.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig950 79..408 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig950.17544.1 ID=prot_E-siliculosus-1a_M_contig950.17544.1|Name=mRNA_E-siliculosus-1a_M_contig950.17544.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=110bp
VFPCPVAGDIPRGLGALSDLREVNLGGNKLEGTTWTSVFLGDCAKLVFRL
MNPVYALASIDLRRSMMLKNESRCNFLRCIFCTGPIPKELGKLVALKMLS
LWRNQLAGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf