Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Start | 0 |
Stop | 1 |
Cds size | 330 |
Model size | 330 |
Exons | 1 |
Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622936525.4257867-CDS-E-siliculosus-1a_M_contig950:78..408 | 1622936525.4257867-CDS-E-siliculosus-1a_M_contig950:78..408 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig950 79..408 - |
1696251116.8015625-CDS-E-siliculosus-1a_M_contig950:78..408 | 1696251116.8015625-CDS-E-siliculosus-1a_M_contig950:78..408 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig950 79..408 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig950.17544.1 >prot_E-siliculosus-1a_M_contig950.17544.1 ID=prot_E-siliculosus-1a_M_contig950.17544.1|Name=mRNA_E-siliculosus-1a_M_contig950.17544.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=110bp
VFPCPVAGDIPRGLGALSDLREVNLGGNKLEGTTWTSVFLGDCAKLVFRL MNPVYALASIDLRRSMMLKNESRCNFLRCIFCTGPIPKELGKLVALKMLS LWRNQLAGE* back to topmRNA from alignment at E-siliculosus-1a_M_contig950:79..408- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig950.17544.1 ID=mRNA_E-siliculosus-1a_M_contig950.17544.1|Name=mRNA_E-siliculosus-1a_M_contig950.17544.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=330bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig950:79..408- (Ectocarpus siliculosus Ec864m_EcPH12_78m male) GTCTTCCCCTGTCCGGTCGCAGGCGACATCCCGCGGGGGCTAGGAGCCCT
CAGCGACCTGCGGGAGGTGAATCTTGGCGGGAACAAGCTTGAAGGTACAA
CTTGGACTTCTGTATTTTTGGGCGATTGTGCAAAGCTGGTTTTCAGACTG
ATGAATCCCGTGTATGCGTTGGCGTCCATAGACCTACGGAGATCGATGAT
GTTGAAAAATGAGTCCCGTTGTAATTTCCTCCGCTGTATCTTTTGTACAG
GACCCATTCCCAAAGAGTTGGGAAAGCTTGTGGCACTGAAGATGCTCTCC
CTTTGGAGAAACCAGCTAGCTGGTGAGTAA back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig950:79..408- >mRNA_E-siliculosus-1a_M_contig950.17544.1 ID=mRNA_E-siliculosus-1a_M_contig950.17544.1|Name=mRNA_E-siliculosus-1a_M_contig950.17544.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=660bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig950:79..408- (Ectocarpus siliculosus Ec864m_EcPH12_78m male) GTCTTCCCCTGTCCGGTCGCAGGCGACATCCCGCGGGGGCTAGGAGCCCT CAGCGACCTGCGGGAGGTGAATCTTGGCGGGAACAAGCTTGAAGGTACAA CTTGGACTTCTGTATTTTTGGGCGATTGTGCAAAGCTGGTTTTCAGACTG ATGAATCCCGTGTATGCGTTGGCGTCCATAGACCTACGGAGATCGATGAT GTTGAAAAATGAGTCCCGTTGTAATTTCCTCCGCTGTATCTTTTGTACAG GACCCATTCCCAAAGAGTTGGGAAAGCTTGTGGCACTGAAGATGCTCTCC CTTTGGAGAAACCAGCTAGCTGGTGAGTAAGTCTTCCCCTGTCCGGTCGC AGGCGACATCCCGCGGGGGCTAGGAGCCCTCAGCGACCTGCGGGAGGTGA ATCTTGGCGGGAACAAGCTTGAAGGTACAACTTGGACTTCTGTATTTTTG GGCGATTGTGCAAAGCTGGTTTTCAGACTGATGAATCCCGTGTATGCGTT GGCGTCCATAGACCTACGGAGATCGATGATGTTGAAAAATGAGTCCCGTT GTAATTTCCTCCGCTGTATCTTTTGTACAGGACCCATTCCCAAAGAGTTG GGAAAGCTTGTGGCACTGAAGATGCTCTCCCTTTGGAGAAACCAGCTAGC TGGTGAGTAA back to top
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