prot_E-siliculosus-1a_M_contig95.17518.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17518.1
Unique Nameprot_E-siliculosus-1a_M_contig95.17518.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length579
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17518.1 vs. uniprot
Match: D7G1W1_ECTSI (Carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1W1_ECTSI)

HSP 1 Score: 1014 bits (2622), Expect = 0.000e+0
Identity = 539/578 (93.25%), Postives = 546/578 (94.46%), Query Frame = 0 
Query:    1 MVAADMGHLKDTVEKLDRIVRETMGQHGKDLAAVLVQLGLERPSRSNLVAGSESRPIPAEGLANNNAGGAKPAWPSPLKQAPQDRLQLAGGSRQGQGDASVLGAGGGVDHVAVRGTAEDGSLAGGGPTTGKALGRDAQANGKGATGGLTKEGARGAAEGVAVWNAYQRGKWVNGQWVPKVLQDDTSPDLSQLATTGKKQRRVLLLSEKRSGGQAVGGVLNADTRVFYVADPCRMGGGPEALDAGACSLAVTRLLACQPTTNDIRNLFSFSYIVERSRVLSESEGLRWKAGGTPDENDEETRAAVIRQCRLSSVVVVKETRLAEVAPRLSTPELGLEFLHIVRDPRAAIHGMAEQWEKSDNKMERSMARDCSDVASRLCASTENKLKFLTLLGKQRFRVLKHEMVTEAIRLTSMRGSSENSPGTAVTGNGSKSTMGGFDWATRWAVEMPTFRRQQVQLVCQPLLVALGYDDPEDPEEQQDAXXXXXXXXXXXXSSEELGTAFDGTSSDRGAGGTDFGSSMTDGVNGVGHGGGGAEKLRVSSALPSSSLSAATAAKNPESVAAAADTILPGHDAIARHYG 578
            MVAADMGHLKDTVEKLD IVRETMGQHGKDLAAVLVQLGLERPSRSNLVAGSESRP+PAEGL NN A GA PAWPSPL+QAPQD+LQLAGGSRQGQGDASVLGAGGGVDHVAVRGTAEDGSLAGGGPTTGKALGRD Q NGKGA GGLT+EGARGAAEGVAVWNAYQRGKWVNGQWVPKVLQDDTSPDLSQLATTGKKQRRVLLLSEKRSGG AVGGVLNADTRVFYVADPCRMGGGPEALDAGACSLAVTRLLACQPTTNDIRNLFSFSYIVERSRVLSESEGLRW+A GTPDENDEETRAAVIRQCRLSSVVVVKETRLAEVAPRLSTPEL LEFLHIVRDPRAAIHGMAE WEKSDNKMERSMARDCSDVASRLC S ENKLKFLTLLGKQRFRVLKHEMVTEAIR TSMR S+ENSPGTAV GNGSKSTMGGFDWATRWAVEMPTFRRQQVQL C PLLVALGYDDPEDPEEQQDA  XXXX      SSEEL TAFDGTSSDRGAGGT FGSSMTDGVN VGHGGGGAEKLR SSALPSSSLSAATAA+NPESVAAAADTILPG DAIARHYG
Sbjct:    1 MVAADMGHLKDTVEKLDHIVRETMGQHGKDLAAVLVQLGLERPSRSNLVAGSESRPMPAEGLTNNKARGATPAWPSPLQQAPQDQLQLAGGSRQGQGDASVLGAGGGVDHVAVRGTAEDGSLAGGGPTTGKALGRDTQGNGKGAAGGLTEEGARGAAEGVAVWNAYQRGKWVNGQWVPKVLQDDTSPDLSQLATTGKKQRRVLLLSEKRSGGHAVGGVLNADTRVFYVADPCRMGGGPEALDAGACSLAVTRLLACQPTTNDIRNLFSFSYIVERSRVLSESEGLRWQAEGTPDENDEETRAAVIRQCRLSSVVVVKETRLAEVAPRLSTPELDLEFLHIVRDPRAAIHGMAELWEKSDNKMERSMARDCSDVASRLCTSAENKLKFLTLLGKQRFRVLKHEMVTEAIRSTSMRSSAENSPGTAVAGNGSKSTMGGFDWATRWAVEMPTFRRQQVQLACHPLLVALGYDDPEDPEEQQDAGEXXXXESQGESSSEELSTAFDGTSSDRGAGGTGFGSSMTDGVNRVGHGGGGAEKLRASSALPSSSLSAATAARNPESVAAAADTILPGPDAIARHYG 578
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17518.1 vs. uniprot
Match: A0A835ZGF5_9STRA (HEAT repeat-containing protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGF5_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 7.940e-9
Identity = 48/184 (26.09%), Postives = 83/184 (45.11%), Query Frame = 0 
Query:  198 KQRRVLLLSEKRSGGQAVGGVLNADTRVFYVADPCRMGG-GPEALDAGACSLAVTRLLACQPTTNDIRNLFSFSYIVERSRVLSESEGLRWKAGGTPDENDEETRAAVIRQCRLSSVVVVKETRLAEVAPRLSTPELGLEFLHIVRDPRAAIHGMAEQWEKSDNKMERSMARDCSDVASRLCAS 380
            +Q+R+L++SE RSG    G + N++ ++FY+ +PC+ GG G  AL   AC   + RLL C+PT  D+ N+F                             D ++   V+++ R   V V       ++ PR +      + +H+VRDPR A+      W   D  +E      C    +++ ++
Sbjct:  246 EQKRLLIVSEPRSGSTQFGELFNSNEQLFYLFEPCKGGGDGGTALYDEACGYLLQRLLECEPTVKDVDNMF----------------------------RDRQSAGVVVKEIRTVGVHV-------DMLPRAT------KVMHLVRDPRDAMLSALALWRGQDGGLEFQSGEFCRRTMAKITST 388
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17518.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1W1_ECTSI0.000e+093.25Carbohydrate (N-acetylglucosamine 6-O) sulfotransf... [more]
A0A835ZGF5_9STRA7.940e-926.09HEAT repeat-containing protein 1 n=1 Tax=Tribonema... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10704CARBOHYDRATE SULFOTRANSFERASEcoord: 190..387
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 171..469

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:474216..481651 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17518.1mRNA_E-siliculosus-1a_M_contig95.17518.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig95 474216..481651 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig95.17518.1 ID=prot_E-siliculosus-1a_M_contig95.17518.1|Name=mRNA_E-siliculosus-1a_M_contig95.17518.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=579bp
MVAADMGHLKDTVEKLDRIVRETMGQHGKDLAAVLVQLGLERPSRSNLVA
GSESRPIPAEGLANNNAGGAKPAWPSPLKQAPQDRLQLAGGSRQGQGDAS
VLGAGGGVDHVAVRGTAEDGSLAGGGPTTGKALGRDAQANGKGATGGLTK
EGARGAAEGVAVWNAYQRGKWVNGQWVPKVLQDDTSPDLSQLATTGKKQR
RVLLLSEKRSGGQAVGGVLNADTRVFYVADPCRMGGGPEALDAGACSLAV
TRLLACQPTTNDIRNLFSFSYIVERSRVLSESEGLRWKAGGTPDENDEET
RAAVIRQCRLSSVVVVKETRLAEVAPRLSTPELGLEFLHIVRDPRAAIHG
MAEQWEKSDNKMERSMARDCSDVASRLCASTENKLKFLTLLGKQRFRVLK
HEMVTEAIRLTSMRGSSENSPGTAVTGNGSKSTMGGFDWATRWAVEMPTF
RRQQVQLVCQPLLVALGYDDPEDPEEQQDAREDGQEESQGESSSEELGTA
FDGTSSDRGAGGTDFGSSMTDGVNGVGHGGGGAEKLRVSSALPSSSLSAA
TAAKNPESVAAAADTILPGHDAIARHYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase