Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match:
D7G1V9_ECTSI (Dynein light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V9_ECTSI)
HSP 1 Score: 220 bits (560), Expect = 6.650e-73
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1
Query: 1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 306
MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG
Sbjct: 1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 102
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match:
A0A836CJA1_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA1_9STRA)
HSP 1 Score: 162 bits (410), Expect = 5.080e-50
Identity = 72/102 (70.59%), Postives = 84/102 (82.35%), Query Frame = 1
Query: 1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 306
M M DW MWGAKVK+P DM DD+L+DAI+T R+ LD C DFEAEGLA+AEKIK+H D +WDP WHV+IGRNFGSFVTHET F+YFY+ DKA+MMYKAG
Sbjct: 1 MPSMGDDWRMMWGAKVKLPLDMPDDILKDAIDTSREVLDKCHDFEAEGLASAEKIKRHLDEQWDPHWHVVIGRNFGSFVTHETRMFLYFYIGDKAVMMYKAG 102
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match:
A0A7S2W886_9STRA (Dynein light chain n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W886_9STRA)
HSP 1 Score: 146 bits (368), Expect = 1.280e-43
Identity = 67/102 (65.69%), Postives = 78/102 (76.47%), Query Frame = 1
Query: 1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 306
MGE VP+W MWGAKVK P D+ DDML+DAI T + + DFEAEG+ AEKIK+ FD RW P WHVIIG+NFGSFVTHET F+YFY DKA+M+YKAG
Sbjct: 1 MGEEVPEWQMMWGAKVKTPVDVPDDMLKDAILTSQRLIGEATDFEAEGVDVAEKIKREFDERWTPYWHVIIGKNFGSFVTHETKRFLYFYFDDKAVMIYKAG 102
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match:
A0A7S1TPD3_9STRA (Dynein light chain n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPD3_9STRA)
HSP 1 Score: 145 bits (365), Expect = 3.790e-43
Identity = 63/98 (64.29%), Postives = 77/98 (78.57%), Query Frame = 1
Query: 13 VPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 306
+ +W+ MWGA+VK+P DM DDML+DA+ET R + DFE +GL AAE IK FD +W P+WHV++GR FGSFVTHET CFVYFYL DKA+MMYKAG
Sbjct: 6 IQEWSTMWGARVKVPCDMGDDMLKDAVETTRSVFEEFPDFENDGLKAAEAIKLAFDEKWTPNWHVVVGRGFGSFVTHETKCFVYFYLDDKAVMMYKAG 103
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match:
A0A7S1CI82_9STRA (Dynein light chain n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CI82_9STRA)
HSP 1 Score: 132 bits (333), Expect = 2.850e-38
Identity = 60/103 (58.25%), Postives = 76/103 (73.79%), Query Frame = 1
Query: 1 MGEMVP-DWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 306
MGE P +W MWGAKVK P+D+ DDML DAI R AL+ D+E+EG A +K+KK FD +W P WH ++G NFGSFVTHE FVYFY+ADKA++++KAG
Sbjct: 1 MGESAPVEWKHMWGAKVKWPSDLPDDMLEDAITVTRAALEGIEDWESEGDAVVDKLKKTFDEKWGPHWHAVVGTNFGSFVTHEARRFVYFYVADKAVLLFKAG 103
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match:
H3GHN7_PHYRM (Dynein light chain n=21 Tax=Oomycota TaxID=4762 RepID=H3GHN7_PHYRM)
HSP 1 Score: 119 bits (299), Expect = 4.280e-33
Identity = 61/104 (58.65%), Postives = 70/104 (67.31%), Query Frame = 1
Query: 1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIE--TCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 306
MGE P W MWGAKVKMP DM DD+L DAI+ T R ++E GLA E+IK H D WDP W V IGRNFGSFVTH T FV+FY +KA+M+YKAG
Sbjct: 1 MGE-APSWQHMWGAKVKMPCDMEDDVLEDAIKHVTSRLTKYDTEEWEKNGLAVCEEIKAHLDEAWDPHWVVCIGRNFGSFVTHVTRNFVFFYYNEKAVMIYKAG 103
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match:
A0A5D6XID8_9STRA (Dynein light chain n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XID8_9STRA)
HSP 1 Score: 119 bits (299), Expect = 4.280e-33
Identity = 60/104 (57.69%), Postives = 72/104 (69.23%), Query Frame = 1
Query: 1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIE--TCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 306
MGE P+W MWGAKVKMP DM DD+L DAI+ T R A ++E +GL E+IK H D W+P W V IGRNFGS+VTH T FVYFY +KA+M+YKAG
Sbjct: 1 MGE-APNWQHMWGAKVKMPCDMEDDVLEDAIKHVTSRLAKYDTEEWEKQGLTVCEEIKAHMDELWEPHWVVCIGRNFGSYVTHVTRNFVYFYFNEKAVMVYKAG 103
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match:
A0A7S2WLS4_9STRA (Dynein light chain n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WLS4_9STRA)
HSP 1 Score: 118 bits (295), Expect = 1.790e-32
Identity = 55/102 (53.92%), Postives = 69/102 (67.65%), Query Frame = 1
Query: 1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 306
MGE V +W +WGAKVK P +M DD+L+DAI T + L C +FE+ G A + IK H D +W P W IGRNFGS V+HET FV+FY DKA+M+YK G
Sbjct: 3 MGEEVREWQTIWGAKVKTPVEMPDDILKDAITTVTNELAACENFESNGNLAVQNIKDHMDHKWSPHWCCFIGRNFGSKVSHETRRFVFFYHNDKAVMLYKIG 104
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match:
K3WRF9_GLOUD (Dynein light chain n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRF9_GLOUD)
HSP 1 Score: 116 bits (291), Expect = 7.070e-32
Identity = 59/104 (56.73%), Postives = 71/104 (68.27%), Query Frame = 1
Query: 1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIE--TCRDALDHCADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 306
MGE P W MWGAKVKMP DM DD+L D I+ T R A ++E +GLA E++K H D W+P W V IGRNFGS+VTH T FV+FY +KAIM+YKAG
Sbjct: 1 MGE-APSWQYMWGAKVKMPCDMEDDVLEDVIKHVTTRLAKFDTEEWEKKGLAVCEELKAHMDTLWEPHWVVCIGRNFGSYVTHVTRNFVFFYYNEKAIMVYKAG 103
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Match:
A0A1V9ZER7_9STRA (Dynein light chain n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZER7_9STRA)
HSP 1 Score: 115 bits (288), Expect = 2.020e-31
Identity = 56/104 (53.85%), Postives = 70/104 (67.31%), Query Frame = 1
Query: 1 MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDH--CADFEAEGLAAAEKIKKHFDARWDPSWHVIIGRNFGSFVTHETTCFVYFYLADKAIMMYKAG 306
MGE P W MWGA+VK P DM DD+L D I+ L+ ++E +GLA E+I+ H D WDP+W V IGRNFGS+VTH T FVYFY +KAI++YKAG
Sbjct: 1 MGE-APSWQNMWGARVKTPCDMEDDVLEDVIKYVTQRLEQFDTEEWEKQGLAVCEEIRDHLDKAWDPAWVVCIGRNFGSYVTHVTRNFVYFYYNEKAILIYKAG 103
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17516.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 25
0 1 Expect = 6.65e-73 / Id = 100.00 Expect = 5.08e-50 / Id = 70.59 Expect = 1.28e-43 / Id = 65.69 Expect = 3.79e-43 / Id = 64.29 Expect = 2.85e-38 / Id = 58.25 Expect = 4.28e-33 / Id = 58.65 Expect = 4.28e-33 / Id = 57.69 Expect = 1.79e-32 / Id = 53.92 Expect = 7.07e-32 / Id = 56.73 Expect = 2.02e-31 / Id = 53.85 Sequence D7G1V9_ECTSI A0A836CJA1_9STRA A0A7S2W886_9STRA A0A7S1TPD3_9STRA A0A7S1CI82_9STRA H3GHN7_PHYRM A0A5D6XID8_9STRA A0A7S2WLS4_9STRA K3WRF9_GLOUD A0A1V9ZER7_9STRA Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17516.1
>prot_E-siliculosus-1a_M_contig95.17516.1 ID=prot_E-siliculosus-1a_M_contig95.17516.1|Name=mRNA_E-siliculosus-1a_M_contig95.17516.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=103bp
MGEMVPDWAQMWGAKVKMPTDMRDDMLRDAIETCRDALDHCADFEAEGLA back to top mRNA from alignment at E-siliculosus-1a_M_contig95:466439..468289+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig95.17516.1 ID=mRNA_E-siliculosus-1a_M_contig95.17516.1|Name=mRNA_E-siliculosus-1a_M_contig95.17516.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=1851bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:466439..468289+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)ATGGGAGAAATGGTGCCTGACTGGGCGCAAATGTGGGGGGCTAAGGTCAA
GATGCCAACAGACATGCGCGATGACATGCTGAGAGATGCCATCGAGACAT
GCAGGGATGCCTTGGATCACTGTGCGGATTTCGAAGCAGAAG GTACTTCA
AAATACTGCACACCAGACAGGCCGCTTATCGATTGGGTTGCATAGCAATC
AACGCTACAGAAAACGGACGTAGACGTTGATATTGCCAGTAGCGTGAGGT
CATGCGTCATACAACTTCACGATATAGCAAACGTAAAAGGTTCTTCTGGA
CTGAAATAAGCGTTTGGTTGACACTACATGTTATCGCGTGGGCACGAAAT
TGCTTCCAGGAAGAGCAGAAGTAATCCTCTGCCTAAGCTTTTAGACTATC
GATGATGAGAGAGAGAGTCTGAAGACCGCCAAAGTACTCGTTATCCCTTT
TAATTTTCTGTTTTTATGTGAGAAGAGAATTGTTCCTGAAGCGCTTGCGA
GAGACTCCAACGGTATTTTCCCTTTCCAAACAATTGAGTTGCACGCTTTC
AAAACAGGACTAGCCGCAGCAGAGAAGATCAAAAAGCATTTCGACGCGCG
GTGGGACCCCAGCTGGCATGTCATAATCGGTCGAAATTTCGGCTCTTTCG
TGACGCACGAAACAAC GTGAGTCTTCTCTGTTGCAGTCTGTCTAGATACG
GAACGGAAACGCCTACACTGTAGCTAGCAACAGGTGTACAATCAATGACG
CGTGCAAGCATCTATTGAGGGGGGCAAGACTTGTACTGCGTAGATCTTTC
TATGTAGGGAACGCTCGTTGGTTCGCTGCGGAGAGTATCGCCATCATGGA
GGCAGCGTGATTGACGCCATTGACGCCATTGACCAACTACCAACTTTACG
GCGATGACCGCATCCTACCTCACGACAACCTGGATCCACTTGGTATGGCT
CCAATGCTGAGGATAGGTTTGTTTCGCCAAAGGTGTTATCGTCTTGGCTC
CCGTCACCGCCTCCACTGTTTTTCACGTGAAAGGGGCTTCATGTCATACA
ATCCGTAGTTCGAACAGAAGCGTACGGGAGACATGATTTTAGACGCGTTG
CTTTTACTCTTCAACGCAAAAAAGACTACAGTAGCAGCATATTTCCGGAC
ACGTTACCACCTCCCGTGCATCTCCCTCCCTCCTTCTCCCTCGGGAGGAC
GAAAACTAGGATGGCCTTTTGATTGCGTTGTGCCCTGATCGTGTATGGTT
CTTCCCGTGGTATATCTCACTCGGGTCTTTCGGTTTGAGGATCTGGCGGG
TGGTGCATGCGACACAGAGCCCTTGCTAGACACTGAGCTCCACTGGGCGA
CGACACAACATCGTATACCTACTCAACAGATGTTCGAACATGTATTTTAG
GCCCTGAAGCGGCGTGACATCTTCATCTTTCCACAGGGGCAGAGAAACTG
GTATCCTGGTACCGTACCGAAAGGATTGGTTTGGTTTGGTTGCCATCCAG
GCTACTGGGACGACGTCCCTGAAACATATTCAGGACGAAGAGTAAATAGC
TGGCAGTTCTGGGGTCTTCAGCTATTGCCTTTCTTCCCGCCATTGACCTG
GATTGTTTTTTCTCGGGGCTTGCTTGTCCTGAACGAGGAGAGCTTAACCA
CTATGTTCGCCTAATCAAAACGGTAATTTGATGGTTGTGCTAAGGCACGA
CCTCCCCCCGCGCGCGCGCCACTCATTCCGTTTTCCTCTTGACTCCCGCG
CTTGCTATGAATCTGGCATCTCCATCTCTCCCTCGCACGAAAGGTGTTTC
GTTTACTTCTACTTGGCAGACAAAGCGATCATGATGTACAAAGCCGGCTG
A back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:466439..468289+
>mRNA_E-siliculosus-1a_M_contig95.17516.1 ID=mRNA_E-siliculosus-1a_M_contig95.17516.1|Name=mRNA_E-siliculosus-1a_M_contig95.17516.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=618bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:466439..468289+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male) back to top