prot_E-siliculosus-1a_M_contig95.17510.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17510.1
Unique Nameprot_E-siliculosus-1a_M_contig95.17510.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length127
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17510.1 vs. uniprot
Match: D7G1V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V2_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 4.410e-71
Identity = 113/123 (91.87%), Postives = 117/123 (95.12%), Query Frame = 0
Query:    3 SDTVYDVMGFLGGAVMAAALVPQVYRVTVRKKAADISHVYQAVFVTGMVMFLVFYGYYELWELFFPTLASMMLQIYLAVLKLRLERCPRRHTAATPSTVASETPGEGATLDNGSSESSPLLKS 125
            SDTVYDVMGFLGG VMAA+LVPQVYRVTVRKKAADISH YQ VFVTG+VMFLVFYGYYELWELFFP LASMMLQIYLAVLK+RLERCPRRHTAA PSTVASETPGEGATLDNGSSE +PLLKS
Sbjct:    2 SDTVYDVMGFLGGCVMAASLVPQVYRVTVRKKAADISHTYQVVFVTGIVMFLVFYGYYELWELFFPALASMMLQIYLAVLKIRLERCPRRHTAAAPSTVASETPGEGATLDNGSSERTPLLKS 124          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17510.1 vs. uniprot
Match: A0A6H5KU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU65_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 3.670e-31
Identity = 65/127 (51.18%), Postives = 85/127 (66.93%), Query Frame = 0
Query:    1 MTSDTVYDVMGFLGGAVMAAALVPQVYRVTVRKKAADISHVYQAVFVTGMVMFLVFYGYYELWELFFPTLASMMLQIYLAVLKLRLERCPRRHTAATP--STVASETPGEGATLDNGSSESSPLLKS 125
            MTSD  Y++MG  GG ++A A  PQ+ RV  RK++ADIS+ +  VF+ GMVMFLV+YGYYELWELFFP+L SM   I L   K+R+E  P R  AA    S    +TPG+G  + N SS++ PL+ S
Sbjct:    1 MTSDVPYNLMGVCGGLIVACAYAPQLARVIRRKQSADISYTHLMVFMGGMVMFLVYYGYYELWELFFPSLISMSFVILLLAAKIRMEEFPLRPRAAAAGASVAVGDTPGDGERMTNTSSDAQPLMSS 127          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17510.1 vs. uniprot
Match: D7G1V3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V3_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 5.200e-31
Identity = 66/127 (51.97%), Postives = 85/127 (66.93%), Query Frame = 0
Query:    1 MTSDTVYDVMGFLGGAVMAAALVPQVYRVTVRKKAADISHVYQAVFVTGMVMFLVFYGYYELWELFFPTLASMMLQIYLAVLKLRLERCPRRHTAATP--STVASETPGEGATLDNGSSESSPLLKS 125
            M SD  Y++MG  GG ++A A VPQ+ RV  RK++ADIS+ +  VFV G+VMFL +YGYYELWE+FFP L SM   I L  LK+RLE  P R  AA P  S V  +T G+G  + N SS++ PL+ S
Sbjct:    1 MASDVPYNLMGASGGLIVAFAFVPQLARVIRRKQSADISYAHLMVFVGGLVMFLAYYGYYELWEVFFPALLSMSFAILLLALKIRLEEFPLRPRAAVPGASVVVGDTSGDGERMANTSSDAQPLMSS 127          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17510.1 vs. uniprot
Match: D8LCW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW9_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 5.180e-12
Identity = 32/83 (38.55%), Postives = 55/83 (66.27%), Query Frame = 0
Query:    7 YDVMGFLGGAVMAAALVPQVYRVTVRKKAADISHVYQAVFVTGMVMFLVFYGYYELWELFFPTLASMMLQIYLAVLKLRLERC 89
            ++++GF+GG V+A AL+PQ+Y    RK  ADIS+++QAV+  G++  +++Y ++ LW +F+P        +YL  LK+  E C
Sbjct:    8 FNIIGFVGGVVLATALLPQIYLAHSRKSTADISYLWQAVYTVGLLTLMIYYFHFRLWAVFYPMAFEFSSLMYLTGLKIYYEVC 90          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17510.1 vs. uniprot
Match: A0A1E7FTB5_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FTB5_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 2.420e-9
Identity = 29/81 (35.80%), Postives = 50/81 (61.73%), Query Frame = 0
Query:    8 DVMGFLGGAVMAAALVPQVYRVTVRKKAADISHVYQAVFVTGMVMFLVFYGYYELWELFFPTLASMMLQIYLAVLKLRLER 88
            D++GF+GG  ++ +L+PQVY+    K A DIS+ YQA+++ G  + L++     LW ++ P    + L I L V+K+  +R
Sbjct:    7 DIIGFVGGTTISLSLIPQVYKTFHSKSAGDISYYYQAIYIVGCTLTLIYAAALRLWPVYIPITLELTLIISLTVMKVIFDR 87          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17510.1 vs. uniprot
Match: A0A2D4BQS8_PYTIN (Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQS8_PYTIN)

HSP 1 Score: 55.1 bits (131), Expect = 3.340e-6
Identity = 31/64 (48.44%), Postives = 46/64 (71.88%), Query Frame = 0
Query:    6 VYDVMGFLGGAVMAAALVPQVYRVTVRKKAADISHVYQAVFVTGMVMFLVFYGYYE-LWELFFP 68
            VY+V+G LG +V+AA+LVPQ+Y++   K A DIS+ Y  +F+TG V+ +V YG  E LW ++ P
Sbjct: 1451 VYNVLGLLGSSVIAASLVPQIYKIWRTKSAKDISYGYSCLFITGSVL-IVTYGLGEGLWPVWIP 1513          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17510.1 vs. uniprot
Match: A0A2D4BNB1_PYTIN (C3H1-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNB1_PYTIN)

HSP 1 Score: 53.9 bits (128), Expect = 7.930e-6
Identity = 31/64 (48.44%), Postives = 45/64 (70.31%), Query Frame = 0
Query:    6 VYDVMGFLGGAVMAAALVPQVYRVTVRKKAADISHVYQAVFVTGMVMFLVFYGYYE-LWELFFP 68
            VY+V+G LG +V+AA+LVPQ+Y++   K A DIS  Y  +F+TG V+ +V YG  E LW ++ P
Sbjct:  498 VYNVLGLLGSSVIAASLVPQIYKIWRTKSAKDISXGYSCLFITGSVL-IVTYGLGEGLWPVWIP 560          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17510.1 vs. uniprot
Match: A0A662XQM1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQM1_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 7.240e-5
Identity = 32/93 (34.41%), Postives = 53/93 (56.99%), Query Frame = 0
Query:    2 TSDTVYDVMGFLGGAVMAAALVPQVYRVTVRKKAADISHVYQAVFVTGMVMFLVFYGYYE-LWELFFPTLASMMLQIYLAVLKLRLERCPRRH 93
            T   VY ++G LG  ++AA+LVPQ+++V   K A DIS  +Q  ++ G+ M +V YG+   LW ++ P    +   + L  +KL  +   R+H
Sbjct:    5 TMGEVYQILGLLGSLLLAASLVPQMWKVYRTKSAKDISLTFQLTYLLGLSM-IVAYGFGRWLWPIYIPATIELCAALTLFSMKLYYDWQNRKH 96          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G1V2_ECTSI4.410e-7191.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KU65_9PHAE3.670e-3151.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1V3_ECTSI5.200e-3151.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCW9_ECTSI5.180e-1238.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1E7FTB5_9STRA2.420e-935.80Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A2D4BQS8_PYTIN3.340e-648.44Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
A0A2D4BNB1_PYTIN7.930e-648.44C3H1-type domain-containing protein n=1 Tax=Pythiu... [more]
A0A662XQM1_9STRA7.240e-534.41Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1280.290coord: 3..93
e-value: 1.2E-10
score: 43.4
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 83..126
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 60..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availableTMHMMTMhelixcoord: 38..60
NoneNo IPR availableTMHMMTMhelixcoord: 10..31
NoneNo IPR availableTMHMMTMhelixcoord: 65..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:415777..419178 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17510.1mRNA_E-siliculosus-1a_M_contig95.17510.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig95 415574..419936 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig95.17510.1 ID=prot_E-siliculosus-1a_M_contig95.17510.1|Name=mRNA_E-siliculosus-1a_M_contig95.17510.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=127bp
MTSDTVYDVMGFLGGAVMAAALVPQVYRVTVRKKAADISHVYQAVFVTGM
VMFLVFYGYYELWELFFPTLASMMLQIYLAVLKLRLERCPRRHTAATPST
VASETPGEGATLDNGSSESSPLLKSA*
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