prot_E-siliculosus-1a_M_contig95.17504.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17504.1
Unique Nameprot_E-siliculosus-1a_M_contig95.17504.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length394
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17504.1 vs. uniprot
Match: D7G1U7_ECTSI (CUE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U7_ECTSI)

HSP 1 Score: 486 bits (1252), Expect = 1.200e-169
Identity = 326/340 (95.88%), Postives = 328/340 (96.47%), Query Frame = 0 
Query:    1 MAEISTEDAVEQLHQMFGDYDKTALATVLEAHGGHVERTVEHLLSNPQAAXXXXXXXXXXXXXXXXXXXSGTDHDAALALQLSREWSDEPTNMPPPPVRPQGIPTPYGVGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDRRGRRVALPEQFLRTPGWTGGGAGEVSSDPQVAADAKLAMMLQNEAFQRELQSHPDLAYLGRGSRSGDSRGNAFGMGGEGPSIKEQMTSMGNDIRRKVDELAVRWKMKDPGRADQTTEYSSVPLMSSVDDDADDQAEVVHFSQNNATRRSSSGGSAAGVGVFRADSAGEEQLGE 340
            MAEISTEDAVEQLHQMFGDYDKTALA VLEAHGGHVERTVEHLLSNPQAA  XXXXXXXXXXXXXXX   GTDHDAALALQLSREWSDEPTNMPPPPVRPQGIPTPYGVG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDRRGRRVALPEQFLRTPGWTGGGAGEVSSDPQVAADAKLAMMLQNEAFQRELQSHPDLAYLGRGSRSGDSRGNAFGMGG+GPSIKEQMTSMGNDIRRKVDELAVRWKMKDPGRADQTTEYSSVPLMSSVDDDADDQAEVVHFSQNNATRRSSSGGSAAGVGVFRADSAGEEQL +
Sbjct:    1 MAEISTEDAVEQLHQMFGDYDKTALANVLEAHGGHVERTVEHLLSNPQAASGXXXXXXXXXXXXXXXASRGTDHDAALALQLSREWSDEPTNMPPPPVRPQGIPTPYGVG-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDRRGRRVALPEQFLRTPGWTGGGAGEVSSDPQVAADAKLAMMLQNEAFQRELQSHPDLAYLGRGSRSGDSRGNAFGMGGDGPSIKEQMTSMGNDIRRKVDELAVRWKMKDPGRADQTTEYSSVPLMSSVDDDADDQAEVVHFSQNNATRRSSSGGSAAGVGVFRADSAGEEQLAD 335
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17504.1 vs. uniprot
Match: A0A836CN65_9STRA (CUE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN65_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.790e-13
Identity = 62/155 (40.00%), Postives = 80/155 (51.61%), Query Frame = 0 
Query:  168 RGRRVALPEQFLRTPGWTGGGAGEVSSDPQVAADAKLAMMLQNEAFQRELQSHPDLA-YLGRGSRSGDSRGNAFGMGGEGPSIKEQMTSMGNDIRRKVDELAVRWKMKDPGRADQTTEYSSVPLMSSVDDDAD-DQAEVVHFSQNNATRRSSSGG 320
            RG  V LP+ FLR PG             QV AD +LA MLQN  F   L +HP+ A Y GR   +  S   A      GPS+ EQ+ +MG D++R +  LA +W +K        +  +SVPLM+     AD D+AEVV F Q + T R  SGG
Sbjct:   84 RGTPVNLPDNFLRVPG------SMTEESAQVQADERLAAMLQNADF---LAAHPEYASYGGRAPAARTSH--AQHAEDTGPSVTEQLQTMGADMKRNLLGLAAKWNLKPSTAPAADSGSASVPLMNRNSTAADEDEAEVVTFDQGDTTTRRGSGG 227
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1U7_ECTSI1.200e-16995.88CUE domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CN65_9STRA2.790e-1340.00CUE domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003892Ubiquitin system component CUESMARTSM00546cue_7coord: 5..47
e-value: 0.0063
score: 25.7
IPR003892Ubiquitin system component CUEPFAMPF02845CUEcoord: 7..46
e-value: 1.9E-9
score: 37.1
IPR003892Ubiquitin system component CUEPROSITEPS51140CUEcoord: 5..48
score: 13.169
NoneNo IPR availableGENE3D1.10.8.10coord: 3..54
e-value: 1.8E-10
score: 42.2
IPR040192CUE domain-containing protein 1PANTHERPTHR13467CUE DOMAIN CONTAINING PROTEIN 1coord: 173..300
coord: 2..45
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 5..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:367900..375724 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17504.1mRNA_E-siliculosus-1a_M_contig95.17504.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig95 367900..377251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig95.17504.1 ID=prot_E-siliculosus-1a_M_contig95.17504.1|Name=mRNA_E-siliculosus-1a_M_contig95.17504.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=394bp
MAEISTEDAVEQLHQMFGDYDKTALATVLEAHGGHVERTVEHLLSNPQAA
AGGGGGGGGGGGSGGGGASSGTDHDAALALQLSREWSDEPTNMPPPPVRP
QGIPTPYGVGGRGGGGGGGGGGGGGGGGGGGAGGVFAAERGSSMAQSAAA
AAASRGGGGGGGGSGDRRGRRVALPEQFLRTPGWTGGGAGEVSSDPQVAA
DAKLAMMLQNEAFQRELQSHPDLAYLGRGSRSGDSRGNAFGMGGEGPSIK
EQMTSMGNDIRRKVDELAVRWKMKDPGRADQTTEYSSVPLMSSVDDDADD
QAEVVHFSQNNATRRSSSGGSAAGVGVFRADSAGEEQLGESGQGDRHVLL
HVSAEVFAVEGACSLANTGVQDLPRAVLTERSMGLVIRWHVCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like_sf
IPR040192CUEDC1
IPR003892CUE