Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17482.1 vs. uniprot
Match:
D7G1S7_ECTSI (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S7_ECTSI)
HSP 1 Score: 443 bits (1140), Expect = 1.000e-152
Identity = 303/344 (88.08%), Postives = 307/344 (89.24%), Query Frame = 0
Query: 48 MLERRVDGGYQIFSPEIERDSPIAAQGGVVARTYERPRGRSLPKWDRTDDAVSTRPPXXXXX---RPASKLGLIGSGFSQQPWNCPACTYLNEDPAFRAACEICNTPRPSTVADAAGTGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPPQIEACIPSGFSVGGGEAGGLPXXXXXVDDNEVDGILGGVSPGGGAFPVVSGADQSASGHCGSATAASASALGGGWEAGDEWQGFGSGSFGQESPVNCSPRQPTKAFEFSFGKSEAXXXXXXXXVGDSTGDGNDGRGVDDVEFGREGCAP 388
MLERRVDGGYQIFSPEIERDSPIAAQ GVVARTYERPRGRSLPKWDRTDDAVSTRP XXXX RPASKLGLIGSGFSQQPWNCPACTYLNEDPAFRAACEICNTPRPS ADA GTG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX APPPQIEACIPSGFSVGGGEAGGLPXXXXXVDDNEVDGILGGVSPGGGAFPVVSGA Q+ASGHCGSATAASA+ALGGGWEAGDEWQGFGSGSFGQESPVNCS RQPTKAFEF+FG SEA XXXXXX VGDSTGDGNDGRGVDDVEFGREGCAP
Sbjct: 1 MLERRVDGGYQIFSPEIERDSPIAAQRGVVARTYERPRGRSLPKWDRTDDAVSTRPAPXXXXXXXRPASKLGLIGSGFSQQPWNCPACTYLNEDPAFRAACEICNTPRPSAAADAVGTGTSGDGGEQRHDDWDDSEVLKSCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPPPQIEACIPSGFSVGGGEAGGLPXXXXXVDDNEVDGILGGVSPGGGAFPVVSGAYQAASGHCGSATAASAAALGGGWEAGDEWQGFGSGSFGQESPVNCSSRQPTKAFEFAFGNSEAGXXXXXX-VGDSTGDGNDGRGVDDVEFGREGCAP 343
BLAST of mRNA_E-siliculosus-1a_M_contig95.17482.1 vs. uniprot
Match:
A0A6H5KBW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW0_9PHAE)
HSP 1 Score: 416 bits (1069), Expect = 2.470e-132
Identity = 294/351 (83.76%), Postives = 302/351 (86.04%), Query Frame = 0
Query: 38 QNKVGGVIVGMLERRVDGGYQIFSPEIERDSPIAAQGGVVARTYERPRGRSLPKWDRTDDAVSTRPPXXXXXRPASKLGLIGSGFSQQPWNCPACTYLNEDPAFRAACEICNTPRPSTVADAAGTGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPPQIEACIPSGFSVGGGEAGGLPXXXXXVDDNEVDGILGGVSPGGGAFPVVSGADQSASGHCGSATAASASALGGGWEAGDEWQGFGSGSFGQESPVNCSPRQPTKAFEFSFGKSEAXXXXXXXXVGDSTGDGNDGRGVDDVEFGREGCAP 388
+ KVGGVIVGMLERRVDGGYQIFSPEIERDSPIAAQ GVVARTYERPRGRSLPKWDR+DDAVSTRP RPASKLGL+GSGFS QPWNCPACTYLNEDPAFRAACEICNTPRPS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PPPQIEACIPSGFSVGGGEAGGLP V+DNEVDGILGG+SPGGGAFPVVS DQ+ S HCGSATAASA+ALGG WEAGDEWQGFGSGSFGQESPV CSPRQP AFEFSF SEA V D GDGNDGRGVD+VEFGREGCAP
Sbjct: 809 KKKVGGVIVGMLERRVDGGYQIFSPEIERDSPIAAQRGVVARTYERPRGRSLPKWDRSDDAVSTRPLPPPPPRPASKLGLVGSGFSHQPWNCPACTYLNEDPAFRAACEICNTPRPSAAXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPQIEACIPSGFSVGGGEAGGLPVGGIEVEDNEVDGILGGISPGGGAFPVVSSTDQAESRHCGSATAASAAALGGSWEAGDEWQGFGSGSFGQESPVKCSPRQPATAFEFSFRNSEAGGGG----VDDGAGDGNDGRGVDNVEFGREGCAP 1148
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17482.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 2
M S R D H A A L G F G V S Y H C Y F F F A F Y P H V R D V P S P F F H F P Q N K V G G V I V G M L E R R V D G G Y Q I F S P E I E R D S P I A A Q G G V V A R T Y E R P R G R S L P K W D R T D D A V S T R P P P P P P P R P A S K L G L I G S G F S Q Q P W N C P A C T Y L N E D P A F R A A C E I C N T P R P S T V A D A A G T G S G G G G G E Q R Y D D W D D N E V L K S C G G G G S R G G G G I P A T A S A M M S S F S P A A P P A V A A G G G P T A F A S S V A A G A G A V A P P P Q I E A C I P S G F S V G G G E A G G L P V G G I E V D D N E V D G I L G G V S P G G G A F P V V S G A D Q S A S G H C G S A T A A S A S A L G G G W E A G D E W Q G F G S G S F G Q E S P V N C S P R Q P T K A F E F S F G K S E A G G G G G G G G V G D S T G D G N D G R G V D D V E F G R E G C A P * 50 100 150 200 250 300 350 Expect = 1.00e-152 / Id = 88.08 Expect = 2.47e-132 / Id = 83.76 Sequence D7G1S7_ECTSI A0A6H5KBW0_9PHAE
Match Name E-value Identity Description
D7G1S7_ECTSI 1.000e-152 88.08 RanBP2-type domain-containing protein n=1 Tax=Ecto... [more] A0A6H5KBW0_9PHAE 2.470e-132 83.76 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
M S R D H A A L G F G V S Y H C Y F F F A F Y P H V R D V P S P F F H F P Q N K V G G V I V G M L E R R V D G G Y Q I F S P E I E R D S P I A A Q G G V V A R T Y E R P R G R S L P K W D R T D D A V S T R P P P P P P P R P A S K L G L I G S G F S Q Q P W N C P A C T Y L N E D P A F R A A C E I C N T P R P S T V A D A A G T G S G G G G G E Q R Y D D W D D N E V L K S C G G G G S R G G G G I P A T A S A M M S S F S P A A P P A V A A G G G P T A F A S S V A A G A G A V A P P P Q I E A C I P S G F S V G G G E A G G L P V G G I E V D D N E V D G I L G G V S P G G G A F P V V S G A D Q S A S G H C G S A T A A S A S A L G G G W E A G D E W Q G F G S G S F G Q E S P V N C S P R Q P T K A F E F S F G K S E A G G G G G G G G V G D S T G D G N D G R G V D D V E F G R E G C A P * 50 100 150 200 250 300 350 Expect = 0.0023 / Score = 27.2 Expect = 1.4E-7 / Score = 33.2 Score = Score = Sequence SM00547 G3DSA:2.20.28.140 TMhelix SSF90209
IPR Term IPR Description Source Source Term Source Description Alignment
IPR001876 Zinc finger, RanBP2-type SMART SM00547 zf_4 coord: 125..151 None No IPR available GENE3D 2.20.28.140 coord: 120..162 None No IPR available TMHMM TMhelix coord: 7..26 IPR036443 Zinc finger, RanBP2-type superfamily SUPERFAMILY 90209 Ran binding protein zinc finger-like coord: 123..152
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_M_contig95.17482.1 ID=prot_E-siliculosus-1a_M_contig95.17482.1|Name=mRNA_E-siliculosus-1a_M_contig95.17482.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=389bp back to top
Annotated Terms
The following terms have been associated with this polypeptide: