prot_E-siliculosus-1a_M_contig95.17485.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17485.1
Unique Nameprot_E-siliculosus-1a_M_contig95.17485.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length456
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17485.1 vs. uniprot
Match: A0A6H5KBW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW0_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 1.350e-75
Identity = 143/180 (79.44%), Postives = 145/180 (80.56%), Query Frame = 0 
Query:  242 EALPQGSGGDPWASSKRQLPLPLQPLAGRCNFRGCGRISVFRCGRCRAAFYCNRDHQRSDWAWHRRVCDEGKGEPPPPLARLVLPAQRQKAVGWADSTRVVPASAADTGGGG------CSPPAWEGGGAGGSXXXXXXRVGGVRHGXGGGFGSGANSAAFRENRSRLEAAMASAAHSPAA 415
            EA P  SGGDPWASSKRQLPLPLQPLAGRCNF GCG+ISVFRC RCRAAFYCNRDHQRSDWAWHRRVCDEGKGEPPPPLARLVLPAQRQKAVGWADST+VVPA               CS PAWEGG AGGS      RV GVRHGX      GANSAAFRENRSRLEAAMASAAHSPAA
Sbjct:  219 EATPHCSGGDPWASSKRQLPLPLQPLAGRCNFEGCGQISVFRCRRCRAAFYCNRDHQRSDWAWHRRVCDEGKGEPPPPLARLVLPAQRQKAVGWADSTKVVPAXXXXXXXXXXXXXXXCSSPAWEGGSAGGSGAKGSGRVEGVRHGXXXXXXXGANSAAFRENRSRLEAAMASAAHSPAA 398
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17485.1 vs. uniprot
Match: D7G1S8_ECTSI (Egl nine homolog 1 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S8_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 1.290e-58
Identity = 102/119 (85.71%), Postives = 105/119 (88.24%), Query Frame = 0 
Query:  279 ISVFRCGRCRAAFYCNRDHQRSDWAWHRRVCDEGKGEPPPPLARLVLPAQRQKAVGWADSTRVVPASAADTG--GGGCSPPAWEGGGAGGSXXXXXXRVGGVRHGXGGGFGSGANSAAF 395
            IS+FRCGRCRAAFYCNRDHQRSDWAWHRRVCDEGKGEPPPPLARLVLPAQ+QKAVGWADSTRVVPASAA     GGG SPPAWEGGGAG +      RVGGVRHG GGGFGSGANSAAF
Sbjct:   30 ISLFRCGRCRAAFYCNRDHQRSDWAWHRRVCDEGKGEPPPPLARLVLPAQKQKAVGWADSTRVVPASAASAADRGGGFSPPAWEGGGAGDNGAKGSGRVGGVRHGGGGGFGSGANSAAF 148
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17485.1 vs. uniprot
Match: A0A0C2CTP1_9DELT (MYND-type domain-containing protein n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A0C2CTP1_9DELT)

HSP 1 Score: 53.1 bits (126), Expect = 2.530e-5
Identity = 18/34 (52.94%), Postives = 26/34 (76.47%), Query Frame = 0 
Query:  276 CGRISVFRCGRCRAAFYCNRDHQRSDWAWHRRVC 309
            CG+ ++ RC RC A FYC ++HQR DWA H+++C
Sbjct:   63 CGKSTIQRCARCAAVFYCGKEHQRRDWARHKKLC 96
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17485.1 vs. uniprot
Match: A0A6A6JJX3_9PLEO (MYND-type zinc finger protein samB n=1 Tax=Westerdykella ornata TaxID=318751 RepID=A0A6A6JJX3_9PLEO)

HSP 1 Score: 56.6 bits (135), Expect = 4.160e-5
Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 0 
Query:  276 CGRISVFRCGRCRAAFYCNRDHQRSDWAWHRRVCDEG 312
            CG+ +  +CGRC+ A+YCNRD QRSDW  HR+ C EG
Sbjct:   12 CGKSASLQCGRCKNAWYCNRDCQRSDWKTHRKDCSEG 48
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17485.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KBW0_9PHAE1.350e-7579.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1S8_ECTSI1.290e-5885.71Egl nine homolog 1 (Partial) (Fragment) n=1 Tax=Ec... [more]
A0A0C2CTP1_9DELT2.530e-552.94MYND-type domain-containing protein n=1 Tax=Enhygr... [more]
A0A6A6JJX3_9PLEO4.160e-559.46MYND-type zinc finger protein samB n=1 Tax=Westerd... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 101..124
NoneNo IPR availableGENE3D3.30.60.180coord: 267..311
e-value: 1.7E-10
score: 42.5
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 270..310
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 275..309
e-value: 4.3E-8
score: 33.1
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 273..309
score: 10.203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:188105..189919 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17485.1mRNA_E-siliculosus-1a_M_contig95.17485.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig95 188105..189919 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig95.17485.1 ID=prot_E-siliculosus-1a_M_contig95.17485.1|Name=mRNA_E-siliculosus-1a_M_contig95.17485.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=456bp
MPAVSDGPLTGAGGGGGGGGKERGSVSLRIRRRRLSFDGAVDRVPRWWEA
AGAEEERGGAIGAAVSGVTAAAAAQQRKRANTWCSSSGSTGSATAVSTSL
LVRAEEEEEEEEEEEMHCRADERNNTEEAAATFVTAAIEAAAAAAAAAAA
AAAAAAAAAAEGEEATSTTASGGGGGGAAAAGEGTTSIPMVASTAKESDS
GAAAAAVAVPTRTTTPATIVSGEAASSEAAAAAEEAVAASSEALPQGSGG
DPWASSKRQLPLPLQPLAGRCNFRGCGRISVFRCGRCRAAFYCNRDHQRS
DWAWHRRVCDEGKGEPPPPLARLVLPAQRQKAVGWADSTRVVPASAADTG
GGGCSPPAWEGGGAGGSGAKGSGRVGGVRHGGGGGFGSGANSAAFRENRS
RLEAAMASAAHSPAAAIDGGGGGGGFDPTHVRTSRGGASWTVPASNDNGG
GAGSAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND