prot_E-siliculosus-1a_M_contig94.17453.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig94.17453.1
Unique Nameprot_E-siliculosus-1a_M_contig94.17453.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length107
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17453.1 vs. uniprot
Match: D7FU30_ECTSI (zf-met2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU30_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 1.890e-16
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 0
Query:    1 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVC 43
            MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVC
Sbjct:    1 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVC 43          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17453.1 vs. uniprot
Match: Y2309_ARATH (Uncharacterized protein At2g23090 n=4 Tax=Camelineae TaxID=980083 RepID=Y2309_ARATH)

HSP 1 Score: 51.6 bits (122), Expect = 1.720e-6
Identity = 31/46 (67.39%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCFIT 46
            MGGGNAQKSA ARA+N  K   AGKGSQL  NK A SI C+VC  T
Sbjct:    1 MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQT 46          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17453.1 vs. uniprot
Match: A4RZ85_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RZ85_OSTLU)

HSP 1 Score: 50.1 bits (118), Expect = 6.860e-6
Identity = 30/43 (69.77%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVC 43
            MGGGNAQKSATAR +   K  KAG GSQLA N  A S VCQVC
Sbjct:    1 MGGGNAQKSATARKKAMEKAQKAGAGSQLAANAKAMSTVCQVC 43          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17453.1 vs. uniprot
Match: UPI0003E681E8 (uncharacterized protein At2g23090 n=2 Tax=Chenopodiaceae TaxID=1804623 RepID=UPI0003E681E8)

HSP 1 Score: 48.9 bits (115), Expect = 1.890e-5
Identity = 33/52 (63.46%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    1 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCFITQNGTST 52
            MGGGNAQKS TAR RN  +K KA KGSQL  NK A SI C+VC  T   T+T
Sbjct:    1 MGGGNAQKSKTARERN-LEKNKASKGSQLDTNKKAMSIQCKVCMQTFMCTTT 51          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17453.1 vs. uniprot
Match: A0A059LL58_9CHLO (zf-met2 domain-containing protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LL58_9CHLO)

HSP 1 Score: 48.5 bits (114), Expect = 2.730e-5
Identity = 31/52 (59.62%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    1 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCFITQNGTST 52
            MGGGNAQK+A ARA+   K AK   GSQL  N AA +IVCQ+C  T   TST
Sbjct:    1 MGGGNAQKTAMARAKKLEKAAKGSAGSQLKSNAAANNIVCQICRSTFICTST 52          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17453.1 vs. uniprot
Match: A0A0K9QNK3_SPIOL (Uncharacterized protein n=3 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0K9QNK3_SPIOL)

HSP 1 Score: 47.8 bits (112), Expect = 5.310e-5
Identity = 31/46 (67.39%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCFIT 46
            MGGGNAQKS TAR RN  +K KA KGSQL  NK A SI C+VC  T
Sbjct:    1 MGGGNAQKSKTARERN-LEKNKASKGSQLDANKKAMSIQCKVCMQT 45          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FU30_ECTSI1.890e-16100.00zf-met2 domain-containing protein n=2 Tax=Ectocarp... [more]
Y2309_ARATH1.720e-667.39Uncharacterized protein At2g23090 n=4 Tax=Cameline... [more]
A4RZ85_OSTLU6.860e-669.77Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]
UPI0003E681E81.890e-563.46uncharacterized protein At2g23090 n=2 Tax=Chenopod... [more]
A0A059LL58_9CHLO2.730e-559.62zf-met2 domain-containing protein n=1 Tax=Helicosp... [more]
A0A0K9QNK3_SPIOL5.310e-567.39Uncharacterized protein n=3 Tax=Chenopodiaceae Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026939ZNF706/At2g23090 superfamilyGENE3D4.10.1050.10coord: 1..69
e-value: 3.3E-15
score: 58.3
NoneNo IPR availablePANTHERPTHR33788:SF13coord: 1..50
NoneNo IPR availableSUPERFAMILY118359Expressed protein At2g23090/F21P24.15coord: 1..52
IPR039713At2g23090-likePANTHERPTHR33788FAMILY NOT NAMEDcoord: 1..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig94contigE-siliculosus-1a_M_contig94:574907..575227 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig94.17453.1mRNA_E-siliculosus-1a_M_contig94.17453.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig94 574420..577918 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig94.17453.1 ID=prot_E-siliculosus-1a_M_contig94.17453.1|Name=mRNA_E-siliculosus-1a_M_contig94.17453.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=107bp
MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCFITQNGT
STSHYISAVMCPRAHQTRRVWVFPLFSWQMRSRWHVCRLQGELALRNVES
LDICSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039713At2g23090-like
IPR026939ZNF706/At2g23090_sf