Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17451.1 vs. uniprot
Match:
A0A6H5KPG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPG0_9PHAE)
HSP 1 Score: 584 bits (1505), Expect = 2.380e-199
Identity = 496/619 (80.13%), Postives = 506/619 (81.74%), Query Frame = 0
Query: 130 MLAARRSSTSAVGVPSQESPRLQQPGSSSLEKTGGLKIANFRSSRRVSSSSKHSILPVIPLPPRLTNRTVGDDVSRRATARVRAASITRGRRTPPQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNDGEEPARSRDISALSTAGEAQVAPGAATAVAAAERQRTSRQQQRQGSAPLHTSSDREKPSHV--NRGRRASGSVAMVSAGASTAAXXXXXXXXXXXXXXXXAGRTEGISMHSDDGGAGRYRRVVTRRSSDTARPAMDLGQKEQAWKRERAQLLTVIKLQHRQLMMRPSSSSSCSWADASPSGDSVGTAXXXXXXXXXXXXXXXXXSPCVSSVTPPPLQPRQRHRPSRPSQSLTPPPAIREAPTITSRPP--------------------------------------PRTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVKCRSDSGSSCPDSSAIAGPTAAPRGFPAESEDGRGXXXXXXXXXXXXXXXX-----NAVTVSPSRRCCVEGRLEVMERNVTAVLRRLDELEKRKSKGGNDDRSVPSTRSDRHVHAV 703
MLAARRSSTSAVGVPSQES RLQQPGSSS+EKTGGLKIANFRSSRRVSSSSKH VGDDVSR+ATA+VRAASITRGRRTPP+AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX ARSR+ SA+STAG Q APGAATAV AAERQR SRQ QRQGSA LH SS R+ PS V NRGRRAS SV MVSAGASTAA XXXXXXXXXXXXXXX GRTEGISMHSDDGGAGRYRRVV RRSSDTARPA+DLGQKEQAWKRERAQLLTVIKLQHRQLMMRPSSSSSCSWAD SPSGDSVGTA XXXXXXXXXXXXXX SP VSSVTPPPLQ RQRHRPSRPSQSLTPPPA REAP ITSRPP RTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVK RSDSGSSCPDS A+AGP AAPRGFPAESED R XXXXXXXXXXXXXXXX NA TVSPSRRCCVEGRLEVMERNV AVLRRLDELEKRKSKGGNDDRSV STRSDRHVHA+
Sbjct: 1 MLAARRSSTSAVGVPSQESSRLQQPGSSSVEKTGGLKIANFRSSRRVSSSSKHR---------------VGDDVSRQATAQVRAASITRGRRTPPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSAPTKXXXXXXXXXXXXXXXXXXXXXXXS----------ARSRNNSAVSTAGVGQAAPGAATAVVAAERQRASRQHQRQGSAHLHMSSGRKNPSRVLENRGRRASRSVTMVSAGASTAACXXXXXXXXXXXXXXXXGRTEGISMHSDDGGAGRYRRVVMRRSSDTARPAVDLGQKEQAWKRERAQLLTVIKLQHRQLMMRPSSSSSCSWADGSPSGDSVGTASXXXXXXXXXXXXXXRSSPYVSSVTPPPLQSRQRHRPSRPSQSLTPPPATREAPIITSRPPRLANDYDEEDSDSTPRAGARPAGXXXXXTAAPVLLSRSERTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVKSRSDSGSSCPDSPAVAGPMAAPRGFPAESEDRRXXXXXXXXXXXXXXXXXXXXXXNAETVSPSRRCCVEGRLEVMERNVKAVLRRLDELEKRKSKGGNDDRSVQSTRSDRHVHAI 594
BLAST of mRNA_E-siliculosus-1a_M_contig94.17451.1 vs. uniprot
Match:
D7FU32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU32_ECTSI)
HSP 1 Score: 278 bits (710), Expect = 1.360e-85
Identity = 205/323 (63.47%), Postives = 207/323 (64.09%), Query Frame = 0
Query: 381 MVSAGASTAAXXXXXXXXXXXXXXXXAGRTEGISMHSDDGGAGRYRRVVTRRSSDTARPAMDLGQKEQAWKRERAQLLTVIKLQHRQLMMRPSSSSSCSWADASPSGDSVGTAXXXXXXXXXXXXXXXXXSPCVSSVTPPPLQPRQRHRPSRPSQSLTPPPAIREAPTITSRPPPRTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVKCRSDSGSSCPDSSAIAGPTAAPRGFPAESEDGRGXXXXXXXXXXXXXXXXNAVTVSPSRRCCVEGRLEVMERNVTAVLRRLDELEKRKSKGGNDDRSVPSTRSDRHVHAV 703
MVSAGASTAA XXXXXXXXXXAG TEGISMHSDDGGAGRYRRVVTRRSSDTARPA+DLGQKEQAWKR RTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVK RSDSGSSCPDSSA+AGPTAAPRGFPAESEDGR XXXXXXXXXXXXXNAVTVSPSRRCCVEGRLEVMERNVTAVLRRLDELEKRKSKGGNDDRSV STRSDRHVHAV
Sbjct: 1 MVSAGASTAACPAAGTXXXXXXXXXXAGWTEGISMHSDDGGAGRYRRVVTRRSSDTARPAVDLGQKEQAWKRSE-----------------------------------------------------------------------------------------------------RTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVKSRSDSGSSCPDSSAVAGPTAAPRGFPAESEDGR-RGGXXXXXXXXXXXXXNAVTVSPSRRCCVEGRLEVMERNVTAVLRRLDELEKRKSKGGNDDRSVHSTRSDRHVHAV 221
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17451.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 2
M S A E L Y E R Q M A W K Q F I S Q R S D E R G R A I V S D V Y R S S M P D R W Q V D P E E N Q G R T T K Q L L P S G T S S S L L A T S R S S R S S S G K A T G M L Q N K A L S S M D G C G G A R E Q H Q Q Q Q R R K R Q D A A S S R H A T T T A T P A P S Y S S M L A A R R S S T S A V G V P S Q E S P R L Q Q P G S S S L E K T G G L K I A N F R S S R R V S S S S K H S I L P V I P L P P R L T N R T V G D D V S R R A T A R V R A A S I T R G R R T P P Q A A A G G D K G E H G A I E E T A T T V T T T K T A A A A A A A A A A A A A A A A A A A A A D P P L V L R R A V S A P T K S R A G S S N S S S S S G G G G G D D G N D G E E P A R S R D I S A L S T A G E A Q V A P G A A T A V A A A E R Q R T S R Q Q Q R Q G S A P L H T S S D R E K P S H V N R G R R A S G S V A M V S A G A S T A A C S T A D T A A A A T A A A A A A G R T E G I S M H S D D G G A G R Y R R V V T R R S S D T A R P A M D L G Q K E Q A W K R E R A Q L L T V I K L Q H R Q L M M R P S S S S S C S W A D A S P S G D S V G T A S T A A T T A P P A E P A S P R S S P C V S S V T P P P L Q P R Q R H R P S R P S Q S L T P P P A I R E A P T I T S R P P P R T H L L G R V E L Q R E K A A A R G V G R L Q A G R G R G L A S A G S V K C R S D S G S S C P D S S A I A G P T A A P R G F P A E S E D G R G G G G S C C D D S G G G G G G G N A V T V S P S R R C C V E G R L E V M E R N V T A V L R R L D E L E K R K S K G G N D D R S V P S T R S D R H V H A V * 100 200 300 400 500 600 700 Expect = 2.38e-199 / Id = 80.13 Expect = 1.36e-85 / Id = 63.47 Sequence A0A6H5KPG0_9PHAE D7FU32_ECTSI
Match Name E-value Identity Description
A0A6H5KPG0_9PHAE 2.380e-199 80.13 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more] D7FU32_ECTSI 1.360e-85 63.47 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
M S A E L Y E R Q M A W K Q F I S Q R S D E R G R A I V S D V Y R S S M P D R W Q V D P E E N Q G R T T K Q L L P S G T S S S L L A T S R S S R S S S G K A T G M L Q N K A L S S M D G C G G A R E Q H Q Q Q Q R R K R Q D A A S S R H A T T T A T P A P S Y S S M L A A R R S S T S A V G V P S Q E S P R L Q Q P G S S S L E K T G G L K I A N F R S S R R V S S S S K H S I L P V I P L P P R L T N R T V G D D V S R R A T A R V R A A S I T R G R R T P P Q A A A G G D K G E H G A I E E T A T T V T T T K T A A A A A A A A A A A A A A A A A A A A A D P P L V L R R A V S A P T K S R A G S S N S S S S S G G G G G D D G N D G E E P A R S R D I S A L S T A G E A Q V A P G A A T A V A A A E R Q R T S R Q Q Q R Q G S A P L H T S S D R E K P S H V N R G R R A S G S V A M V S A G A S T A A C S T A D T A A A A T A A A A A A G R T E G I S M H S D D G G A G R Y R R V V T R R S S D T A R P A M D L G Q K E Q A W K R E R A Q L L T V I K L Q H R Q L M M R P S S S S S C S W A D A S P S G D S V G T A S T A A T T A P P A E P A S P R S S P C V S S V T P P P L Q P R Q R H R P S R P S Q S L T P P P A I R E A P T I T S R P P P R T H L L G R V E L Q R E K A A A R G V G R L Q A G R G R G L A S A G S V K C R S D S G S S C P D S S A I A G P T A A P R G F P A E S E D G R G G G G S C C D D S G G G G G G G N A V T V S P S R R C C V E G R L E V M E R N V T A V L R R L D E L E K R K S K G G N D D R S V P S T R S D R H V H A V * 100 200 300 400 500 600 700 Score = Score = Score = Sequence Coil PTHR23148:SF2 PTHR23148
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 660..680 None No IPR available PANTHER PTHR23148:SF2 coord: 60..340 None No IPR available PANTHER PTHR23148 SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN coord: 60..340
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_M_contig94.17451.1 ID=prot_E-siliculosus-1a_M_contig94.17451.1|Name=mRNA_E-siliculosus-1a_M_contig94.17451.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=704bp back to top