prot_E-siliculosus-1a_M_contig94.17451.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig94.17451.1
Unique Name	prot_E-siliculosus-1a_M_contig94.17451.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	704

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig94.17451.1 vs. uniprot
Match: A0A6H5KPG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPG0_9PHAE)

HSP 1 Score: 584 bits (1505), Expect = 2.380e-199
Identity = 496/619 (80.13%), Postives = 506/619 (81.74%), Query Frame = 0

Query:  130 MLAARRSSTSAVGVPSQESPRLQQPGSSSLEKTGGLKIANFRSSRRVSSSSKHSILPVIPLPPRLTNRTVGDDVSRRATARVRAASITRGRRTPPQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNDGEEPARSRDISALSTAGEAQVAPGAATAVAAAERQRTSRQQQRQGSAPLHTSSDREKPSHV--NRGRRASGSVAMVSAGASTAAXXXXXXXXXXXXXXXXAGRTEGISMHSDDGGAGRYRRVVTRRSSDTARPAMDLGQKEQAWKRERAQLLTVIKLQHRQLMMRPSSSSSCSWADASPSGDSVGTAXXXXXXXXXXXXXXXXXSPCVSSVTPPPLQPRQRHRPSRPSQSLTPPPAIREAPTITSRPP--------------------------------------PRTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVKCRSDSGSSCPDSSAIAGPTAAPRGFPAESEDGRGXXXXXXXXXXXXXXXX-----NAVTVSPSRRCCVEGRLEVMERNVTAVLRRLDELEKRKSKGGNDDRSVPSTRSDRHVHAV 703
            MLAARRSSTSAVGVPSQES RLQQPGSSS+EKTGGLKIANFRSSRRVSSSSKH                VGDDVSR+ATA+VRAASITRGRRTPP+AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXX           ARSR+ SA+STAG  Q APGAATAV AAERQR SRQ QRQGSA LH SS R+ PS V  NRGRRAS SV MVSAGASTAA XXXXXXXXXXXXXXX GRTEGISMHSDDGGAGRYRRVV RRSSDTARPA+DLGQKEQAWKRERAQLLTVIKLQHRQLMMRPSSSSSCSWAD SPSGDSVGTA XXXXXXXXXXXXXX  SP VSSVTPPPLQ RQRHRPSRPSQSLTPPPA REAP ITSRPP                                       RTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVK RSDSGSSCPDS A+AGP AAPRGFPAESED R XXXXXXXXXXXXXXXX     NA TVSPSRRCCVEGRLEVMERNV AVLRRLDELEKRKSKGGNDDRSV STRSDRHVHA+
Sbjct:    1 MLAARRSSTSAVGVPSQESSRLQQPGSSSVEKTGGLKIANFRSSRRVSSSSKHR---------------VGDDVSRQATAQVRAASITRGRRTPPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSAPTKXXXXXXXXXXXXXXXXXXXXXXXS----------ARSRNNSAVSTAGVGQAAPGAATAVVAAERQRASRQHQRQGSAHLHMSSGRKNPSRVLENRGRRASRSVTMVSAGASTAACXXXXXXXXXXXXXXXXGRTEGISMHSDDGGAGRYRRVVMRRSSDTARPAVDLGQKEQAWKRERAQLLTVIKLQHRQLMMRPSSSSSCSWADGSPSGDSVGTASXXXXXXXXXXXXXXRSSPYVSSVTPPPLQSRQRHRPSRPSQSLTPPPATREAPIITSRPPRLANDYDEEDSDSTPRAGARPAGXXXXXTAAPVLLSRSERTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVKSRSDSGSSCPDSPAVAGPMAAPRGFPAESEDRRXXXXXXXXXXXXXXXXXXXXXXNAETVSPSRRCCVEGRLEVMERNVKAVLRRLDELEKRKSKGGNDDRSVQSTRSDRHVHAI 594

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BLAST of mRNA_E-siliculosus-1a_M_contig94.17451.1 vs. uniprot
Match: D7FU32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU32_ECTSI)

HSP 1 Score: 278 bits (710), Expect = 1.360e-85
Identity = 205/323 (63.47%), Postives = 207/323 (64.09%), Query Frame = 0

Query:  381 MVSAGASTAAXXXXXXXXXXXXXXXXAGRTEGISMHSDDGGAGRYRRVVTRRSSDTARPAMDLGQKEQAWKRERAQLLTVIKLQHRQLMMRPSSSSSCSWADASPSGDSVGTAXXXXXXXXXXXXXXXXXSPCVSSVTPPPLQPRQRHRPSRPSQSLTPPPAIREAPTITSRPPPRTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVKCRSDSGSSCPDSSAIAGPTAAPRGFPAESEDGRGXXXXXXXXXXXXXXXXNAVTVSPSRRCCVEGRLEVMERNVTAVLRRLDELEKRKSKGGNDDRSVPSTRSDRHVHAV 703
            MVSAGASTAA      XXXXXXXXXXAG TEGISMHSDDGGAGRYRRVVTRRSSDTARPA+DLGQKEQAWKR                                                                                                       RTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVK RSDSGSSCPDSSA+AGPTAAPRGFPAESEDGR    XXXXXXXXXXXXXNAVTVSPSRRCCVEGRLEVMERNVTAVLRRLDELEKRKSKGGNDDRSV STRSDRHVHAV
Sbjct:    1 MVSAGASTAACPAAGTXXXXXXXXXXAGWTEGISMHSDDGGAGRYRRVVTRRSSDTARPAVDLGQKEQAWKRSE-----------------------------------------------------------------------------------------------------RTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVKSRSDSGSSCPDSSAVAGPTAAPRGFPAESEDGR-RGGXXXXXXXXXXXXXNAVTVSPSRRCCVEGRLEVMERNVTAVLRRLDELEKRKSKGGNDDRSVHSTRSDRHVHAV 221

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig94.17451.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig94.17451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KPG0_9PHAE	2.380e-199	80.13	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FU32_ECTSI	1.360e-85	63.47	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 660..680
None	No IPR available	PANTHER	PTHR23148:SF2		coord: 60..340
None	No IPR available	PANTHER	PTHR23148	SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN	coord: 60..340

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig94	contig	E-siliculosus-1a_M_contig94:561940..567294 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig94.17451.1	mRNA_E-siliculosus-1a_M_contig94.17451.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig94 561940..567294 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig94.17451.1 ID=prot_E-siliculosus-1a_M_contig94.17451.1|Name=mRNA_E-siliculosus-1a_M_contig94.17451.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=704bp
MSAELYERQMAWKQFISQRSDERGRAIVSDVYRSSMPDRWQVDPEENQGR
TTKQLLPSGTSSSLLATSRSSRSSSGKATGMLQNKALSSMDGCGGAREQH
QQQQRRKRQDAASSRHATTTATPAPSYSSMLAARRSSTSAVGVPSQESPR
LQQPGSSSLEKTGGLKIANFRSSRRVSSSSKHSILPVIPLPPRLTNRTVG
DDVSRRATARVRAASITRGRRTPPQAAAGGDKGEHGAIEETATTVTTTKT
AAAAAAAAAAAAAAAAAAAAADPPLVLRRAVSAPTKSRAGSSNSSSSSGG
GGGDDGNDGEEPARSRDISALSTAGEAQVAPGAATAVAAAERQRTSRQQQ
RQGSAPLHTSSDREKPSHVNRGRRASGSVAMVSAGASTAACSTADTAAAA
TAAAAAAGRTEGISMHSDDGGAGRYRRVVTRRSSDTARPAMDLGQKEQAW
KRERAQLLTVIKLQHRQLMMRPSSSSSCSWADASPSGDSVGTASTAATTA
PPAEPASPRSSPCVSSVTPPPLQPRQRHRPSRPSQSLTPPPAIREAPTIT
SRPPPRTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVKCRSDSGS
SCPDSSAIAGPTAAPRGFPAESEDGRGGGGSCCDDSGGGGGGGNAVTVSP
SRRCCVEGRLEVMERNVTAVLRRLDELEKRKSKGGNDDRSVPSTRSDRHV
HAV*