Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17439.1 vs. uniprot
Match:
D8LN07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN07_ECTSI)
HSP 1 Score: 790 bits (2040), Expect = 1.160e-286
Identity = 423/463 (91.36%), Postives = 429/463 (92.66%), Query Frame = 0
Query: 2 EDKQLSVRFSGSVDSGPRISSSDDDGESEWEAFDAAFRGQTASMKEPAATATPARVTLARRPFKENQRAANNGRARTHRSDSAASSSAEDLRVLPPTRAGLHGSNSSPAGQLAPGYDGDNDHVGTSQRPYRHHQVAGSATSHLHENDFNNKYRTHHHQTGAVLQPARL-------DSALATPNSSSPSVLNDTSRAFAWSVLLHGCLCEAPLAVLEGLARGPLYLVAAAWVALVASVGASGHAHHHRAGLRKHAAALAREGFLLLAASLTLAVPFATSFTVYGEVVVDRALDEDEASWDVRPVPTVLGAVDPLRFCVFAFGQAGELAANGRPEPLQQPFSELPGGGYGLRTTGPGGYAEGFRPANYDDGXXXXXXXXXSNKPPSILYVGAIAAQSMDADRMGVGILHPPEELGLRLRQAAAHGKRAVVSAYRRLANSATATYHRRLPTLSSTVVTRLGNTPSG 457
EDKQLSVRFSGSVDSGPR SSSDDDGESEWEAFDAAFRG+TASM +PAATATP RVTLARRPFKENQRAA+ GRARTHR+DSAASSSAEDLRVL PTRAGLHGSNSSPAGQLAPGYDGDNDHVGTSQRPYRHH VAGSATSHLHENDFNNKYRTHHHQTGAVLQPAR D+ ATPNSSSPS LNDTSRAF WSVLLHGCLCEAPLAVLEGLARGPLYLVAAAWVALVASVGASGHAHHHRAGLRKHAAALAREG LLLAASLTLAVPFATSFTVYGEVVVDRALDE+EASWDVRPVPTVLGAVDPLRFCVFAFGQAGELAANGRPEPLQQPFSEL GGGYGLRTTGPGGYAEGFRPANYDDG SNKPPSILYVGAIAAQSMDADRMGVGILHPPEELGLRLRQAAA GKRAVVSAYRRLA SATATYHRRLPTLSST VTRLGN SG
Sbjct: 2 EDKQLSVRFSGSVDSGPRSSSSDDDGESEWEAFDAAFRGKTASMTDPAATATPGRVTLARRPFKENQRAAS-GRARTHRTDSAASSSAEDLRVLAPTRAGLHGSNSSPAGQLAPGYDGDNDHVGTSQRPYRHHHVAGSATSHLHENDFNNKYRTHHHQTGAVLQPARRLPLYHHNDATQATPNSSSPSALNDTSRAFVWSVLLHGCLCEAPLAVLEGLARGPLYLVAAAWVALVASVGASGHAHHHRAGLRKHAAALAREGLLLLAASLTLAVPFATSFTVYGEVVVDRALDEEEASWDVRPVPTVLGAVDPLRFCVFAFGQAGELAANGRPEPLQQPFSELTGGGYGLRTTGPGGYAEGFRPANYDDGDGGGR----SNKPPSILYVGAIAAQSMDADRMGVGILHPPEELGLRLRQAAAQGKRAVVSAYRRLAYSATATYHRRLPTLSSTAVTRLGNMSSG 459
BLAST of mRNA_E-siliculosus-1a_M_contig94.17439.1 vs. uniprot
Match:
A0A6H5KPM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPM1_9PHAE)
HSP 1 Score: 708 bits (1828), Expect = 1.710e-254
Identity = 387/455 (85.05%), Postives = 407/455 (89.45%), Query Frame = 0
Query: 2 EDKQLSVRFSGSVDSGPRISSS-DDDGESEWEAFDAAFRGQTASMKEPAATATPARVTLARRPFKENQRAANNGRARTHRSDSAASSSAEDLRVLPPTRAGLHGSNSSPAGQLAPGYDGDNDHVGTSQRPYRHHQVAGSATSHLHENDFNNKYRTHHHQTGAVLQPARL-------DSALATPNSSSPSVLNDTSRAFAWSVLLHGCLCEAPLAVLEGLARGPLYLVAAAWVALVASVGASGHAHHHRAGLRKHAAALAREGFLLLAASLTLAVPFATSFTVYGEVVVDRALDEDEASWDVRPVPTVLGAVDPLRFCVFAFGQAGELAANGRPEPLQQPFSELPGGGYGLRTTGPGGYAEGFRPANYDDGXXXXXXXXXSNKPPSILYVGAIAAQSMDADRMGVGILHPPEELGLRLRQAAAHGKRAVVSAYRRLANSATATYHRRLPTLSSTVV 448
EDKQLSVRFSGSVDSGPRISSS DDDGESEWEAFDAAFRG+TASM EPA+T TPARVTLARRPFKENQRAA+ GRARTHR++SAASSSAED+R+L PTRAG HG +SS A QLAPGYDG++DH+GTSQRP+RHHQV GS TSHLHENDFNNK+RT+H QTGAVLQ AR D A AT +SSSPSVLNDTSRAFAWSVLLHGCLCEAPLAVLEGLARGPLYLVA+AWVALVASVGASGHAHHHRAGLRKHAAALAREG LLLAASLTLAVPFATSFTVYGEVV RALDE+EASWDVRPVPTVLGAVDPLRFCVFAFGQAGELAANGRPEPLQQPFSEL GGG+ LRT+ PG AEGFRP NYDDG SNKPPSI YVGAIAAQSMDADRMGVG+LHPPEEL LRLRQAAAHGKRAVVSAYRRLANSA ATYHRRLPT SS V
Sbjct: 2 EDKQLSVRFSGSVDSGPRISSSSDDDGESEWEAFDAAFRGKTASMTEPASTPTPARVTLARRPFKENQRAAS-GRARTHRTNSAASSSAEDMRLLAPTRAGFHGRSSSSAEQLAPGYDGESDHIGTSQRPHRHHQVVGSTTSHLHENDFNNKHRTNH-QTGAVLQSARRLPLYNHNDYAQATSSSSSPSVLNDTSRAFAWSVLLHGCLCEAPLAVLEGLARGPLYLVASAWVALVASVGASGHAHHHRAGLRKHAAALAREGLLLLAASLTLAVPFATSFTVYGEVVAGRALDEEEASWDVRPVPTVLGAVDPLRFCVFAFGQAGELAANGRPEPLQQPFSELTGGGHSLRTSSPGVCAEGFRPTNYDDGGSGGGGR--SNKPPSIRYVGAIAAQSMDADRMGVGMLHPPEELKLRLRQAAAHGKRAVVSAYRRLANSAAATYHRRLPTFSSNAV 452
BLAST of mRNA_E-siliculosus-1a_M_contig94.17439.1 vs. uniprot
Match:
A0A7S2RB02_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RB02_9STRA)
HSP 1 Score: 56.6 bits (135), Expect = 5.630e-5
Identity = 42/124 (33.87%), Postives = 59/124 (47.58%), Query Frame = 0
Query: 203 EAPLAVLEGLARGPLYLVAAAWVALVASVGASGHAHHHRAGLR-------KHAAALAREGFLLLAASLTLAVPFATSFTVYGEVVVDRALDEDEASWDVRPVPTVLGAVDPLRFCVFAFGQAGE 319
EAPLAV E + R +YL AA+++ +V+ + A +H+ ALARE +P SF VY R + W + P+PTVLG+VDP RF F+ GQ G+
Sbjct: 185 EAPLAVAEAVCRAIVYLFAASFILVVSGMYYLAEAXXXXXEDEPLWLLSFRHSQALAREALXXXXXXXXXXIP-CCSFFVY------RDFRPEADDWQLSPLPTVLGSVDPRRFVAFSLGQGGD 301
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17439.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 3
Q E D K Q L S V R F S G S V D S G P R I S S S D D D G E S E W E A F D A A F R G Q T A S M K E P A A T A T P A R V T L A R R P F K E N Q R A A N N G R A R T H R S D S A A S S S A E D L R V L P P T R A G L H G S N S S P A G Q L A P G Y D G D N D H V G T S Q R P Y R H H Q V A G S A T S H L H E N D F N N K Y R T H H H Q T G A V L Q P A R L D S A L A T P N S S S P S V L N D T S R A F A W S V L L H G C L C E A P L A V L E G L A R G P L Y L V A A A W V A L V A S V G A S G H A H H H R A G L R K H A A A L A R E G F L L L A A S L T L A V P F A T S F T V Y G E V V V D R A L D E D E A S W D V R P V P T V L G A V D P L R F C V F A F G Q A G E L A A N G R P E P L Q Q P F S E L P G G G Y G L R T T G P G G Y A E G F R P A N Y D D G G G G G G G G G R S N K P P S I L Y V G A I A A Q S M D A D R M G V G I L H P P E E L G L R L R Q A A A H G K R A V V S A Y R R L A N S A T A T Y H R R L P T L S S T V V T R L G N T P S G * 50 100 150 200 250 300 350 400 450 Expect = 1.16e-286 / Id = 91.36 Expect = 1.71e-254 / Id = 85.05 Expect = 5.63e-5 / Id = 33.87 Sequence D8LN07_ECTSI A0A6H5KPM1_9PHAE A0A7S2RB02_9STRA back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
Q E D K Q L S V R F S G S V D S G P R I S S S D D D G E S E W E A F D A A F R G Q T A S M K E P A A T A T P A R V T L A R R P F K E N Q R A A N N G R A R T H R S D S A A S S S A E D L R V L P P T R A G L H G S N S S P A G Q L A P G Y D G D N D H V G T S Q R P Y R H H Q V A G S A T S H L H E N D F N N K Y R T H H H Q T G A V L Q P A R L D S A L A T P N S S S P S V L N D T S R A F A W S V L L H G C L C E A P L A V L E G L A R G P L Y L V A A A W V A L V A S V G A S G H A H H H R A G L R K H A A A L A R E G F L L L A A S L T L A V P F A T S F T V Y G E V V V D R A L D E D E A S W D V R P V P T V L G A V D P L R F C V F A F G Q A G E L A A N G R P E P L Q Q P F S E L P G G G Y G L R T T G P G G Y A E G F R P A N Y D D G G G G G G G G G R S N K P P S I L Y V G A I A A Q S M D A D R M G V G I L H P P E E L G L R L R Q A A A H G K R A V V S A Y R R L A N S A T A T Y H R R L P T L S S T V V T R L G N T P S G * 50 100 150 200 250 300 350 400 450 Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence TRANSMEMBRANE CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE TRANSMEMBRANE TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 215..235 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 236..255 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..189 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 210..214 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 277..457 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 256..276 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 190..209 None No IPR available TMHMM TMhelix coord: 255..277 None No IPR available TMHMM TMhelix coord: 215..234
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_M_contig94.17439.1 ID=prot_E-siliculosus-1a_M_contig94.17439.1|Name=mRNA_E-siliculosus-1a_M_contig94.17439.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=458bp back to top