prot_E-siliculosus-1a_M_contig94.17439.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig94.17439.1
Unique Nameprot_E-siliculosus-1a_M_contig94.17439.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length458
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig94.17439.1 vs. uniprot
Match: D8LN07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN07_ECTSI)

HSP 1 Score: 790 bits (2040), Expect = 1.160e-286
Identity = 423/463 (91.36%), Postives = 429/463 (92.66%), Query Frame = 0 
Query:    2 EDKQLSVRFSGSVDSGPRISSSDDDGESEWEAFDAAFRGQTASMKEPAATATPARVTLARRPFKENQRAANNGRARTHRSDSAASSSAEDLRVLPPTRAGLHGSNSSPAGQLAPGYDGDNDHVGTSQRPYRHHQVAGSATSHLHENDFNNKYRTHHHQTGAVLQPARL-------DSALATPNSSSPSVLNDTSRAFAWSVLLHGCLCEAPLAVLEGLARGPLYLVAAAWVALVASVGASGHAHHHRAGLRKHAAALAREGFLLLAASLTLAVPFATSFTVYGEVVVDRALDEDEASWDVRPVPTVLGAVDPLRFCVFAFGQAGELAANGRPEPLQQPFSELPGGGYGLRTTGPGGYAEGFRPANYDDGXXXXXXXXXSNKPPSILYVGAIAAQSMDADRMGVGILHPPEELGLRLRQAAAHGKRAVVSAYRRLANSATATYHRRLPTLSSTVVTRLGNTPSG 457
            EDKQLSVRFSGSVDSGPR SSSDDDGESEWEAFDAAFRG+TASM +PAATATP RVTLARRPFKENQRAA+ GRARTHR+DSAASSSAEDLRVL PTRAGLHGSNSSPAGQLAPGYDGDNDHVGTSQRPYRHH VAGSATSHLHENDFNNKYRTHHHQTGAVLQPAR        D+  ATPNSSSPS LNDTSRAF WSVLLHGCLCEAPLAVLEGLARGPLYLVAAAWVALVASVGASGHAHHHRAGLRKHAAALAREG LLLAASLTLAVPFATSFTVYGEVVVDRALDE+EASWDVRPVPTVLGAVDPLRFCVFAFGQAGELAANGRPEPLQQPFSEL GGGYGLRTTGPGGYAEGFRPANYDDG         SNKPPSILYVGAIAAQSMDADRMGVGILHPPEELGLRLRQAAA GKRAVVSAYRRLA SATATYHRRLPTLSST VTRLGN  SG
Sbjct:    2 EDKQLSVRFSGSVDSGPRSSSSDDDGESEWEAFDAAFRGKTASMTDPAATATPGRVTLARRPFKENQRAAS-GRARTHRTDSAASSSAEDLRVLAPTRAGLHGSNSSPAGQLAPGYDGDNDHVGTSQRPYRHHHVAGSATSHLHENDFNNKYRTHHHQTGAVLQPARRLPLYHHNDATQATPNSSSPSALNDTSRAFVWSVLLHGCLCEAPLAVLEGLARGPLYLVAAAWVALVASVGASGHAHHHRAGLRKHAAALAREGLLLLAASLTLAVPFATSFTVYGEVVVDRALDEEEASWDVRPVPTVLGAVDPLRFCVFAFGQAGELAANGRPEPLQQPFSELTGGGYGLRTTGPGGYAEGFRPANYDDGDGGGR----SNKPPSILYVGAIAAQSMDADRMGVGILHPPEELGLRLRQAAAQGKRAVVSAYRRLAYSATATYHRRLPTLSSTAVTRLGNMSSG 459
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BLAST of mRNA_E-siliculosus-1a_M_contig94.17439.1 vs. uniprot
Match: A0A6H5KPM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPM1_9PHAE)

HSP 1 Score: 708 bits (1828), Expect = 1.710e-254
Identity = 387/455 (85.05%), Postives = 407/455 (89.45%), Query Frame = 0 
Query:    2 EDKQLSVRFSGSVDSGPRISSS-DDDGESEWEAFDAAFRGQTASMKEPAATATPARVTLARRPFKENQRAANNGRARTHRSDSAASSSAEDLRVLPPTRAGLHGSNSSPAGQLAPGYDGDNDHVGTSQRPYRHHQVAGSATSHLHENDFNNKYRTHHHQTGAVLQPARL-------DSALATPNSSSPSVLNDTSRAFAWSVLLHGCLCEAPLAVLEGLARGPLYLVAAAWVALVASVGASGHAHHHRAGLRKHAAALAREGFLLLAASLTLAVPFATSFTVYGEVVVDRALDEDEASWDVRPVPTVLGAVDPLRFCVFAFGQAGELAANGRPEPLQQPFSELPGGGYGLRTTGPGGYAEGFRPANYDDGXXXXXXXXXSNKPPSILYVGAIAAQSMDADRMGVGILHPPEELGLRLRQAAAHGKRAVVSAYRRLANSATATYHRRLPTLSSTVV 448
            EDKQLSVRFSGSVDSGPRISSS DDDGESEWEAFDAAFRG+TASM EPA+T TPARVTLARRPFKENQRAA+ GRARTHR++SAASSSAED+R+L PTRAG HG +SS A QLAPGYDG++DH+GTSQRP+RHHQV GS TSHLHENDFNNK+RT+H QTGAVLQ AR        D A AT +SSSPSVLNDTSRAFAWSVLLHGCLCEAPLAVLEGLARGPLYLVA+AWVALVASVGASGHAHHHRAGLRKHAAALAREG LLLAASLTLAVPFATSFTVYGEVV  RALDE+EASWDVRPVPTVLGAVDPLRFCVFAFGQAGELAANGRPEPLQQPFSEL GGG+ LRT+ PG  AEGFRP NYDDG         SNKPPSI YVGAIAAQSMDADRMGVG+LHPPEEL LRLRQAAAHGKRAVVSAYRRLANSA ATYHRRLPT SS  V
Sbjct:    2 EDKQLSVRFSGSVDSGPRISSSSDDDGESEWEAFDAAFRGKTASMTEPASTPTPARVTLARRPFKENQRAAS-GRARTHRTNSAASSSAEDMRLLAPTRAGFHGRSSSSAEQLAPGYDGESDHIGTSQRPHRHHQVVGSTTSHLHENDFNNKHRTNH-QTGAVLQSARRLPLYNHNDYAQATSSSSSPSVLNDTSRAFAWSVLLHGCLCEAPLAVLEGLARGPLYLVASAWVALVASVGASGHAHHHRAGLRKHAAALAREGLLLLAASLTLAVPFATSFTVYGEVVAGRALDEEEASWDVRPVPTVLGAVDPLRFCVFAFGQAGELAANGRPEPLQQPFSELTGGGHSLRTSSPGVCAEGFRPTNYDDGGSGGGGR--SNKPPSIRYVGAIAAQSMDADRMGVGMLHPPEELKLRLRQAAAHGKRAVVSAYRRLANSAAATYHRRLPTFSSNAV 452
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BLAST of mRNA_E-siliculosus-1a_M_contig94.17439.1 vs. uniprot
Match: A0A7S2RB02_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RB02_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 5.630e-5
Identity = 42/124 (33.87%), Postives = 59/124 (47.58%), Query Frame = 0 
Query:  203 EAPLAVLEGLARGPLYLVAAAWVALVASVGASGHAHHHRAGLR-------KHAAALAREGFLLLAASLTLAVPFATSFTVYGEVVVDRALDEDEASWDVRPVPTVLGAVDPLRFCVFAFGQAGE 319
            EAPLAV E + R  +YL AA+++ +V+ +     A               +H+ ALARE            +P   SF VY      R    +   W + P+PTVLG+VDP RF  F+ GQ G+
Sbjct:  185 EAPLAVAEAVCRAIVYLFAASFILVVSGMYYLAEAXXXXXEDEPLWLLSFRHSQALAREALXXXXXXXXXXIP-CCSFFVY------RDFRPEADDWQLSPLPTVLGSVDPRRFVAFSLGQGGD 301
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LN07_ECTSI1.160e-28691.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPM1_9PHAE1.710e-25485.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2RB02_9STRA5.630e-533.87Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 215..235
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 236..255
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..189
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 210..214
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 277..457
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..276
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 190..209
NoneNo IPR availableTMHMMTMhelixcoord: 255..277
NoneNo IPR availableTMHMMTMhelixcoord: 215..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig94contigE-siliculosus-1a_M_contig94:469820..471193 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig94.17439.1mRNA_E-siliculosus-1a_M_contig94.17439.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig94 469820..471193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig94.17439.1 ID=prot_E-siliculosus-1a_M_contig94.17439.1|Name=mRNA_E-siliculosus-1a_M_contig94.17439.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=458bp
QEDKQLSVRFSGSVDSGPRISSSDDDGESEWEAFDAAFRGQTASMKEPAA
TATPARVTLARRPFKENQRAANNGRARTHRSDSAASSSAEDLRVLPPTRA
GLHGSNSSPAGQLAPGYDGDNDHVGTSQRPYRHHQVAGSATSHLHENDFN
NKYRTHHHQTGAVLQPARLDSALATPNSSSPSVLNDTSRAFAWSVLLHGC
LCEAPLAVLEGLARGPLYLVAAAWVALVASVGASGHAHHHRAGLRKHAAA
LAREGFLLLAASLTLAVPFATSFTVYGEVVVDRALDEDEASWDVRPVPTV
LGAVDPLRFCVFAFGQAGELAANGRPEPLQQPFSELPGGGYGLRTTGPGG
YAEGFRPANYDDGGGGGGGGGRSNKPPSILYVGAIAAQSMDADRMGVGIL
HPPEELGLRLRQAAAHGKRAVVSAYRRLANSATATYHRRLPTLSSTVVTR
LGNTPSG*
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