prot_E-siliculosus-1a_M_contig94.17438.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig94.17438.1
Unique Nameprot_E-siliculosus-1a_M_contig94.17438.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length343
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig94.17438.1 vs. uniprot
Match: A0A6H5KWU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU5_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 1.620e-91
Identity = 312/353 (88.39%), Postives = 321/353 (90.93%), Query Frame = 0 
Query:    1 MYCLTPPLKRAPKGDWLCPKCAKKVLDASGDDDVPASASTTGAARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------QEMRLAALAVLXXXXXXXXXPANNANGMVDANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTEEEKEXXXXXDICLVCCEVRDPDRILRCSNCSGGGSGMGIYHNECLPKPLESMPAEGEWVCPRCVTKKRKHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---KPRRAWSANMEALLATAVKKMGAGKWKEMEEDPEFDFEGMPANALKQKWRTLSQKRRN 342
            +YCL+PPLKRAPKGDWLCPKC +KVLDASGDDDVPASASTTG ARK        XXXXXXXXXXXXXXXXXXXXXXXX        QEMRLAAL   XXXXXXXXX ANNANG+V ANXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TEEE+E     DICLVCCEVRDPDRILRCS+CSGGGSGMGIYHNECLPKPL+SMPAEGEWVCPRCVTKKRKHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   KPRRAWSA+MEALLATAVKK+GAGKWKEMEEDPEFDFEGMPANALKQKWRTLSQKRRN
Sbjct: 1179 VYCLSPPLKRAPKGDWLCPKCVEKVLDASGDDDVPASASTTGPARKGKGSSASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQQEMRLAALXXXXXXXXXXXXLANNANGVVGANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEEEEEE----DICLVCCEVRDPDRILRCSSCSGGGSGMGIYHNECLPKPLDSMPAEGEWVCPRCVTKKRKHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKPRRAWSASMEALLATAVKKVGAGKWKEMEEDPEFDFEGMPANALKQKWRTLSQKRRN 1527
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BLAST of mRNA_E-siliculosus-1a_M_contig94.17438.1 vs. uniprot
Match: D8LN06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN06_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 1.660e-77
Identity = 215/262 (82.06%), Postives = 221/262 (84.35%), Query Frame = 0 
Query:   81 MRLAALAVLXXXXXXXXXPANNANGMVDANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTEEEKEXXXXXDICLVCCEVRDPDRILRCSNCSGGGSGMGIYHNECLPKPLESMPAEGEWVCPRCVTKKRKHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPRRAWSANMEALLATAVKKMGAGKWKEMEEDPEFDFEGMPANALKQKWRTLSQKRRN 342
            MRLAALAVL         PANNANG+VDAN               XXXXXXXXXXXXXX TEEE+E     DICLVCCEVRDPDRILRCSNCSGGGSGMGIYHNECLPKPLESMPAEGEWVCPRCVTKKRKHG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      PRRAWS++MEALLATAVKKMGAGKWKEMEEDPEFDFEGMPANAL+QKWRTLSQKRR+
Sbjct:    1 MRLAALAVLEESSEDNEEPANNANGVVDANESGEETESDGPEATAXXXXXXXXXXXXXXXTEEEEEE----DICLVCCEVRDPDRILRCSNCSGGGSGMGIYHNECLPKPLESMPAEGEWVCPRCVTKKRKHGGPGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------PRRAWSSSMEALLATAVKKMGAGKWKEMEEDPEFDFEGMPANALRQKWRTLSQKRRS 252
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17438.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWU5_9PHAE1.620e-9188.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN06_ECTSI1.660e-7782.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 57..89
NoneNo IPR availableGENE3D1.10.10.60coord: 282..341
e-value: 3.1E-8
score: 35.0
NoneNo IPR availablePANTHERPTHR47162FAMILY NOT NAMEDcoord: 150..215
coord: 1..72
NoneNo IPR availablePANTHERPTHR47162:SF3coord: 150..215
coord: 1..72
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..30
e-value: 4.2E-6
score: 28.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 137..224
e-value: 9.5E-15
score: 56.0
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 282..337
score: 6.063
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 151..208
score: 8.867
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 1..26
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 142..211
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 285..336

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig94contigE-siliculosus-1a_M_contig94:465115..468567 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig94.17438.1mRNA_E-siliculosus-1a_M_contig94.17438.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig94 464907..469749 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig94.17438.1 ID=prot_E-siliculosus-1a_M_contig94.17438.1|Name=mRNA_E-siliculosus-1a_M_contig94.17438.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=343bp
MYCLTPPLKRAPKGDWLCPKCAKKVLDASGDDDVPASASTTGAARKGKGS
SASKATAKGASAAAAAAKEEEARKEREQQEMRLAALAVLEESSEDNEEPA
NNANGMVDANESGEETESDGPEATAARRGDDAGSNAEADGTEEEKEEEEE
EDICLVCCEVRDPDRILRCSNCSGGGSGMGIYHNECLPKPLESMPAEGEW
VCPRCVTKKRKHGGSGAGGSKPTAGKNTGGGKEGGSKKAAAAAAAAAAAA
SAAASKKRKVPSREDAGGGGADGGGGGEEGGGAKKPRRAWSANMEALLAT
AVKKMGAGKWKEMEEDPEFDFEGMPANALKQKWRTLSQKRRN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR011011Znf_FYVE_PHD
IPR019787Znf_PHD-finger
IPR017877Myb-like_dom
IPR013083Znf_RING/FYVE/PHD