prot_E-siliculosus-1a_M_contig94.17419.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig94.17419.1
Unique Name	prot_E-siliculosus-1a_M_contig94.17419.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	983

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig94.17419.1 vs. uniprot
Match: D7FIQ7_ECTSI (GRAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIQ7_ECTSI)

HSP 1 Score: 1512 bits (3915), Expect = 0.000e+0
Identity = 895/971 (92.17%), Postives = 907/971 (93.41%), Query Frame = 0

Query:   15 MASAGSFVHGTGASEERVRQSKEEQDIADFMSSIDDXXXXXXXXXXVLRGGRSSAGDGGDIFLGSLSPPALPQVTGTSAAGELVVDDGKAIADAFPADWLNDFEGLGLGVQGKTGSSAAPATAS-QPIHSSPQGQHPHQXXXXXXXXXXHQQHRDATIQNNETGEVLGEEPEILDNVDEGYGSGAAAAGMLMSAGGRMVSWAANTPASLVDAATGAFRGDAHHAVSRNAGGDLGNGRAAAASTDADELPLDWQGTLDMVGMAEAETDTKGTSALAAAPVSELPSLPPPAAREGGFPDFVEIRDPRNVSQFPKPDNALVAKAAAGGEGDGQAGQXXXDSGEHAAAAGQEHGQRRVLPAPLRTVEVYLRPDVTWDSVSDVYMGVMLSRGLVVRHQTEKMVTAEKSADAPGDWATVKLTVGVTRDKLRTLVIQFYADTRKQAPILSLAGTIARFSGRTGDDLYTAIRDVLVERQMPLSFLATDAEEVSLDPHYVRDLVGMYAHENVVNLTRYALPLEEFVRQEEERLARLEATLLPQYRAYGLAPPRPTRSKPLSAYPLTTRRPPVSACGVEEAREVMERAREHVRGGGGNSFPPQNKGVDVDDENAFXXXXXXXXXXXXXXXXXXXXXXXX--SVAEGIRSLIRATWEDVKEWCDEEAEARVRRKDAQVRDRLVAVEGHREALIAALRDGAGGSAASSTSAGREFAARFRPMAKEAVLCQCKAVHAKRVGKLYLTCNHVCFHSSVLGFTSQRVLPLLTVATISHASSVLGMDLVTLVDRGGEEHSFGITAVEAGFPERFHDLLKQCLVLCKADASRRAAQREGAAASEREPDEEQILARVQRLAKAKQLXXXXXXXXXXXXXXXXXXPTSAAAVDMAPPAASPHSRPGYPRPEESEVAERDTGASVGGGVVEGGAGRAMGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGSMMAMGIQAFLEESQKRS 982
            MASAGSFVHGTGASEERVRQSKEEQDIADFMSSIDD          VLRGGRSS G GGDIFLGSLSPPAL QVTGTSAAGEL+ DDGKAIADAFPADWLNDFEG+GLGVQGKT SSAA ATA+ QPIHSSPQGQ    XXXXXXXXXX  QHRDATIQNNETGEVLGEEP+ILDNVDEGYGSGAAAAGMLMSAGGRMVSWAANTPASLVDAATGAFRGDAHHAVSRNAGGDLGNG AAAASTDADELPLDWQGTLDMVGMAEAETDTKGTSALA APVSELPSLPPPAAREGGFPDFVEIRDPRNVSQFPKPDNALVAKAAAGG GDGQAGQ  X+SGEHAAAAGQE GQR VLPAPLRTVEVYLRPDVTW+SVSDVYMGVMLSRGLVVRHQTEKMVTAEKSADAPGDWATVKLTVGVTRDKLRTLVIQFYADTRKQAPILSLAGTIARFSGRTGDDLYTAIR+VLVERQMPLSFLATDAEEVSLDPHYVRDLVGMYAHENVVNLTRYALPLEEFVRQEEERLARLEATLLPQYRA GLAPPRPTRSKPLSAYPLTTRRPPVSACGVEEAREVMERAREHVRGGG +SFPPQ KGVDVDDEN F    XXXXXXXXXX            SVAEGIRSLIRATWEDVKEWCDEEAEARVRRKDAQVRDRL+AVEGHREALIAALRDGAGGSAASST AGREFAARFRPMAKEAVLCQCKAVHAKRVG+LYLTCNHVCFHSSVLGFTSQRVLPLLTVATISHASSVLGMDL+TLVDRGG+EHSFGITAVEAGFPERFHDLLKQCLVLCKADASRRAAQREGAAASEREPDEEQILARVQRLAKAKQL XXXXXXXXXXXXXXXXX       DMAPPAASPHSRPGYPRPEESE AERDTGASVGGGVVEGGAG AM   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGSMMAMGIQAFLEESQKRS
Sbjct:    1 MASAGSFVHGTGASEERVRQSKEEQDIADFMSSIDDTASGGSTTTSVLRGGRSSVGKGGDIFLGSLSPPALQQVTGTSAAGELLADDGKAIADAFPADWLNDFEGIGLGVQGKTDSSAASATATAQPIHSSPQGQXXXXXXXXXXXXXXXXQHRDATIQNNETGEVLGEEPQILDNVDEGYGSGAAAAGMLMSAGGRMVSWAANTPASLVDAATGAFRGDAHHAVSRNAGGDLGNGSAAAASTDADELPLDWQGTLDMVGMAEAETDTKGTSALAVAPVSELPSLPPPAAREGGFPDFVEIRDPRNVSQFPKPDNALVAKAAAGGGGDGQAGQGAXESGEHAAAAGQERGQRHVLPAPLRTVEVYLRPDVTWESVSDVYMGVMLSRGLVVRHQTEKMVTAEKSADAPGDWATVKLTVGVTRDKLRTLVIQFYADTRKQAPILSLAGTIARFSGRTGDDLYTAIRNVLVERQMPLSFLATDAEEVSLDPHYVRDLVGMYAHENVVNLTRYALPLEEFVRQEEERLARLEATLLPQYRACGLAPPRPTRSKPLSAYPLTTRRPPVSACGVEEAREVMERAREHVRGGG-DSFPPQ-KGVDVDDENVFASGGXXXXXXXXXXDEGRGAKVGSGSSVAEGIRSLIRATWEDVKEWCDEEAEARVRRKDAQVRDRLLAVEGHREALIAALRDGAGGSAASSTPAGREFAARFRPMAKEAVLCQCKAVHAKRVGQLYLTCNHVCFHSSVLGFTSQRVLPLLTVATISHASSVLGMDLLTLVDRGGQEHSFGITAVEAGFPERFHDLLKQCLVLCKADASRRAAQREGAAASEREPDEEQILARVQRLAKAKQLRXXXXXXXXXXXXXXXXXXXXXXXXDMAPPAASPHSRPGYPRPEESEFAERDTGASVGGGVVEGGAGGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGSMMAMGIQAFLEESQKRS 969

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BLAST of mRNA_E-siliculosus-1a_M_contig94.17419.1 vs. uniprot
Match: A0A7S2F8A2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F8A2_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.070e-5
Identity = 44/131 (33.59%), Postives = 68/131 (51.91%), Query Frame = 0

Query:  651 LIRATWEDVKEWCDEEAEARVRRKDAQVRDRLVAVEGHREALIAALRDGAGGSAASSTSAGREFAARFRPMAKEAVLCQCKAVHAK-----RVGKLYLTCNHVCFHS--SVLGFTSQRVLPLLTVATISHA 774
            ++RA W  +   C+EEA AR+ RK   V  RL A+EG+R A+++ L + +  +        R F  RFR +A EA+L  C AV  +     R G++Y+T  H+ F     +L   +Q  +P  T+  I  A
Sbjct:   69 VVRALWRLLGSKCEEEARARMARKQKVVTQRLQAIEGYRSAVVSKLANRSQQNRTELIGVERAFRGRFR-VADEALLVDCAAVVTEADGKQRKGRVYVTMGHLWFDDPGGLLTSPTQTPIPFYTIHEIGKA 198

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig94.17419.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig94.17419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FIQ7_ECTSI	0.000e+0	92.17	GRAM domain-containing protein n=2 Tax=Ectocarpus ...	[more]
A0A7S2F8A2_9STRA	1.070e-5	33.59	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 855..875
None	No IPR available	PANTHER	PTHR23202	WASP INTERACTING PROTEIN-RELATED	coord: 39..964
IPR004182	GRAM domain	PFAM	PF02893	GRAM	coord: 735..780 e-value: 2.5E-5 score: 24.1

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig94	contig	E-siliculosus-1a_M_contig94:244190..249918 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig94.17419.1	mRNA_E-siliculosus-1a_M_contig94.17419.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig94 244190..249918 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig94.17419.1 ID=prot_E-siliculosus-1a_M_contig94.17419.1|Name=mRNA_E-siliculosus-1a_M_contig94.17419.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=983bp
HGHLFSRGVQGFAVMASAGSFVHGTGASEERVRQSKEEQDIADFMSSIDD
TTSGGSTTTSVLRGGRSSAGDGGDIFLGSLSPPALPQVTGTSAAGELVVD
DGKAIADAFPADWLNDFEGLGLGVQGKTGSSAAPATASQPIHSSPQGQHP
HQQQQQQQDEDDHQQHRDATIQNNETGEVLGEEPEILDNVDEGYGSGAAA
AGMLMSAGGRMVSWAANTPASLVDAATGAFRGDAHHAVSRNAGGDLGNGR
AAAASTDADELPLDWQGTLDMVGMAEAETDTKGTSALAAAPVSELPSLPP
PAAREGGFPDFVEIRDPRNVSQFPKPDNALVAKAAAGGEGDGQAGQGAGD
SGEHAAAAGQEHGQRRVLPAPLRTVEVYLRPDVTWDSVSDVYMGVMLSRG
LVVRHQTEKMVTAEKSADAPGDWATVKLTVGVTRDKLRTLVIQFYADTRK
QAPILSLAGTIARFSGRTGDDLYTAIRDVLVERQMPLSFLATDAEEVSLD
PHYVRDLVGMYAHENVVNLTRYALPLEEFVRQEEERLARLEATLLPQYRA
YGLAPPRPTRSKPLSAYPLTTRRPPVSACGVEEAREVMERAREHVRGGGG
NSFPPQNKGVDVDDENAFASGGGGGGEGGEGRGSGAGSGSSSSVAEGIRS
LIRATWEDVKEWCDEEAEARVRRKDAQVRDRLVAVEGHREALIAALRDGA
GGSAASSTSAGREFAARFRPMAKEAVLCQCKAVHAKRVGKLYLTCNHVCF
HSSVLGFTSQRVLPLLTVATISHASSVLGMDLVTLVDRGGEEHSFGITAV
EAGFPERFHDLLKQCLVLCKADASRRAAQREGAAASEREPDEEQILARVQ
RLAKAKQLREAREAASAAASRATAATPTSAAAVDMAPPAASPHSRPGYPR
PEESEVAERDTGASVGGGVVEGGAGRAMGAGGGSAEAEAGDEGSGGGQDE
GAGRGARGGGGRSGSMMAMGIQAFLEESQKRS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004182	GRAM