prot_E-siliculosus-1a_M_contig94.17406.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig94.17406.1
Unique Nameprot_E-siliculosus-1a_M_contig94.17406.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length288
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17406.1 vs. uniprot
Match: D7FIP3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP3_ECTSI)

HSP 1 Score: 511 bits (1315), Expect = 5.620e-182
Identity = 271/285 (95.09%), Postives = 275/285 (96.49%), Query Frame = 0
Query:    4 MEGFHSQKKSLRRRLIMNTLVGFLSCHDGTAFVPAAHRLGDGMSAIRSTTSRLTFPAHRSPPGMTTSDVGLHHDDKQTGKAKTSAWSGACRTAAACLATAAILSSSLPAGAASGTGGVSH-LDGGRGSSPANVLMVLADEGDFSSAGGRADVSQLVLELKKADRPDTLLNSMVKINDVVDGDEDGVLENPFAAESIVKGLIDKRRAGGEAWDSNTETAFGILKRKLDPFNVVLLRPYLKIAPFLGGAYYLAVFFVQQKFRGFFPYAYFGAVAVFVAPALIVILAN 287
            M+GFHSQKKSLRR L M+TLVGFLSCHDGTAFVPAAH LG GMSAIRSTTSRLTFPAHRSPPGMTTSD GLHHDDKQTG+AKTSAWSGACRTAAACLATAAILSSSLPAGAASG+ GV H LDGGRGSSPANVLMVLADEGDFSSA GRADVSQLVLELKKADRPDTLLNSMVKINDVVD DEDGVLENPFAAESIVKGLIDKRRAGGEAWDSNTETAFGILKRKLDPFNVVLLRPYLKIAPFLGGAYYLAVFFVQQKFRGFFPYAYFGAVAVFVAPALIVILAN
Sbjct:    1 MDGFHSQKKSLRR-LTMHTLVGFLSCHDGTAFVPAAHMLGGGMSAIRSTTSRLTFPAHRSPPGMTTSDGGLHHDDKQTGEAKTSAWSGACRTAAACLATAAILSSSLPAGAASGSRGVRHHLDGGRGSSPANVLMVLADEGDFSSADGRADVSQLVLELKKADRPDTLLNSMVKINDVVDWDEDGVLENPFAAESIVKGLIDKRRAGGEAWDSNTETAFGILKRKLDPFNVVLLRPYLKIAPFLGGAYYLAVFFVQQKFRGFFPYAYFGAVAVFVAPALIVILAN 284          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17406.1 vs. uniprot
Match: A0A836CGK9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGK9_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.180e-35
Identity = 71/141 (50.35%), Postives = 94/141 (66.67%), Query Frame = 0
Query:  148 AGGRADVSQLVLELKKADRPDTLLNSMVKINDVVDGDEDGVLENPFAAESIVKGLIDKRRAG---GEAWDSNTETAFGILKRKLDPFNVVLLRPYLKIAPFLGGAYYLAVFFVQQKFRGFFPYAYFGAVAVFVAPALIVIL 285
            A   AD+   + EL +A   D  L +MVK+N+++D D DG +ENP A E +V+GL  K+R     GE W  + + A+G+L+R+LDP+N   LRPYL +APFLGG YYLA FFVQQKF   FP AYF  V VFVAP L +++
Sbjct:    5 ASAEADMDGALAELSRAKDADQTLTAMVKVNEILDSD-DGTMENPLAREIVVRGLSAKKREARTTGE-WRDDIDFAYGVLRRRLDPYNTFALRPYLGVAPFLGGLYYLAAFFVQQKFPEAFPLAYFSLVGVFVAPILFLLV 143          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17406.1 vs. uniprot
Match: A0A7S2XUD1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUD1_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 4.780e-21
Identity = 53/149 (35.57%), Postives = 84/149 (56.38%), Query Frame = 0
Query:  137 MVLADEGDFSSAGGRADVSQLVLELKKADRPDTLLNSMVKINDVVDGDEDGVLENPFAAESIVKGLIDKRRAGGEAWDSNTETAFGILKRKLDPFNVVLLRPYLKIAPFLGGAYYLAVFFVQQKFRGFFPYAYFGAVAVFVAPALIVIL 285
            M   ++G+   +     VS+ +  LK ++ P  + N++  I +++  DEDG L      + +V+ + +K+ +    W +  E  F ++KRKLDP+N V+L PYLK+APF+GGA YLA+ +VQQ     F YAY      F AP  I+ L
Sbjct:  106 MQRGEQGESGQSVSVGTVSEAIEALKSSEGPRQISNALEGIYNLIQ-DEDGPLVETADKKLVVQKVREKKASSQAVWTAENEIEFSVIKRKLDPYNTVVLGPYLKVAPFVGGAIYLALIWVQQSLPRVFDYAYIVGALAFAAPIFIIAL 253          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17406.1 vs. uniprot
Match: A0A6T5PVA6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5PVA6_HETAK)

HSP 1 Score: 89.7 bits (221), Expect = 1.070e-17
Identity = 54/137 (39.42%), Postives = 80/137 (58.39%), Query Frame = 0
Query:  154 VSQLVLELKKADRP-DTLLNSMVKINDVVDGDEDGVLENPFAAESIVKGLIDKR-RAGGEAWDSNTETAFGILKRKLDPFNVVLLRPYLKIAPFLGGAYYLAVFFVQQKFRG-FFPYAYFGAVAVFVAPALIVILAN 287
            VSQ+V ++K   +  D+++    ++N + D DE  VL +P   + +V+ LI+K+     E WD      +GILKRKLDP+N V L  YL +AP+LGG  YLA+  VQ+   G  F  AY      F APA+++ LA+
Sbjct:   95 VSQIVTDIKTQQKDTDSIIGLFAEVNRMADDDE--VLIDPKDRKEVVRALIEKKANQADEKWDEQVYNGYGILKRKLDPYNTVALGGYLSVAPYLGGLLYLALVAVQRALPGRAFDVAYVVGALAFFAPAVLLALAS 229          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17406.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FIP3_ECTSI5.620e-18295.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CGK9_9STRA1.180e-3550.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XUD1_9STRA4.780e-2135.57Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6T5PVA6_HETAK1.070e-1739.42Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..41
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 239..257
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..238
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 258..263
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 287..287
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 264..286
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 22..29
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..29
score: 5.0
NoneNo IPR availableTMHMMTMhelixcoord: 235..257
NoneNo IPR availableTMHMMTMhelixcoord: 264..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig94contigE-siliculosus-1a_M_contig94:124374..126833 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig94.17406.1mRNA_E-siliculosus-1a_M_contig94.17406.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig94 124315..127554 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig94.17406.1 ID=prot_E-siliculosus-1a_M_contig94.17406.1|Name=mRNA_E-siliculosus-1a_M_contig94.17406.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=288bp
MKTMEGFHSQKKSLRRRLIMNTLVGFLSCHDGTAFVPAAHRLGDGMSAIR
STTSRLTFPAHRSPPGMTTSDVGLHHDDKQTGKAKTSAWSGACRTAAACL
ATAAILSSSLPAGAASGTGGVSHLDGGRGSSPANVLMVLADEGDFSSAGG
RADVSQLVLELKKADRPDTLLNSMVKINDVVDGDEDGVLENPFAAESIVK
GLIDKRRAGGEAWDSNTETAFGILKRKLDPFNVVLLRPYLKIAPFLGGAY
YLAVFFVQQKFRGFFPYAYFGAVAVFVAPALIVILAN*
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