prot_E-siliculosus-1a_M_contig94.17404.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig94.17404.1
Unique Name	prot_E-siliculosus-1a_M_contig94.17404.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	212

Homology

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17404.1 vs. uniprot
Match: A0A6H5KEB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB2_9PHAE)

HSP 1 Score: 389 bits (999), Expect = 2.620e-136
Identity = 204/211 (96.68%), Postives = 207/211 (98.10%), Query Frame = 0

Query:    1 MLGGNVVVVVSALLATSSTFVSSLVHSRSTTQLSRGWSAWRRRSPSGTRRNSETGRRRELTCGLQITVRIRGKKSREEDYTNQQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 211
            MLGGNVVVVVSALLATS+TFVSSLVHSRSTTQLSR  SAWRRRSPSGTRR SETGR+RELTCGLQITVRIRGKKSREEDYTNQ AYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDF+FSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE
Sbjct:    1 MLGGNVVVVVSALLATSTTFVSSLVHSRSTTQLSRESSAWRRRSPSGTRRYSETGRKRELTCGLQITVRIRGKKSREEDYTNQ-AYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 210

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17404.1 vs. uniprot
Match: D7FIP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIP1_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 1.630e-86
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0

Query:   82 NQQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 211
            ++QAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE
Sbjct:   60 SKQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 189

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17404.1 vs. uniprot
Match: W7TG35_9STRA (Ribosomal rna large subunit methyltransferase h n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG35_9STRA)

HSP 1 Score: 184 bits (467), Expect = 2.300e-55
Identity = 92/150 (61.33%), Postives = 113/150 (75.33%), Query Frame = 0

Query:   62 CGLQITVRIRGKKSREEDYTNQQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 211
            CGLQ+T+ IRGK+S  E++ N  AY EY KRLRPVL L T WHKTD +LEAA+ K+   V+CLDEGG+Q++S   +D L+ +LEEGG+RL+ V+GGAEGLPP L+          SLS +TFTH WAR LLAEQIYRASEI+RGS YHKE
Sbjct:   69 CGLQVTIHIRGKRSGGEEFLND-AYLEYTKRLRPVLGLTTVWHKTDSELEAAIAKEKAPVICLDEGGKQLSSMELADILYKRLEEGGARLSLVIGGAEGLPPRLRASKE----LWSLSRLTFTHQWARVLLAEQIYRASEIKRGSGYHKE 213

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17404.1 vs. uniprot
Match: A0A835ZC53_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC53_9STRA)

HSP 1 Score: 170 bits (430), Expect = 2.550e-50
Identity = 85/150 (56.67%), Postives = 110/150 (73.33%), Query Frame = 0

Query:   61 TCGLQITVRIRGKKSREEDYTNQQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 210
            TCG ++T+ IRGK   EE       +DEY KRLRP L L T WHKTD D+EAAV ++   V+C+DE G+Q++S +FS++L+ KLE GGSRL FV+GGAEGLP  +K +  +   K+SLS M  TH WA ALL+EQIYRA+EIR+G+KYHK
Sbjct:   27 TCGPRVTIHIRGK---EERGFLADGHDEYVKRLRPTLQLTTVWHKTDSDMEAAVFREQCPVICMDERGKQLDSTSFSEYLYKKLEIGGSRLAFVIGGAEGLPASMKAEKSYD--KMSLSKMVLTHTWAWALLSEQIYRATEIRKGTKYHK 171

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17404.1 vs. uniprot
Match: A0A7S2UUR8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUR8_9STRA)

HSP 1 Score: 167 bits (422), Expect = 7.440e-49
Identity = 87/159 (54.72%), Postives = 111/159 (69.81%), Query Frame = 0

Query:   52 SETGRRRELTCGLQITVRIRGKKSREEDYTNQQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 210
            S   +R  +TCGL++T+ IRGKKS  ED+ +    DEY KRLR  L L T+W+K D  L   V+K+ GV+V LDE G+ +NS  FS  ++  LE+GGSRL FV+GGAEGLPP LK +  H    +SLS MTFTH  AR +LAEQIYRA+EIR+G+ YHK
Sbjct:   37 SRAPKRGFMTCGLEVTIHIRGKKSGGEDWIST-GIDEYQKRLRSTLKLQTKWYKDDSALIQGVKKEKGVIVTLDERGKLLNSKEFSQMMYKMLEDGGSRLHFVIGGAEGLPPSLKTEAKH---LISLSKMTFTHQQARLILAEQIYRATEIRKGTGYHK 191

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17404.1 vs. uniprot
Match: A0A7S2R9V3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9V3_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.940e-40
Identity = 77/126 (61.11%), Postives = 89/126 (70.63%), Query Frame = 0

Query:   86 YDEYAKRLRPV-LALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 210
            Y EY KRL+P  + L T WH+TD  L AAV      V+CLD  G Q +S  FSD LFSKLE+GGSRL FV+GGAEGLPP LK+     G  +SLS +TFTH  AR LLAEQ+YRA+EIRRGS YHK
Sbjct:   12 YAEYEKRLKPQQVELVTVWHRTDQQLLAAVEGSKAPVICLDPTGAQWSSERFSDMLFSKLEDGGSRLMFVIGGAEGLPPELKRS----GNLMSLSKLTFTHQMARMLLAEQVYRAAEIRRGSGYHK 133

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17404.1 vs. uniprot
Match: A0A7S2F628_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F628_9STRA)

HSP 1 Score: 134 bits (336), Expect = 9.280e-36
Identity = 76/167 (45.51%), Postives = 112/167 (67.07%), Query Frame = 0

Query:   51 NSETGRRRELTCGLQITVRIRGKKSREEDYTNQQAYDEYAKRLRPV-LALDTQWHKTDDDLEAAVR---KDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQK--PPHGGAK-LSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 210
            N+    R+ +T  LQ+T+ I+G+K  +    N+ A+++YA RL P  + L T WHK++D L  A++   ++P   +CLD  G+Q++S  F   L+ +L EGGSRL FV+GGAEGLP  +++K  P     + +SLSSMTFTH  AR +LAEQ+YRA+EIR+G+ YHK
Sbjct:   41 NNNRSGRQCITAALQVTLHIQGRKINDH---NEVAFEQYAMRLTPHRIQLKTVWHKSNDQLTKAIKATSREP--CICLDVCGQQLDSGGFEQLLYQRLVEGGSRLAFVIGGAEGLPDEVREKKDPKLQHVEFISLSSMTFTHQMARVILAEQVYRAAEIRKGTGYHK 202

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17404.1 vs. uniprot
Match: UPI001BC8D685 (23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH n=1 Tax=Parachlamydia sp. AcF125 TaxID=2795736 RepID=UPI001BC8D685)

HSP 1 Score: 125 bits (314), Expect = 3.150e-33
Identity = 69/126 (54.76%), Postives = 86/126 (68.25%), Query Frame = 0

Query:   85 AYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 210
            A +EY KRL+  + ++  W K D  L A V ++P +VVCLD  G+ ++S  FS FL  KLEEGGSRLTFV+GGAEGLP  LKQ        +SLS +TFTH  AR +L EQIYRA EI +GS+YHK
Sbjct:   20 AIEEYQKRLQGQVEMEWVWAKDDPQLMALVSREP-LVVCLDPQGKMLSSEQFSSFLMRKLEEGGSRLTFVIGGAEGLPLFLKQNKE----AISLSLLTFTHQIARVVLIEQIYRALEIAKGSRYHK 140

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17404.1 vs. uniprot
Match: A0A7W1YWG3_9BACT (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1YWG3_9BACT)

HSP 1 Score: 124 bits (312), Expect = 6.120e-33
Identity = 67/126 (53.17%), Postives = 81/126 (64.29%), Query Frame = 0

Query:   85 AYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 210
            A +EY KRL P+  L  QW K D  L     K+P +++CLD  G  ++S  FS FL  KL+ GGSRLTF++GGA+GLP  LK  P      LSLS MTFTH   R +L EQIYRA EI RGS+YHK
Sbjct:   20 ALNEYVKRLTPIATLSFQWAKDDQHLLDIALKEP-LLICLDPQGSSLSSEEFSSFLHQKLQLGGSRLTFIIGGADGLPTTLKSSP-----LLSLSKMTFTHQITRLILVEQIYRAFEIARGSQYHK 139

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig94.17404.1 vs. uniprot
Match: A0A7S2XIV0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIV0_9STRA)

HSP 1 Score: 126 bits (317), Expect = 8.320e-33
Identity = 74/161 (45.96%), Postives = 101/161 (62.73%), Query Frame = 0

Query:   57 RRELTCGLQITVRIRGKKSREEDYTNQQAYDEYAKRLRPV-LALDTQWHKTDDDLEAAVRKDPG---VVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQ---KPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 210
            R  L  G+++ +RI G+K+  E +  + AY  Y  RLRP  + ++T WHK D +L   V+ D      VV LD  G+   S  FS+ +++ L++GGSRL+FV+GGAEGLP  L+     P       SLS++TFTH +AR LL EQIYRASEIR+GS YHK
Sbjct:   52 RSSLCMGMEVRIRIVGRKNGSEKWL-EDAYSMYETRLRPSNIDVETIWHKNDQELIKGVKGDSDKGHTVVLLDPRGKPRTSEQFSENMYTWLDQGGSRLSFVIGGAEGLPYELRDGSYNPKKSLILFSLSALTFTHQFARTLLMEQIYRASEIRKGSGYHK 211

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig94.17404.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig94.17404.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KEB2_9PHAE	2.620e-136	96.68	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FIP1_ECTSI	1.630e-86	98.46	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
W7TG35_9STRA	2.300e-55	61.33	Ribosomal rna large subunit methyltransferase h n=...	[more]
A0A835ZC53_9STRA	2.550e-50	56.67	Alpha/beta knot methyltransferase n=1 Tax=Tribonem...	[more]
A0A7S2UUR8_9STRA	7.440e-49	54.72	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A7S2R9V3_9STRA	2.940e-40	61.11	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2F628_9STRA	9.280e-36	45.51	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
UPI001BC8D685	3.150e-33	54.76	23S rRNA (pseudouridine(1915)-N(3))-methyltransfer...	[more]
A0A7W1YWG3_9BACT	6.120e-33	53.17	Ribosomal RNA large subunit methyltransferase H n=...	[more]
A0A7S2XIV0_9STRA	8.320e-33	45.96	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003742	RNA methyltransferase RlmH	PFAM	PF02590	SPOUT_MTase	coord: 68..209 e-value: 2.0E-28 score: 99.3
IPR003742	RNA methyltransferase RlmH	PANTHER	PTHR33603	FAMILY NOT NAMED	coord: 101..210
IPR003742	RNA methyltransferase RlmH	HAMAP	MF_00658	23SrRNA_methyltr_H	coord: 64..210 score: 20.661
IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	GENE3D	3.40.1280.10		coord: 65..211 e-value: 1.1E-33 score: 118.1
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 28..211
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..27
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..27
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..23 score: 0.616
IPR029028	Alpha/beta knot methyltransferases	SUPERFAMILY	75217	alpha/beta knot	coord: 79..209

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig94	contig	E-siliculosus-1a_M_contig94:116203..118670 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig94.17404.1	mRNA_E-siliculosus-1a_M_contig94.17404.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig94 116107..118710 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig94.17404.1 ID=prot_E-siliculosus-1a_M_contig94.17404.1|Name=mRNA_E-siliculosus-1a_M_contig94.17404.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=212bp
MLGGNVVVVVSALLATSSTFVSSLVHSRSTTQLSRGWSAWRRRSPSGTRR
NSETGRRRELTCGLQITVRIRGKKSREEDYTNQQAYDEYAKRLRPVLALD
TQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSR
LTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRAS
EIRRGSKYHKE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029028	Alpha/beta_knot_MTases
IPR029026	tRNA_m1G_MTases_N
IPR003742	RlmH-like