prot_E-siliculosus-1a_M_contig93.17378.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig93.17378.1
Unique Name	prot_E-siliculosus-1a_M_contig93.17378.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	227

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig93.17378.1 vs. uniprot
Match: D8LSS0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSS0_ECTSI)

HSP 1 Score: 386 bits (992), Expect = 4.520e-135
Identity = 193/204 (94.61%), Postives = 196/204 (96.08%), Query Frame = 0

Query:   26 MIQAGVGAAALERGEEGSLIAGTEPRRKGWVAPALAAAVGVALLLVCGLSAH-AREDASAAGAA--PMQASTDSVPSCSLLSCTSSGCDWDGAPFLCLDGGSAGGCADSASTWTGGDGCTSFCDLSGCADTLENTGVDDLPRRCLECDETQCSTLAGHPSQACGSTVPFMCLSGAATWGCANNELAWASTPSTTCGECCDVRGC 226
            MIQAG GAAALERGEEGSLIAGTEPRRKGWV PALAAAVGVALLL CGLSAH AREDASAAGAA  PMQASTDSVPSCSLLSCTSSGCDWDGAPFLCLDGGSAGGCADSASTW+GGDGCTSFCDLSGCADTLENTGVDDLPRRCLECDETQCS LAGHPSQACGSTVPF+CLSGAATWGCA+NELAWASTPSTTCGECCDV GC
Sbjct:    1 MIQAGAGAAALERGEEGSLIAGTEPRRKGWVVPALAAAVGVALLLACGLSAHHAREDASAAGAAATPMQASTDSVPSCSLLSCTSSGCDWDGAPFLCLDGGSAGGCADSASTWSGGDGCTSFCDLSGCADTLENTGVDDLPRRCLECDETQCSNLAGHPSQACGSTVPFVCLSGAATWGCADNELAWASTPSTTCGECCDVSGC 204

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig93.17378.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig93.17378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LSS0_ECTSI	4.520e-135	94.61	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 77..226
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 55..76
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..54
None	No IPR available	TMHMM	TMhelix		coord: 55..77

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig93	contig	E-siliculosus-1a_M_contig93:544110..546324 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig93.17378.1	mRNA_E-siliculosus-1a_M_contig93.17378.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig93 543951..547158 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig93.17378.1 ID=prot_E-siliculosus-1a_M_contig93.17378.1|Name=mRNA_E-siliculosus-1a_M_contig93.17378.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=227bp
MCADRCVSPCSRSNSLRMTNKQSYEMIQAGVGAAALERGEEGSLIAGTEP
RRKGWVAPALAAAVGVALLLVCGLSAHAREDASAAGAAPMQASTDSVPSC
SLLSCTSSGCDWDGAPFLCLDGGSAGGCADSASTWTGGDGCTSFCDLSGC
ADTLENTGVDDLPRRCLECDETQCSTLAGHPSQACGSTVPFMCLSGAATW
GCANNELAWASTPSTTCGECCDVRGC*