prot_E-siliculosus-1a_M_contig93.17369.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig93.17369.1
Unique Nameprot_E-siliculosus-1a_M_contig93.17369.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length173
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: D8LST0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST0_ECTSI)

HSP 1 Score: 350 bits (897), Expect = 4.970e-122
Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 0
Query:    1 MATTLNRIINHKAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYSGPSHPHDDRLPTDSAQSLLEKSDRKLIDRRPADIRKYQDDNYIEWP 172
            MATTLNRIINHKAKWHLIDA GQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKK+YRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIY GPSHPHDDRLPTDSAQSLLEKSDRKLIDRRP DI+KYQDDNYIEWP
Sbjct:    1 MATTLNRIINHKAKWHLIDASGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKVYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYPGPSHPHDDRLPTDSAQSLLEKSDRKLIDRRPTDIKKYQDDNYIEWP 172          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: A0A835ZK23_9STRA (Ribosomal protein L13 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK23_9STRA)

HSP 1 Score: 189 bits (481), Expect = 5.420e-59
Identity = 84/124 (67.74%), Postives = 101/124 (81.45%), Query Frame = 0
Query:   10 NHKAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYSGPSHPHD 133
            +H+  WHL+DA+ QIVGRLA QIAP++ GKHKPT+ PN  CGD+VVV+NA  V+FTG KW  K+YRWHSG+PGGLKER    QL R+PEEILRRAVMGMLPKN LR RM+ +L IY GP+HPH+
Sbjct:   11 SHRPMWHLVDAKDQIVGRLATQIAPLLVGKHKPTYSPNVACGDIVVVINAADVQFTGKKWTDKVYRWHSGYPGGLKERTPKQQLERRPEEILRRAVMGMLPKNKLRSRMILQLKIYEGPAHPHE 134          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: A0A7S2R604_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R604_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.710e-53
Identity = 86/140 (61.43%), Postives = 103/140 (73.57%), Query Frame = 0
Query:    7 RIINHKAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYSGPSHPHDDRLPTDSAQSLLE 146
            RI    ++WHL+DAR Q+VGRLA QI  I+RGKHKPT+ PN D GD VVV+NA+ V  TG+KW++K YRWHSG+PGGLK R A D   RKPEEILR AV GMLPKN LRKR + +L IY+GP H  +  L    A+SLLE
Sbjct:   13 RIRGTASRWHLVDAREQVVGRLAVQIGGILRGKHKPTYLPNADIGDTVVVINASEVCLTGSKWRQKQYRWHSGYPGGLKARSARDMAARKPEEILRHAVAGMLPKNKLRKRCLARLRIYAGPKHEFEAELGA-GAKSLLE 151          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: B8BX67_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BX67_THAPS)

HSP 1 Score: 172 bits (436), Expect = 2.810e-52
Identity = 78/124 (62.90%), Postives = 98/124 (79.03%), Query Frame = 0
Query:   15 WHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKR-MVTKLLIYSGPSHPHDDRLP 137
            WHL+DA  Q VGRLA  IAPI++GKHKPT+ PN DCGD VV+VNA+ V  +GNKW  K+YRWH+G+PGGLKERPA D L RKPE ILR+A++GML +N+LR+  M  +L IY+G  HPH+ +LP
Sbjct:   12 WHLVDATSQTVGRLATTIAPILKGKHKPTYRPNGDCGDYVVIVNADKVHLSGNKWDDKIYRWHTGYPGGLKERPAKDMLERKPEFILRKAILGMLYRNNLRESYMEPRLKIYAGSEHPHEAQLP 135          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: A0A448Z8K8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8K8_9STRA)

HSP 1 Score: 173 bits (438), Expect = 4.930e-52
Identity = 80/131 (61.07%), Postives = 100/131 (76.34%), Query Frame = 0
Query:   15 WHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVT-KLLIYSGPSHPHDDRLPTDSAQSL 144
            WHL+DA+ Q VGRLA QI+ I++GKHKPTF PN D GD VVV+NA  V+F+G KW  KLYRWHSG+PGGLKER A D + RKPEEIL++AV+GML +N+LR + +  +L IYSGP HPH  +LP  +   L
Sbjct:   12 WHLVDAKNQTVGRLAGQISQILKGKHKPTFRPNKDMGDHVVVINAEKVQFSGKKWNDKLYRWHSGYPGGLKERSARDMMARKPEEILKKAVLGMLKRNNLRHQSIEPRLRIYSGPDHPHTAQLPPGTTTPL 142          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: F0WMW5_9STRA (50S ribosomal protein L13 putative n=2 Tax=Albugo TaxID=65356 RepID=F0WMW5_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.210e-51
Identity = 77/127 (60.63%), Postives = 97/127 (76.38%), Query Frame = 0
Query:   12 KAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYSGPSHPHDDRLPT 138
            K  WH++DA+GQIVGRLA+Q+API+ GKHKPT+ PN DCGD +VV+NA  + FTG+KW +KLYRWH+G PGGLKER A +   RKPEEILR+AV GMLPKN +RK  + KL I+    H   D++ T
Sbjct:   11 KVCWHVVDAKGQIVGRLASQLAPILCGKHKPTYAPNVDCGDHLVVINAKDLVFTGDKWNQKLYRWHTGHPGGLKERTAKEMFARKPEEILRKAVYGMLPKNKMRKLQIQKLKIFLDEEHDFQDKVGT 137          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: A0A3F2S0U4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S0U4_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.290e-51
Identity = 75/119 (63.03%), Postives = 92/119 (77.31%), Query Frame = 0
Query:   12 KAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYSGPSH 130
            K  WH++DA+GQ++GRLA+Q+API+RGKHKPT+ PN DCGD VVV+NA  +E TGNKW  KLYRWH+G PGGLK+R A D   RKPEE+LR+AV GMLPKN +R     KL I+ G  H
Sbjct:    9 KVVWHVVDAKGQVLGRLASQLAPILRGKHKPTYAPNVDCGDYVVVINAKDIELTGNKWNNKLYRWHTGHPGGLKQRTAKDLFERKPEEVLRKAVFGMLPKNRMRALQDKKLKIFLGDEH 127          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: A0A7S3Q0X2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0X2_9STRA)

HSP 1 Score: 171 bits (433), Expect = 2.130e-51
Identity = 75/124 (60.48%), Postives = 99/124 (79.84%), Query Frame = 0
Query:   15 WHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVT-KLLIYSGPSHPHDDRLP 137
            WH++DA  Q VGRLAA IAP+++GKHKPT+ PN DCGD VV+VNA  V FTG KW  KLYRWH+GFPGGLK+R A + L R+PE+IL++A++GM+ +N+LR + +  +L IYSGP+HPH  +LP
Sbjct:   12 WHIVDASTQTVGRLAANIAPLLKGKHKPTYRPNGDCGDYVVIVNAEKVNFTGKKWNDKLYRWHTGFPGGLKQRRAKEMLERQPEKILKKAILGMIHRNNLRHKYIEPRLKIYSGPNHPHTGQLP 135          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: A0A7S4HN68_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HN68_9STRA)

HSP 1 Score: 170 bits (431), Expect = 4.860e-51
Identity = 76/123 (61.79%), Postives = 97/123 (78.86%), Query Frame = 0
Query:   15 WHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVT-KLLIYSGPSHPHDDRL 136
            WHLIDA  Q VGRLAA +API+RGKHKPT+ PN DCGD VV+VNA  V F+GNKW+ KLYRWH+G+PGGLKERPAD  L RKPE +L++A++GM+ K +L+   +  +L +Y+GP HPH  +L
Sbjct:   12 WHLIDAADQTVGRLAATVAPILRGKHKPTYRPNADCGDFVVIVNAEKVHFSGNKWKDKLYRWHTGYPGGLKERPADMMLERKPESVLQKAILGMVHKGNLKHGYIEPRLKVYAGPYHPHKSQL 134          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: A0A7S2UNE7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNE7_9STRA)

HSP 1 Score: 170 bits (430), Expect = 8.840e-51
Identity = 73/124 (58.87%), Postives = 98/124 (79.03%), Query Frame = 0
Query:   15 WHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVT-KLLIYSGPSHPHDDRLP 137
            WHL+DA+ Q VGRLA Q+API++GKHKPT+ P+ DCGD+VV++NA  V F+G KW  KLYRWH+GFPGGLK+R A + L RKPE+IL++A++GML +  LR + +  +L IY+GP HPH  +LP
Sbjct:   20 WHLVDAQSQTVGRLATQLAPILKGKHKPTYKPHTDCGDIVVIINAEKVHFSGKKWNDKLYRWHTGFPGGLKQRTAKEMLQRKPEDILKKAILGMLSRTKLRHKYIEPRLKIYTGPIHPHSAQLP 143          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LST0_ECTSI4.970e-12297.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZK23_9STRA5.420e-5967.74Ribosomal protein L13 n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2R604_9STRA1.710e-5361.43Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B8BX67_THAPS2.810e-5262.90Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A448Z8K8_9STRA4.930e-5261.07Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
F0WMW5_9STRA1.210e-5160.6350S ribosomal protein L13 putative n=2 Tax=Albugo ... [more]
A0A3F2S0U4_9STRA1.290e-5163.03Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A7S3Q0X2_9STRA2.130e-5160.48Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4HN68_9STRA4.860e-5161.79Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2UNE7_9STRA8.840e-5158.87Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005822Ribosomal protein L13PFAMPF00572Ribosomal_L13coord: 14..136
e-value: 5.7E-53
score: 178.4
IPR005822Ribosomal protein L13PANTHERPTHR11545RIBOSOMAL PROTEIN L13coord: 4..146
IPR005822Ribosomal protein L13HAMAPMF_01366Ribosomal_L13coord: 15..146
score: 28.489
IPR005823Ribosomal protein L13, bacterial-typeTIGRFAMTIGR01066TIGR01066coord: 11..138
e-value: 2.0E-50
score: 168.3
IPR036899Ribosomal protein L13 superfamilyGENE3D3.90.1180.10coord: 1..168
e-value: 8.4E-58
score: 196.8
IPR036899Ribosomal protein L13 superfamilySUPERFAMILY52161Ribosomal protein L13coord: 2..135
NoneNo IPR availablePANTHERPTHR11545:SF239S RIBOSOMAL PROTEIN L13, MITOCHONDRIALcoord: 4..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig93contigE-siliculosus-1a_M_contig93:465292..467775 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig93.17369.1mRNA_E-siliculosus-1a_M_contig93.17369.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig93 464990..467907 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig93.17369.1 ID=prot_E-siliculosus-1a_M_contig93.17369.1|Name=mRNA_E-siliculosus-1a_M_contig93.17369.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=173bp
MATTLNRIINHKAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDC
GDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEI
LRRAVMGMLPKNSLRKRMVTKLLIYSGPSHPHDDRLPTDSAQSLLEKSDR
KLIDRRPADIRKYQDDNYIEWP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036899Ribosomal_L13_sf
IPR005823Ribosomal_L13_bac-type
IPR005822Ribosomal_L13