mRNA_E-siliculosus-1a_M_contig93.17369.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: D8LST0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST0_ECTSI) HSP 1 Score: 352 bits (902), Expect = 2.400e-120 Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 1
Query: 133 MATTLNRIINHKAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYSGPSHPHDDRLPTDSAQSLLEKSDRKLIDRRPADIRKYQDDNYIEWP 648
MATTLNRIINHKAKWHLIDA GQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKK+YRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIY GPSHPHDDRLPTDSAQSLLEKSDRKLIDRRP DI+KYQDDNYIEWP
Sbjct: 1 MATTLNRIINHKAKWHLIDASGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKVYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYPGPSHPHDDRLPTDSAQSLLEKSDRKLIDRRPTDIKKYQDDNYIEWP 172
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: A0A835ZK23_9STRA (Ribosomal protein L13 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK23_9STRA) HSP 1 Score: 189 bits (481), Expect = 7.550e-57 Identity = 84/124 (67.74%), Postives = 101/124 (81.45%), Query Frame = 1
Query: 160 NHKAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYSGPSHPHD 531
+H+ WHL+DA+ QIVGRLA QIAP++ GKHKPT+ PN CGD+VVV+NA V+FTG KW K+YRWHSG+PGGLKER QL R+PEEILRRAVMGMLPKN LR RM+ +L IY GP+HPH+
Sbjct: 11 SHRPMWHLVDAKDQIVGRLATQIAPLLVGKHKPTYSPNVACGDIVVVINAADVQFTGKKWTDKVYRWHSGYPGGLKERTPKQQLERRPEEILRRAVMGMLPKNKLRSRMILQLKIYEGPAHPHE 134
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: A0A7S2R604_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R604_9STRA) HSP 1 Score: 176 bits (445), Expect = 2.110e-51 Identity = 86/140 (61.43%), Postives = 103/140 (73.57%), Query Frame = 1
Query: 151 RIINHKAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYSGPSHPHDDRLPTDSAQSLLE 570
RI ++WHL+DAR Q+VGRLA QI I+RGKHKPT+ PN D GD VVV+NA+ V TG+KW++K YRWHSG+PGGLK R A D RKPEEILR AV GMLPKN LRKR + +L IY+GP H + L A+SLLE
Sbjct: 13 RIRGTASRWHLVDAREQVVGRLAVQIGGILRGKHKPTYLPNADIGDTVVVINASEVCLTGSKWRQKQYRWHSGYPGGLKARSARDMAARKPEEILRHAVAGMLPKNKLRKRCLARLRIYAGPKHEFEAELGA-GAKSLLE 151
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: B8BX67_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BX67_THAPS) HSP 1 Score: 172 bits (436), Expect = 3.350e-50 Identity = 78/124 (62.90%), Postives = 98/124 (79.03%), Query Frame = 1
Query: 175 WHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKR-MVTKLLIYSGPSHPHDDRLP 543
WHL+DA Q VGRLA IAPI++GKHKPT+ PN DCGD VV+VNA+ V +GNKW K+YRWH+G+PGGLKERPA D L RKPE ILR+A++GML +N+LR+ M +L IY+G HPH+ +LP
Sbjct: 12 WHLVDATSQTVGRLATTIAPILKGKHKPTYRPNGDCGDYVVIVNADKVHLSGNKWDDKIYRWHTGYPGGLKERPAKDMLERKPEFILRKAILGMLYRNNLRESYMEPRLKIYAGSEHPHEAQLP 135
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: A0A448Z8K8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8K8_9STRA) HSP 1 Score: 173 bits (438), Expect = 5.930e-50 Identity = 80/131 (61.07%), Postives = 100/131 (76.34%), Query Frame = 1
Query: 175 WHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVT-KLLIYSGPSHPHDDRLPTDSAQSL 564
WHL+DA+ Q VGRLA QI+ I++GKHKPTF PN D GD VVV+NA V+F+G KW KLYRWHSG+PGGLKER A D + RKPEEIL++AV+GML +N+LR + + +L IYSGP HPH +LP + L
Sbjct: 12 WHLVDAKNQTVGRLAGQISQILKGKHKPTFRPNKDMGDHVVVINAEKVQFSGKKWNDKLYRWHSGYPGGLKERSARDMMARKPEEILKKAVLGMLKRNNLRHQSIEPRLRIYSGPDHPHTAQLPPGTTTPL 142
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: F0WMW5_9STRA (50S ribosomal protein L13 putative n=2 Tax=Albugo TaxID=65356 RepID=F0WMW5_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.430e-49 Identity = 77/127 (60.63%), Postives = 97/127 (76.38%), Query Frame = 1
Query: 166 KAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYSGPSHPHDDRLPT 546
K WH++DA+GQIVGRLA+Q+API+ GKHKPT+ PN DCGD +VV+NA + FTG+KW +KLYRWH+G PGGLKER A + RKPEEILR+AV GMLPKN +RK + KL I+ H D++ T
Sbjct: 11 KVCWHVVDAKGQIVGRLASQLAPILCGKHKPTYAPNVDCGDHLVVINAKDLVFTGDKWNQKLYRWHTGHPGGLKERTAKEMFARKPEEILRKAVYGMLPKNKMRKLQIQKLKIFLDEEHDFQDKVGT 137
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: A0A3F2S0U4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S0U4_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.520e-49 Identity = 75/119 (63.03%), Postives = 92/119 (77.31%), Query Frame = 1
Query: 166 KAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYSGPSH 522
K WH++DA+GQ++GRLA+Q+API+RGKHKPT+ PN DCGD VVV+NA +E TGNKW KLYRWH+G PGGLK+R A D RKPEE+LR+AV GMLPKN +R KL I+ G H
Sbjct: 9 KVVWHVVDAKGQVLGRLASQLAPILRGKHKPTYAPNVDCGDYVVVINAKDIELTGNKWNNKLYRWHTGHPGGLKQRTAKDLFERKPEEVLRKAVFGMLPKNRMRALQDKKLKIFLGDEH 127
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: A0A7S3Q0X2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0X2_9STRA) HSP 1 Score: 171 bits (433), Expect = 2.520e-49 Identity = 75/124 (60.48%), Postives = 99/124 (79.84%), Query Frame = 1
Query: 175 WHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVT-KLLIYSGPSHPHDDRLP 543
WH++DA Q VGRLAA IAP+++GKHKPT+ PN DCGD VV+VNA V FTG KW KLYRWH+GFPGGLK+R A + L R+PE+IL++A++GM+ +N+LR + + +L IYSGP+HPH +LP
Sbjct: 12 WHIVDASTQTVGRLAANIAPLLKGKHKPTYRPNGDCGDYVVIVNAEKVNFTGKKWNDKLYRWHTGFPGGLKQRRAKEMLERQPEKILKKAILGMIHRNNLRHKYIEPRLKIYSGPNHPHTGQLP 135
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: A0A7S4HN68_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HN68_9STRA) HSP 1 Score: 170 bits (431), Expect = 5.690e-49 Identity = 76/123 (61.79%), Postives = 97/123 (78.86%), Query Frame = 1
Query: 175 WHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVT-KLLIYSGPSHPHDDRL 540
WHLIDA Q VGRLAA +API+RGKHKPT+ PN DCGD VV+VNA V F+GNKW+ KLYRWH+G+PGGLKERPAD L RKPE +L++A++GM+ K +L+ + +L +Y+GP HPH +L
Sbjct: 12 WHLIDAADQTVGRLAATVAPILRGKHKPTYRPNADCGDFVVIVNAEKVHFSGNKWKDKLYRWHTGYPGGLKERPADMMLERKPESVLQKAILGMVHKGNLKHGYIEPRLKVYAGPYHPHKSQL 134
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Match: A0A7S2UNE7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNE7_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.030e-48 Identity = 73/124 (58.87%), Postives = 98/124 (79.03%), Query Frame = 1
Query: 175 WHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKLYRWHSGFPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVT-KLLIYSGPSHPHDDRLP 543
WHL+DA+ Q VGRLA Q+API++GKHKPT+ P+ DCGD+VV++NA V F+G KW KLYRWH+GFPGGLK+R A + L RKPE+IL++A++GML + LR + + +L IY+GP HPH +LP
Sbjct: 20 WHLVDAQSQTVGRLATQLAPILKGKHKPTYKPHTDCGDIVVIINAEKVHFSGKKWNDKLYRWHTGFPGGLKQRTAKEMLQRKPEDILKKAILGMLSRTKLRHKYIEPRLKIYTGPIHPHSAQLP 143 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig93.17369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig93.17369.1 >prot_E-siliculosus-1a_M_contig93.17369.1 ID=prot_E-siliculosus-1a_M_contig93.17369.1|Name=mRNA_E-siliculosus-1a_M_contig93.17369.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=173bp MATTLNRIINHKAKWHLIDARGQIVGRLAAQIAPIIRGKHKPTFCPNDDCback to top mRNA from alignment at E-siliculosus-1a_M_contig93:464990..467907- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig93.17369.1 ID=mRNA_E-siliculosus-1a_M_contig93.17369.1|Name=mRNA_E-siliculosus-1a_M_contig93.17369.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2918bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:464990..467907- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig93:464990..467907- >mRNA_E-siliculosus-1a_M_contig93.17369.1 ID=mRNA_E-siliculosus-1a_M_contig93.17369.1|Name=mRNA_E-siliculosus-1a_M_contig93.17369.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1038bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:464990..467907- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |