prot_E-siliculosus-1a_M_contig93.17367.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig93.17367.1
Unique Nameprot_E-siliculosus-1a_M_contig93.17367.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length89
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig93.17367.1 vs. uniprot
Match: A0A6H5L128_9PHAE (COX assembly mitochondrial protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L128_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 1.410e-54
Identity = 83/88 (94.32%), Postives = 87/88 (98.86%), Query Frame = 0
Query:    1 MHPPLLRPHPSCHEEVKVLMACHEENPYGKFFGACNDLKIALDSCFVHEKEEKRRKNMAKARRFDAGFQKELELRRKELDQEQQQAGR 88
            MHPPLLRPHPSCHEEVK+LMACHEENPYGKFFGACNDLK+ALDSCFV EKEEKRRKN+AKARRFDAGFQKELELRRKEL+QEQQQAGR
Sbjct:    1 MHPPLLRPHPSCHEEVKMLMACHEENPYGKFFGACNDLKLALDSCFVLEKEEKRRKNLAKARRFDAGFQKELELRRKELEQEQQQAGR 88          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17367.1 vs. uniprot
Match: F0Y773_AURAN (COX assembly mitochondrial protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y773_AURAN)

HSP 1 Score: 96.3 bits (238), Expect = 2.410e-24
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 0
Query:    1 MHPPLLRPHPSCHEEVKVLMACHEENPYGKFFGACNDLKIALDSCFVHEKEEKRRKNMAKARRFDAGFQKELELR 75
            MHPPL RPHP C   V +L+ CH+ENPYGKF+GACND K A+D CF  EKEEKRR N  K R F+  ++K+ + R
Sbjct:    1 MHPPLYRPHPKCAALVDLLVKCHDENPYGKFWGACNDEKAAMDWCFKEEKEEKRRANFEKTRSFNEEWRKKQDAR 75          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17367.1 vs. uniprot
Match: A0A8J2WQW2_9STRA (COX assembly mitochondrial protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WQW2_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.150e-23
Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 0
Query:    1 MHPPLLRPHPSCHEEVKVLMACHEENPYGKFFGACNDLKIALDSCFVHEKEEKRRKNMAKARRFDA 66
            MHPPL RPHP C   V  L+ CH+ N YGKF+GACND K A+D+CF  EK+EKRR+N+ KAR FDA
Sbjct:    1 MHPPLYRPHPKCAALVDALVECHDANVYGKFWGACNDQKAAMDACFKAEKDEKRRENLRKARAFDA 66          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17367.1 vs. uniprot
Match: A0A3M6VJT8_9STRA (COX assembly mitochondrial protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJT8_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.710e-23
Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 0
Query:    1 MHPPLLRPHPSCHEEVKVLMACHEENPYGKFFGACNDLKIALDSCFVHEKEEKRRKNMAKARRFDAGFQKELELRR 76
            MH PL RPHP C  E+K L+ CH+ NPY KFFGAC+D+K ALD CF HEKE  R +N+ +A+  DA  +++++ RR
Sbjct:    1 MHTPLDRPHPDCQSEIKALLQCHDNNPYAKFFGACSDVKTALDWCFKHEKERIRAENLKRAKASDAFVKQKMQERR 76          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17367.1 vs. uniprot
Match: K3WST6_GLOUD (COX assembly mitochondrial protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WST6_GLOUD)

HSP 1 Score: 90.1 bits (222), Expect = 8.200e-22
Identity = 45/86 (52.33%), Postives = 57/86 (66.28%), Query Frame = 0
Query:    1 MHPPLLRPHPSCHEEVKVLMACHEENPYGKFFGACNDLKIALDSCFVHEKEEKRRKNMAKARRFDAGFQKELELRRKELDQEQQQA 86
            MH PL RPHP C E +  L  CHEENP  KFFGACN+ K+ALD CF  EKE KR +N+ +AR  DA  +++++ RR+   Q  Q A
Sbjct:    1 MHAPLDRPHPDCQEVIMALNLCHEENPRMKFFGACNEAKVALDKCFKKEKERKRDENLRRARASDAYVRQKMKERREREAQAAQDA 86          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17367.1 vs. uniprot
Match: G4ZUD5_PHYSP (COX assembly mitochondrial protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZUD5_PHYSP)

HSP 1 Score: 89.7 bits (221), Expect = 1.580e-21
Identity = 43/83 (51.81%), Postives = 55/83 (66.27%), Query Frame = 0
Query:    1 MHPPLLRPHPSCHEEVKVLMACHEENPYGKFFGACNDLKIALDSCFVHEKEEKRRKNMAKARRFDAGFQKELELRRKELDQEQ 83
            MH PL RPHP C  E+K L+ CHEENPY KFFGAC D+K ALD CF  EK   R +N  +A+  DA  +++++ RR  +  EQ
Sbjct:    1 MHTPLDRPHPDCQAEIKALLECHEENPYAKFFGACGDVKTALDWCFREEKVRIRSENFQRAKASDAYVRQKMQERRDRVAAEQ 83          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17367.1 vs. uniprot
Match: A0A6A3SY18_9STRA (COX assembly mitochondrial protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SY18_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 8.360e-21
Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = 0
Query:    1 MHPPLLRPHPSCHEEVKVLMACHEENPYGKFFGACNDLKIALDSCFVHEKEEKRRKNMAKARRFDAGFQKELELRRKELDQEQ 83
            MH PL RPHP C  E+K L+ CH+ENPY KFFGAC ++K ALD CF  EK   R +N   A+  DA  +++++ RR  + +EQ
Sbjct:    1 MHTPLDRPHPDCQAEIKALLECHDENPYAKFFGACGEVKTALDWCFRQEKTRIRSENFKHAKASDAFVRQKMQERRDRMAEEQ 83          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17367.1 vs. uniprot
Match: A0A0P1AB85_PLAHL (COX assembly mitochondrial protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AB85_PLAHL)

HSP 1 Score: 87.0 bits (214), Expect = 1.320e-20
Identity = 40/76 (52.63%), Postives = 52/76 (68.42%), Query Frame = 0
Query:    1 MHPPLLRPHPSCHEEVKVLMACHEENPYGKFFGACNDLKIALDSCFVHEKEEKRRKNMAKARRFDAGFQKELELRR 76
            MH PL RPHP C  E+K L+ CH +NPY KFFGACND+K ALD CF  EK   R +N+  A+  DA  +++++ RR
Sbjct:    1 MHAPLDRPHPDCQIEIKALLDCHNDNPYAKFFGACNDVKSALDQCFKKEKIRIRSENLRHAKASDAYVRRKMQERR 76          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17367.1 vs. uniprot
Match: A0A225VCF9_9STRA (COX assembly mitochondrial protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VCF9_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.390e-20
Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 0
Query:    1 MHPPLLRPHPSCHEEVKVLMACHEENPYGKFFGACNDLKIALDSCFVHEKEEKRRKNMAKARRFDAGFQKELELRRKELDQEQQQA 86
            MH PL RPHP C  E+K L+ CH+ENPY KFFGAC ++K ALD CF  EK   R +N   A+  DA  +++++ RR  +  E+ +A
Sbjct:    1 MHTPLDRPHPDCQTEIKALLECHDENPYAKFFGACGEIKTALDICFREEKNRIRSENFKHAKASDAYVKQKMQERRDRVANEKAKA 86          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17367.1 vs. uniprot
Match: A0A2P4XXV8_9STRA (COX assembly mitochondrial protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XXV8_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.320e-20
Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 0
Query:    1 MHPPLLRPHPSCHEEVKVLMACHEENPYGKFFGACNDLKIALDSCFVHEKEEKRRKNMAKARRFDAGFQKELELRR 76
            MH PL RPHP C  E+K L+ CHE NPY KFFGAC D+K ALD CF  EK   R +N   A+  DA  +++++ RR
Sbjct:    1 MHTPLDRPHPDCQTEIKALLECHESNPYAKFFGACGDVKTALDICFREEKNRIRSENFKHAKASDAYVKQKMQERR 76          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig93.17367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L128_9PHAE1.410e-5494.32COX assembly mitochondrial protein n=1 Tax=Ectocar... [more]
F0Y773_AURAN2.410e-2458.67COX assembly mitochondrial protein n=1 Tax=Aureoco... [more]
A0A8J2WQW2_9STRA2.150e-2363.64COX assembly mitochondrial protein n=1 Tax=Pelagom... [more]
A0A3M6VJT8_9STRA4.710e-2353.95COX assembly mitochondrial protein n=1 Tax=Peronos... [more]
K3WST6_GLOUD8.200e-2252.33COX assembly mitochondrial protein n=1 Tax=Globisp... [more]
G4ZUD5_PHYSP1.580e-2151.81COX assembly mitochondrial protein n=1 Tax=Phytoph... [more]
A0A6A3SY18_9STRA8.360e-2149.40COX assembly mitochondrial protein n=2 Tax=Phytoph... [more]
A0A0P1AB85_PLAHL1.320e-2052.63COX assembly mitochondrial protein n=1 Tax=Plasmop... [more]
A0A225VCF9_9STRA1.390e-2047.67COX assembly mitochondrial protein n=1 Tax=Phytoph... [more]
A0A2P4XXV8_9STRA2.320e-2052.63COX assembly mitochondrial protein n=1 Tax=Phytoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013892Cytochrome c oxidase biogenesis protein Cmc1-likePFAMPF08583Cmc1coord: 9..64
e-value: 6.3E-13
score: 48.5
IPR013892Cytochrome c oxidase biogenesis protein Cmc1-likePANTHERPTHR22977COX ASSEMBLY MITOCHONDRIAL PROTEINcoord: 1..84
NoneNo IPR availablePANTHERPTHR22977:SF1COX ASSEMBLY MITOCHONDRIAL PROTEIN 2 HOMOLOGcoord: 1..84
NoneNo IPR availablePROSITEPS51808CHCHcoord: 9..53
score: 11.598

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig93contigE-siliculosus-1a_M_contig93:461628..463711 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig93.17367.1mRNA_E-siliculosus-1a_M_contig93.17367.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig93 461611..463847 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig93.17367.1 ID=prot_E-siliculosus-1a_M_contig93.17367.1|Name=mRNA_E-siliculosus-1a_M_contig93.17367.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=89bp
MHPPLLRPHPSCHEEVKVLMACHEENPYGKFFGACNDLKIALDSCFVHEK
EEKRRKNMAKARRFDAGFQKELELRRKELDQEQQQAGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013892Cyt_c_biogenesis_Cmc1-like