prot_E-siliculosus-1a_M_contig93.17324.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig93.17324.1
Unique Nameprot_E-siliculosus-1a_M_contig93.17324.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length192
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig93.17324.1 vs. uniprot
Match: D7G907_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G907_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 6.850e-95
Identity = 187/191 (97.91%), Postives = 188/191 (98.43%), Query Frame = 0 
Query:    1 MRISLLQLCLGFLAVCLVLGEQVEEAPSSNLFKKFFTKTKNGLGKVRKSLAVKKDKAVDEEDPLGEGVEAVLDAIDEFVAEGEKNTGKAAEDVKKVVDETKESVKSAISASKDKLNEAGADIKSTVDAAVEGAAADMEAVRGSLQDGIKNVGDQVTEAARXXXXXXXXXXXXXXXXXXXXXXXASTAAGEL 191
            MRISLLQLC GFLAVCLVLGEQVEEAPSSNLFKKFFTKTKNGLGKVRKSLAVKKDKAVDEEDPLGEGVEAVLDAIDEFVAEGEKNTGKAAEDVKKVVDETKESVKSAISASKDKLNEAGADIKSTVDAAVEGAAADM+AVRGSLQDGIKNVGDQV EAA XXXXXXXXXXXXXXXXXXXXXXXASTAAGEL
Sbjct:    1 MRISLLQLCFGFLAVCLVLGEQVEEAPSSNLFKKFFTKTKNGLGKVRKSLAVKKDKAVDEEDPLGEGVEAVLDAIDEFVAEGEKNTGKAAEDVKKVVDETKESVKSAISASKDKLNEAGADIKSTVDAAVEGAAADMDAVRGSLQDGIKNVGDQVAEAAXXXXXXXXXXXXXXXXXXXXXXXXASTAAGEL 191
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig93.17324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G907_ECTSI6.850e-9597.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 160..183
NoneNo IPR availableGENE3D1.20.120.20coord: 37..191
e-value: 1.2E-6
score: 30.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..191
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.904
NoneNo IPR availableSUPERFAMILY58113Apolipoprotein A-Icoord: 72..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig93contigE-siliculosus-1a_M_contig93:12447..14773 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig93.17324.1mRNA_E-siliculosus-1a_M_contig93.17324.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig93 11297..14773 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig93.17324.1 ID=prot_E-siliculosus-1a_M_contig93.17324.1|Name=mRNA_E-siliculosus-1a_M_contig93.17324.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=192bp
MRISLLQLCLGFLAVCLVLGEQVEEAPSSNLFKKFFTKTKNGLGKVRKSL
AVKKDKAVDEEDPLGEGVEAVLDAIDEFVAEGEKNTGKAAEDVKKVVDET
KESVKSAISASKDKLNEAGADIKSTVDAAVEGAAADMEAVRGSLQDGIKN
VGDQVTEAAREAAESAAAASKQAQEDAEETAEKASTAAGEL*
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