mRNA_E-siliculosus-1a_F_contig105.353.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig105.353.1
Unique Name	mRNA_E-siliculosus-1a_F_contig105.353.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: A0A6H5KSI2_9PHAE (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI2_9PHAE)

HSP 1 Score: 967 bits (2499), Expect = 0.000e+0
Identity = 503/599 (83.97%), Postives = 506/599 (84.47%), Query Frame = 3

Query:    3 IVDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT------------------------------IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 1529
            I+DHEYDAVVV AGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED     MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT                              IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEF+QFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER                                                       ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKD DGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPK+QTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVV DFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY
Sbjct:   52 IIDHEYDAVVVRAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFATDLLMTPDGECVGVIAVCMEDGSIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFIQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRSMTIEIKEGRGVGPNADHIHLHLDHLPAELLAERLPGISETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDGDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKAQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVKDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 650

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: D8LSF2_ECTSI (SDH1, succinate dehydrogenase subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF2_ECTSI)

HSP 1 Score: 900 bits (2326), Expect = 0.000e+0
Identity = 445/448 (99.33%), Postives = 447/448 (99.78%), Query Frame = 3

Query:  186 MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 1529
            MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKD DGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVV+DF+DVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY
Sbjct:   93 MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDGDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVNDFSDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 540

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: A0A7S3ZYC3_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=3 Tax=cellular organisms TaxID=131567 RepID=A0A7S3ZYC3_9STRA)

HSP 1 Score: 819 bits (2116), Expect = 3.080e-288
Identity = 425/599 (70.95%), Postives = 456/599 (76.13%), Query Frame = 3

Query:    3 IVDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT------------------------------IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 1529
            IVDH YD VVVGAGGAGLRAAMG AEAG KTAC+TKLFPTRSHTVAAQGGINAALGNMTED     MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTE+GKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT                              IHR +AKNTVLATGGYGRA+FSCTSAHTCTGDG AMA+RAG+  EDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNS+GERFMER                                                       ETA IF+GVDVT++PIPVLPTVHYNMGGIPTNHLGEVI  KKD+ GNV DHDA+VPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIA+I+KPGD V   P+   +K+L  LD  R + G TP A++R  +QK MQDHAAVYRTQESLAEGVT++D VV  F DV V+DRSLIWNTDL+E +EL NLL NAA TMHAAEARKESRGAHARED PDRLDD WMKH+MTY+D  T KT V YRP+H  TLDE+E  +VPP  RVY
Sbjct:   55 IVDHSYDVVVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEDGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYFLEFFALDLIMDDEGKCVGVVCLEMENGTIHRINAKNTVLATGGYGRAYFSCTSAHTCTGDGNAMALRAGLAAEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSDGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGKEKDHCYLHLDHLPAELLAERLPGISETAAIFAGVDVTREPIPVLPTVHYNMGGIPTNHLGEVIHQKKDASGNVVDHDAVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIADIAKPGDAVPPLPRDAGQKTLQDLDDVRHSSGPTPTAEIRRDMQKTMQDHAAVYRTQESLAEGVTKIDKVVDSFQDVGVSDRSLIWNTDLVETLELRNLLPNAAATMHAAEARKESRGAHAREDCPDRLDDDWMKHTMTYYDEATRKTSVTYRPIHYETLDEDECAVVPPVARVY 653

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: A0A835YUP3_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUP3_9STRA)

HSP 1 Score: 813 bits (2101), Expect = 1.560e-286
Identity = 423/598 (70.74%), Postives = 465/598 (77.76%), Query Frame = 3

Query:    6 VDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT------------------------------IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 1529
            +DHEYDAVVVGAGGAGLRAAMG AEAG KTACITKLFPTRSHTVAAQGGINAALGNMT D     MYDTVKGSDWLGDQDAIHYMC+EAPRAVLELE YGLPFSRTE+GKIYQRAFGGQSL++GKGGQAYRCA AADRTGHAMLHTLYGRSLAF+T+                              IHRF AKNTVLATGGYGRA+FSCTSAHTCTGDG AMA+RAG+PL+DPEFVQFHPTGIYGAGCLITEG RGEGG+LRNSEGERFMER                                                       E A IFSGVDVTK+PIPVLPTVHYNMGGIPTNH GEV++P+K+++G++ D DAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIA+I+KPGDKV +APK++T+++L ALD  R+A G T  A+LRLKLQ+ MQD+AAVYRTQE+LA GV  VD VV +F DV VTDRSLIWNTDLIE MEL NLL NAACTMHAAEARKESRGAHAREDF DR D  WMKH++  FD   GKT ++YRPVH+FTLDE+E K+VPPFKRVY
Sbjct:   21 LDHEYDAVVVGAGGAGLRAAMGLAEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTPDDWRWHMYDTVKGSDWLGDQDAIHYMCKEAPRAVLELEQYGLPFSRTEDGKIYQRAFGGQSLEFGKGGQAYRCAAAADRTGHAMLHTLYGRSLAFNTSYFIEYFAMDLLMADDGSCVGVTAMCMEDGSIHRFKAKNTVLATGGYGRAYFSCTSAHTCTGDGSAMALRAGLPLQDPEFVQFHPTGIYGAGCLITEGSRGEGGMLRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGPNKDHIHLHLDHLPAELLAERLPGISELAAIFSGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVVKPRKNANGDI-DQDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIADIAKPGDKVQDAPKAETDRALGALDDMRYARGQTSTAELRLKLQRVMQDNAAVYRTQETLAHGVVSVDAVVKEFGDVGVTDRSLIWNTDLIETMELRNLLGNAACTMHAAEARKESRGAHAREDFKDRDDVNWMKHTLATFDESKGKTHLDYRPVHAFTLDEKECKVVPPFKRVY 617

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: W7TSA7_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSA7_9STRA)

HSP 1 Score: 794 bits (2050), Expect = 2.460e-278
Identity = 413/599 (68.95%), Postives = 454/599 (75.79%), Query Frame = 3

Query:    3 IVDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT------------------------------IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 1529
            ++DHEYD VVVGAGGAGLRAAMG AEAG KTAC+TKLFPTRSHTVAAQGGINAALGNMTED     MYDTVKGSDWLGDQDAIHYMCREAPRAV ELESYGLPFSRTE+GKIYQRAFGGQSL YGKGGQAYRCACAADRTGHAMLHTLYGRSLAF+TT                              +HR  A NTVLATGGYGRA+FSCTSAHTCTGDG AM +RAG+P+EDPEFVQFHPTGIYGAGCLITEGCRGEGGILRN+EGERFMER                                                       ETA IF+GVDVTK+PIPVLPTVHYNMGGIPTNH GEVI PKK +DG++ D D ++PGLFAAGEAACASVHGANRLGANSLLDIVVFGRA ALRIA+I+KPGDKV   P    ++S+  LDK RFA G+T  A +R K+QK MQ+HAAVYRTQ+SLAEG  ++D V+S + D+KVTDRSL+WNTDLIE++EL NLLSNAA TM+AAEARKESRGAHAREDF +R D  WM H++  FDYDT KT + YRPVH  TLDE EVK VPPFKRVY
Sbjct:   50 VIDHEYDVVVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKADGSL-DPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY 647

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: A0A6U4KQK6_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KQK6_9STRA)

HSP 1 Score: 784 bits (2025), Expect = 1.050e-274
Identity = 409/599 (68.28%), Postives = 449/599 (74.96%), Query Frame = 3

Query:    3 IVDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDT------------------------------TIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 1529
            IVDHE+DAVVVGAGGAGLRAAMG +E G KTAC+TKLFPTRSHTVAAQGGINAALGNMTED     MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSL++GKGGQAYRCACAADRTGHAMLHTLYGRSLAFDT                              T+HRF+AKNTVLATGGYGRA+FSCTSAHTCTGDG AMA+RAGIP +DPEFVQFHPTGIYGAGCL+TEGCRGEGGILRNSEGERFMER                                                       ETA IF+GVDVTK+PIPVLPTVHYNMGG+PTNH GEV++P KD      + DA+VPGLFAAGE A ASVHGANRLGANSLLDIVVFGRACA RIA+I+KPG+ V   P    EK++  LDK RFADGA P AD+RL +Q  MQ+HAAVYRT + L EGV ++D VV  F DVKV+D SL+WNTDLIE  EL NLL NAA T+H+AEARKESRGAHA E+FPDR D+ WMKH+++Y D D+GKT V+YRPVH FTLDE E K VPP  RVY
Sbjct:   45 IVDHEFDAVVVGAGGAGLRAAMGLSEHGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLEFGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTAYFIEYFALDLIMDGDGKCVGIMAINMEDGTLHRFNAKNTVLATGGYGRAYFSCTSAHTCTGDGNAMALRAGIPNQDPEFVQFHPTGIYGAGCLMTEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGPKSDHIYLHLDHLPADLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGVPTNHFGEVLKPTKD------EPDAVVPGLFAAGEVASASVHGANRLGANSLLDIVVFGRACANRIADIAKPGEAVPPLPTKAGEKTIDDLDKVRFADGAIPTADIRLDMQMTMQEHAAVYRTADVLKEGVVKMDEVVKKFKDVKVSDHSLVWNTDLIETWELRNLLPNAATTVHSAEARKESRGAHAHENFPDRDDENWMKHTLSYHDEDSGKTTVDYRPVHYFTLDEAECKTVPPVARVY 637

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: A0A7S2Y3D2_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3D2_9STRA)

HSP 1 Score: 777 bits (2007), Expect = 7.160e-272
Identity = 409/600 (68.17%), Postives = 452/600 (75.33%), Query Frame = 3

Query:    3 IVDH-EYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT-----------------------------IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVS-DFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 1529
            IVDH E+DAVVVGAGGAGLRAAMG AEAG  TAC+TKLFPTRSHTVAAQGGINAALGNMT+D     MYDTVKGSDWLGDQDAIHYMC+EAP AVLELESYGLPFSRTEEGKIYQRAFGGQSL+YGKGGQA+RCACAADRTGHAMLHTLYGRSLAFDTT                             IHRF   NTVLATGG GRA+FSCTSAHTCTGDGGAMA RAG+PLED EFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER                                                       ETA IF+GVDVTKDPIPVLPTVHYNMGGIPTNHLGEVI PKK ++G V D DAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIA+I+KPGDK    P    ++S+A +DK R+A+G+T  ADLRL+LQK MQ HAAVYRT + L +G+  VD +     +DV+  D+ L+WNT+LIE +EL NL++NA+  + +AE RKESRGAHAREDFPDR D+ WMKH++ YFD  TGK+K+EYRPVHSFTLDE+E K VPP +RVY
Sbjct:   45 IVDHTEFDAVVVGAGGAGLRAAMGLAEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMTKDDWRWHMYDTVKGSDWLGDQDAIHYMCKEAPHAVLELESYGLPFSRTEEGKIYQRAFGGQSLEYGKGGQAFRCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFALDLMMSEGQCVGITAMCMEDGSIHRFHTNNTVLATGGAGRAYFSCTSAHTCTGDGGAMATRAGLPLEDQEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTVEIQEGRGVGKNKDHIFLHLDHLPPDLLAERLPGISETASIFAGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVINPKKAANGEVEDWDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIADIAKPGDKKPPLPGDAGDQSIADVDKFRYANGSTSTADLRLELQKSMQTHAAVYRTPDLLKKGLDEVDAIAKRSVDDVRNDDKGLVWNTNLIETLELRNLVANASTVITSAENRKESRGAHAREDFPDRDDEHWMKHTLAYFDEATGKSKLEYRPVHSFTLDEDECKTVPPVQRVY 644

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: F0YDU4_AURAN (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDU4_AURAN)

HSP 1 Score: 776 bits (2003), Expect = 1.680e-271
Identity = 407/599 (67.95%), Postives = 440/599 (73.46%), Query Frame = 3

Query:    3 IVDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT------------------------------IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 1529
            +VDH YD  VVGAGGAGLRAAMG AEAG KTAC+TKLFPTRSHTVAAQGGINAALGNM+ED     MYDTVKGSDWLGDQDAIHYMCREAP+AVLELES+GLPFSRT++GKIYQRAFGGQSLDYGKGGQAYRC  AADRTGHAMLHTLYGRSLAFDTT                              +HR +A NTVLATGGYGRA+FSCTSAHTCTGDG AMA+RAG+  EDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER                                                       ETA IF+GVDVTK+PIPVLPTVHYNMGGIPTNHLGEVIR     DG+V DHD +VPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIA+I++PG  V   P    EK++A +D  RF+ G  P AD+R  +QK MQDHAAVYRT ESLAEG  ++   V  F D+ VTDRSLIWNTDLIE +EL NLL NAA TM AAEARKESRGAHARED PDRLDD WMKH+M YFD  T KT V YRP+H  TLD +E  +VPP  RVY
Sbjct:   31 VVDHSYDVCVVGAGGAGLRAAMGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMSEDDWKWHMYDTVKGSDWLGDQDAIHYMCREAPQAVLELESFGLPFSRTDDGKIYQRAFGGQSLDYGKGGQAYRCCAAADRTGHAMLHTLYGRSLAFDTTYFLEYFALDLIMDDEGSCVGIVAINMEDGTLHRINASNTVLATGGYGRAYFSCTSAHTCTGDGNAMALRAGLAAEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGKDADHCYLHLDHLPAELLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHLGEVIRQVTGPDGSVIDHDEVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIADIAEPGAPVPPLPADAAEKTIADVDAIRFSSGPRPTADVRKDMQKTMQDHAAVYRTAESLAEGCEKIQKNVEAFADIGVTDRSLIWNTDLIETIELRNLLPNAATTMFAAEARKESRGAHAREDTPDRLDDEWMKHTMCYFDEATNKTTVTYRPIHYETLDADECPVVPPVARVY 629

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: A0A7S2RM10_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RM10_9STRA)

HSP 1 Score: 770 bits (1988), Expect = 4.660e-269
Identity = 404/599 (67.45%), Postives = 442/599 (73.79%), Query Frame = 3

Query:    3 IVDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT------------------------------IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 1529
            +VDH++D VVVGAGGAGLRAAMG AEAG KTACITKLFPTRSHTVAAQGGINAALGNMTED     MYDTVKGSDWLGDQDAIHYMCREAP+AVLELES+G+PFSRTEEGKIYQRAFGGQSLD+GKGGQAYRCA AADRTGHAMLHTLYGRSLAFDTT                              +HR +A NT+LATGGYGRA+FSCTSAHTCTGDG AMA+RAG+  EDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER                                                       ETA IF+ VDVTK+PIPVLPTVHYNMGG+PTNH GEVIR KK++DG   DHD+IVPGLFAAGE ACASVHGANRLGANSLLDIVVFGRACA RIAEI+KPG  V   PK   + S+A LDK R+A G  P A LRL++Q+ MQ++AAVYRT E L+EG  ++D VV  F  V  +DRSLIWNTDLIE +EL NLL NA+ TMHAA  R ESRGAHARED PDR D+ WMKH+M YFD  TG++ VEYRPVH  TLDE E K VPP  RVY
Sbjct:   43 VVDHQFDVVVVGAGGAGLRAAMGAAEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPKAVLELESFGMPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGRSLAFDTTYLIEYFALDLIMDDEGRCVGVLAMCMEDGSLHRINASNTILATGGYGRAYFSCTSAHTCTGDGNAMAMRAGLANEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGKNNDHIFLHLDHLPADLLAERLPGISETANIFAAVDVTKEPIPVLPTVHYNMGGVPTNHFGEVIRVKKNADGT-EDHDSIVPGLFAAGEVACASVHGANRLGANSLLDIVVFGRACANRIAEIAKPGAPVPPLPKDAGDASIADLDKLRYAKGDVPTASLRLEMQQVMQENAAVYRTAEVLSEGCEKIDAVVDKFQHVGTSDRSLIWNTDLIETLELRNLLGNASTTMHAASQRTESRGAHAREDTPDRDDENWMKHTMAYFDESTGRSTVEYRPVHYHTLDEGECKTVPPVARVY 640

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: A0A7S3JSD7_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSD7_9STRA)

HSP 1 Score: 765 bits (1975), Expect = 3.360e-267
Identity = 399/600 (66.50%), Postives = 445/600 (74.17%), Query Frame = 3

Query:    3 IVDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT------------------------------IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKD-SDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 1529
            I+DH++D  VVGAGGAGLRAAMG AEAG KT C+TKLFPTRSHTVAAQGGINAALGNMT+D      YDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQA+RCACAADRTGHAMLHTLYGRSLAFDTT                              +HR  A NTVLATGGYGRA+FSCTSAHTCTGDG AMA+RAG+  +DPEFVQFHPTGIYGAGCLITEGCRGEGGILRN++GERFMER                                                       ETAQIF+GVDVTK+PIPVLPTVHYNMGGIPTN+ GEVIR  KD + G + DHDA+VPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIA+I++PG +    PK+  EKS+A L++ RFA G TP A +R  +QK MQDHAAVYRTQESLA+G  ++D V + F DV + DRSLIWNTDL+E +EL NLL NAA T+HAAE RKESRGAHAREDF  R D  WMKH++ Y D ++ + +V+YRP+H +TLDE E   VPP  RVY
Sbjct:   34 IIDHDFDVCVVGAGGAGLRAAMGSAEAGFKTVCVTKLFPTRSHTVAAQGGINAALGNMTKDDWRWHSYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAFRCACAADRTGHAMLHTLYGRSLAFDTTYLIEYFALDLIMDDDGACVGVLALCMEDGSLHRIHAANTVLATGGYGRAYFSCTSAHTCTGDGNAMALRAGLAAQDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAQGERFMERYAPSAKDLASRDVVSRAMTLEIQQGRGVGKDKDHIFLHLDHLPPELLAERLPGISETAQIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVIRQIKDEATGEIIDHDAVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAQIAQPGGQKKPLPKNAGEKSIADLNQIRFAQGPTPTAHIRHSMQKVMQDHAAVYRTQESLAQGAQKIDQVCAAFADVGIKDRSLIWNTDLVETLELRNLLPNAATTVHAAEKRKESRGAHAREDFTTRDDQNWMKHTVCYVDPESFQVQVDYRPIHYYTLDENEFATVPPVARVY 633

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KSI2_9PHAE	0.000e+0	83.97	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
D8LSF2_ECTSI	0.000e+0	99.33	SDH1, succinate dehydrogenase subunit 1 n=1 Tax=Ec...	[more]
A0A7S3ZYC3_9STRA	3.080e-288	70.95	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
A0A835YUP3_9STRA	1.560e-286	70.74	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
W7TSA7_9STRA	2.460e-278	68.95	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
A0A6U4KQK6_9STRA	1.050e-274	68.28	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
A0A7S2Y3D2_9STRA	7.160e-272	68.17	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
F0YDU4_AURAN	1.680e-271	67.95	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
A0A7S2RM10_9STRA	4.660e-269	67.45	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
A0A7S3JSD7_9STRA	3.360e-267	66.50	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig105	contig	E-siliculosus-1a_F_contig105:105..11810 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	1467
Model size	2644
Exons	11
Ec32 ortholog	Ec-21_003470.2
Ec32 ortholog description	SDH1, succinate dehydrogenase subunit 1
Hectar predicted targeting category	other localisation
BRITE	ko00000,ko00001,ko00002,ko01000
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	C
EC	1.3.5.1
Ec32 ortholog	Ec-21_003470.1
EggNOG OGs	COG1053@1,KOG2403@2759
EggNOG free text desc.	anaerobic respiration
GOs	GO:0000104,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005749,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006119,GO:0006121,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008177,GO:0009055,GO:0009060,GO:0009061,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009314,GO:0009416,GO:0009453,GO:0009605,GO:0009628,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016627,GO:0016635,GO:0016999,GO:0017144,GO:0019637,GO:0019693,GO:0019752,GO:0019866,GO:0022900,GO:0022904,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0034641,GO:0040011,GO:0042330,GO:0042331,GO:0042773,GO:0042775,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045257,GO:0045273,GO:0045281,GO:0045283,GO:0045333,GO:0046034,GO:0046483,GO:0046956,GO:0050896,GO:0052128,GO:0055086,GO:0055114,GO:0070469,GO:0071704,GO:0072350,GO:0072521,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204
KEGG Module	M00009,M00011,M00148
KEGG Pathway	ko00020,ko00190,ko01100,ko01110,ko01120,ko01130,ko01200,ko04714,ko04932,ko05010,ko05012,ko05016,map00020,map00190,map01100,map01110,map01120,map01130,map01200,map04714,map04932,map05010,map05012,map05016
KEGG Reaction	R02164
KEGG ko	ko:K00234
KEGG rclass	RC00045
Preferred name	SDH1
Seed eggNOG ortholog	2880.D8LSF2
Seed ortholog evalue	7.7e-261
Seed ortholog score	906.0
Taxonomic scope	Eukaryota

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927550.798683-UTR-E-siliculosus-1a_F_contig105:104..169	1622927550.798683-UTR-E-siliculosus-1a_F_contig105:104..169	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig105 105..169 +
1696318581.3185-UTR-E-siliculosus-1a_F_contig105:104..169	1696318581.3185-UTR-E-siliculosus-1a_F_contig105:104..169	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig105 105..169 +
1622927550.937044-UTR-E-siliculosus-1a_F_contig105:10698..11810	1622927550.937044-UTR-E-siliculosus-1a_F_contig105:10698..11810	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig105 10699..11810 +
1696318581.4260957-UTR-E-siliculosus-1a_F_contig105:10698..11810	1696318581.4260957-UTR-E-siliculosus-1a_F_contig105:10698..11810	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig105 10699..11810 +

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig105.353.1	prot_E-siliculosus-1a_F_contig105.353.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig105 170..10698 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig105:105..11810+
coding sequence from alignment at E-siliculosus-1a_F_contig105:105..11810+

protein sequence of mRNA_E-siliculosus-1a_F_contig105.353.1

>prot_E-siliculosus-1a_F_contig105.353.1 ID=prot_E-siliculosus-1a_F_contig105.353.1|Name=mRNA_E-siliculosus-1a_F_contig105.353.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=489bp
MGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTEDMYDTVKGSDW
LGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGK
GGQAYRCACAADRTGHAMLHTLYGRSLAFDTTIHRFSAKNTVLATGGYGR
AFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGC
RGEGGILRNSEGERFMERETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTN
HLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLD
IVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVA
DLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWN
TDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHS
MTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY*

mRNA from alignment at E-siliculosus-1a_F_contig105:105..11810+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig105.353.1 ID=mRNA_E-siliculosus-1a_F_contig105.353.1|Name=mRNA_E-siliculosus-1a_F_contig105.353.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11706bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig105:105..11810+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AAATAGTCGACCACGAGTACGACGCGGTCGTCGTCGGGGCCGGGGGAGCT
GGTCTCCGCGCCGCGATGGGGTGTGCCGAGGCGGGCCTAAAGACGGCCTG
CATCACCAAGCTCTTCCCGACGAGGTCGCACACGGTGGCGGCGCAGGGGG
GGATCAACGCGGCCCTGGGGAACATGACCGAGGACGACTGGCGGTGGGAC
ATTGGTCATTGCGTTGCCGTTACCGGTGCCTGCGGTGGTGTTGGCAAGGG
GGGGGGGGGGGGGGGGGGGGGGGGTGGGTGGGGTGTCGGTGTGCGGGGGG
GTGGTGGGGGGGGGGGGGGTTGGCGGGGGGGGGGGGGGGGGGTGACGAGT
GTGTGTTGGTGTCTCGGTCTTCGTGGGTCTTGTTGGTGGTGGTGGTGTTG
GCACAGGTGTGTGTGTGTGTGTGTTGATGTCTCGGTCTTTGCTGTTGCCT
ATCGTTGCTGCTGCTTTTCCTGTTGTGTTGTGTGGCCGTCGTCGGCATTG
GCGGCGGGTCGGTCGGAGGTCGCAAATCGAGTCGAGAGATTCGAGTAGCG
GGGGCAAGGAAGGAATGCCGCAGCTTCGGACGGAGGGTCAACGATACCGC
CCAGTTCAAAACGTTTTCTGCTTCCACCAATTGTTCACCCATAGGTGGCG
GCTGTGTTGCTTGGATGCCAGCGTTCCGACTGACACCGCTCGGTGGTGAA
AAGGATTTTGTGTTCGACATTTTTTTCTGTTCATGTGTGAGACTTGTTGC
TCTCTTTCTAGACCCTGTTTCTCGTTAGGATGCTGCTTGATCCACGCTCT
GCATTCTTCTGTTTTAAAGGATTACAAGCCTGTGACCACACCTATCTGCC
TCTTGCGATGATGAACGTGTATAGGAAGAAGAATTCCGAAGGCGAGAACG
TTCAATTTTCAACACGAACAGCAACAACCAGTAGCACCAGCTCAATTAGA
CGTATCAGACGTCATCTCGTCCACCTGGCGGGAACATTAGAGATCGCGTC
TATGCAACCCCGTTCTCTCCCCTTCTTGTGTTCTAGCCCCCAACACCAAC
TTGCTTCCTTCGTCTGGTCCCCCGCCGTATCCAAAACAGGTGGCACATGT
ACGACACCGTCAAGGGGTCCGACTGGCTCGGAGACCAGGACGCGATCCAC
TACATGTGCCGAGAGGCGCCGCGGGCGGTGCTGGAGCTGGAGTCGTACGG
GTTGCCGTTCTCTCGTACAGAGGAAGGGAAGATCTACCAGCGGTGCGTGC
GTGCGTGCTTGGGTTAGTGGTTGTGCAAGGTCGCAACCTCGTGTGTGCGT
GTGTGTGTGTGCTTTTTTGGGCTAGCATCGACCGCGCTGACAGGCTGACC
TATGACAAGAGACGTCCGTTTCGTAGCACGATTATTGAAAGATGCGCACT
GCTTTCTAGTCGGTGTGTCTGTCTGTGTTGAACCATCATCGACCGCGCTA
GCCGGCTTACCGATGAAAAGATGTCAGTCTTATAGCGGGGCATGGGTGTC
TGCCGCAACAAGGCCGAACGGCTACAGCGCACACAGCGGCGGCGGCGCGC
GCAGGCTACACGCACCAGAACAGAAAACAACCAAAACATGGTCACCTGCT
CCCGCATCATGGCGGTTAAAGTCGGAGCCATAAAAAATTATTTCAGGGCA
ACCTTGGGCTGTGTATGTTTTATCATTTTTTTTTGCCGTGGCCGCCGTGG
CTGTACCTGCAGACCCTGCGTTATCGGCTGCTCCAATGAAGAGCCACCAT
TGTTTTCGAGGGCCATTGATCCAGGAGGCCGGGGCCCTCTCCGACCCTCA
CCCGCATTGTCTACCTACGCGCCTTGCACACAATCTTTTATCGCACACCA
GTGTTTAAAGCAGCACAGTCTGCGTTGGACGATGGGGGTGGTTTTGAACG
TGCTGCTGCTAGACTTGGTTCTGTTTTGGTTCTCGATGTGTATTGTGCGT
TTGCGCATGCGCCTTTGTGTTTGCGCACGCGCCTTTGTGTTTGCGCACGC
GCCTTTGTGTTTGCGCACGCGCCTTTCGACCCGTGCAAGGGAAAGCCGCC
GCATTTGTGGAGATGCCACGTCCCCCGCATCCGCTCGTCTTGCGCCGTTT
GTCGCTATTACACGAACCGCGCGTGGTCAAAGCACGGGCCATTTTTTATA
TTCGACGTTGACGACCGCAGCATTACCGAGCAAGAACAACGACAATGCAT
CGCCACCACAATATTAAAAATATAAAACAGGGCGTTCGGAGGGCAGTCCC
TCGACTACGGCAAGGGAGGACAGGCGTACCGCTGCGCGTGTGCCGCGGAC
AGGACCGGGCACGCGATGCTGCACACCCTTTACGGGCGGTCGCTGGCCTT
TGATACAACGTGAGTTGGTGGACGAATGCGCCTGCAGTGTTTGGCTGACG
GGTTCCGGGCGCGTGCGGACCGTGTTTCGTACAACGTGTTAGGCGTTTGG
ACTCGGCTAAGGCAGCCGTGGTGGTTGCATTCGCTTTCGCTGCCCGCCTA
CTGTGCTTGGAAAGCCGAGGCGGGGCGTGAGCACAGTATATTTTCGTGAG
GGGTTGGAAAACCTGCTTTGGTCTCCTCGTCTTCACCCCACCCCCCACTT
CCCCCGCGGTCACCGTCCTTCTCCCCCAAACGAGGTTGCCGCGCGCTCCG
TTGGTCTACTCGTGTTTGATTTCTACGTTAGGACTCTCTTGACATTTTCC
ACGGCAGCCTGACCCCCTCCCGTCATGTTGTCTCCCCCGCCTCCGCTGCG
GACGGCGATTTTACATTTCCCTCTTGTTCTTTTTCGGAGTGCCGTCCGTG
ACAAGCGCCTACCTCAACAGAGCTTTTGATCCCCCCCCCCCCCCCCCCCC
CGCCCCGGGGACTCATGTGTCCGTGCCCCCCCCCCCCCCCCCCCCCNNNN
NNNNNNCCCACTGAGGTGTTTTCCCCCCCCCCCCCCCCCCCCCCCCTGGG
GGTTCTTTTTTCTCGGCCCCCCCCCCCCCCCCCGCATATCCTAACAGCTA
CTTTATCGAATACTTCGCGACGGACCTGCTAATGACCCCAGACGGGGAGT
GCGTGGGTGTAATCGCGGTGTGCATGGAGGTGAGGGGCAGGGCGGAGGAT
TACGGTTGGGGGGAGGGGGAGGGCCGCAAGACGTATCCATCGATGTGGTG
GCAAATGGGGCTGCGCGGTACTACCGTAGCGGGACGAATCTACCGGTTGC
GATACAGCTGCGTTGCGTATGGAGGTGCGAGCAGGGCCAACGACATCCCG
AGGCGTACTCTCTCGCACAATGGCTGTCCGGATGTTGTTGTACCAGTCTA
AGGGATTCCTGTGCTCGTCTTTCTCTCTCTCCCCCCTCCTCCCTCTTCTA
TCTCGGCTGCTGCCTACCCAACGGCACGCCACACAAACGCCAATTCGGCA
CGACACAAACACGGCGGCTTCAAAACGATGTCGGCGGTAGGACGGAAGCA
TCCACCGCTTCAGCGCGAAGAACACGGTGCTCGCTACCGGCGGCTACGGT
CGCGCCTTCTTCTCGTGCACCTCCGCGCACACGTGCACCGGAGACGGGGG
TGCGATGGCCATCAGAGCCGGCATCCCGCTAGAGGGTGAGTAAGAGCCGC
TACGCGATCGTGATGAGGATGATAATGATGGCGATGGTGATGGTGATGGT
GATGATGACAAGCGTGATTGCGTGATGAGATGATGACGGTGGTGGTGGTG
GTGACAAGTTATTATGATGACAAACGTGATTGCGTGATGAGGTTTTGGTC
GTGGTGGTGACAAGTTTCGATGATGGCACACGTGATTGCGTGATGAGATG
GTGGTGGTGATGAACAAACGTGATTGTGGTTGTAGTGCAGGTGTGTGGCG
CGGACGATGCATCTCCGACTAAACGTTGCGGTGGTAGTATTTGCAGTGAG
GTCATGATATGTGGGGGCACGACGATACCCTGTTCATGACGGGAAAAAAT
GTGTGCAAGACGACGAAGATACATACCATGGTACGCCACCGATGTGGTCG
TGATCGTGAGAGTTACACAACACACGGGTCAAGATAAGTTTTTCCGGCCG
CAGCAGCGGCGGCATTCGCGATGAGGGTAAACAAGGATACACCGATGCTC
GAGATACTACGATTCAGCAAATGGGTTTTACACAATGTTGGCAAGTTGAG
AATGAAGAACACCGATAGAGTCAAATGCTTTCGACATGATATTCGGCATG
TTGAGAATGCCAGACACCGATATGAGTAGCTGGTATGGTGAGTCTAAACG
ATTGCGCGTTGGCGTTCTACCCACCGGCGGGCGTGAGTCACCGACGTAGA
CTCGGGCATTGCGTACCCTGTTGTTGCAAGGTGCCGATGGGTGAGCCCCC
GCGGCGTCTGGCGACAATCGGCAACCGCGGATTGTGGCGCGATATGTAGC
TGAACTACAGCTCAAACCAGTTCCGCGATACAGGGCCGAAGTGCAGCGCA
ACAATTTCCCCGTCGTCAGGCCTCTCTTTTTTTGCTCTCTCTCTTCTTGT
CTCTCACCATGTCCTGCCTTTCCTCTGTCGCCCCCGTGTCCCCTGTCGTT
TGCCGTTTGCGTACACACGTGTCGCGCTTGTCCGTACGCGTGTACGCGAC
CCCGCCCCCCCCCCCACAATACAAATAAAAACAAACACACACATCCGAAT
AAAATAGACCCGGAGTTCGTTCAGTTTCACCCCACGGGCATCTACGGGGC
CGGCTGCCTCATCACCGAGGGATGCCGAGGAGAGGGCGGAATCCTCAGGA
ACAGCGAGGGGGAGCGATTCATGGAACGGTGAGCTAAAGCATATACCCAT
GGTATGGTGGTATCGTACGTATGGTGGCGCAACAAGAGATATAAGAAATA
GATTTTGACTAGAAACGCGGAGCTTCCGGACGTGCGTATGTCGTGGGGCT
TTCCTTCTTGTCTCCTGCTGTGTGGCAGCCTTTGTTTTGTTTATTTTGAT
GGTGTAGTCTCTCTTAATAGGCCTTGGTGGGGGCATGCAAATCATGAGTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCGGCGCG
GTGACCGCCCTCCCGGCCCGGGCCCGGGCCCCCCCGCCCGGGGGCGGACG
CGGGGGNNNNNNNGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGATTGCAGATGGGCGGCATCC
TTGTCTTCTCGTGGGAGGGGGTGACGTTCATGAGCAGAAGAGAGGGAGGG
GAAAACATGCCAAGGATGCGTGACGTCCTGATTCTTTCGTTTGGTACGAA
AGGAATGAAGAGGAGGAAACGGAGCGTATTTTTTGTTTTGTGATGCCATG
ACAAGGCGGTTTTTTTTTTGTGTGATGCGGCGCTTCTGTTGGTGAGGTGG
GGGTTTGGAAATAGACGGCGGCCTCGGTTTGCTGGATCAGCGTTGTGCAT
GTTTTTTGTTTACGAAGGTGGGGTGCGGGGGGGGGGGGGGGGGGAGAGGG
ACGTACCCACGCGCCGCAGAGCACGCCCTCCGAGATGCATGCGTGTGGGT
GGTGCCTGTTGGTGGTAGAAATAAAAATAATGGGGAGGAATTTAGGAAAA
TGTTGTTTCGCACGTTTATCCTGCACCAAAACCACTCCTCCAACATTGGG
CAAGACATGCATGCATTCGTACGTACGGATTTCTCCCTCGCCCAGAACTG
ATTTTTAGTCCTTGAGTTGTACTTGGCTCACGCTGTCCGTCCCTGTCCCC
TTCCTGACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCTCCCT
ATATTTTTTTTAGCATCTGGACCACCTTCCCGCGGAGCTGTTGGCGGAGC
GCCTTCCGGGGATCAGCGAAACCGCGCAGATTTTCTCCGGCGTGGACGTT
ACGAAGGACCCTATCCCGGTGCTCCCGACGGTGCACTACAACATGGGAGG
CATCCCTACGAACCACCTCGGGGAGGTGAGTGTTTTTTTTTGTTTTGTCT
TAAATATAACAAAACAAACCCATCTCTTCCACAGCTAAGAAGGAGTTTTT
TTTTTGTTTTCCTTGAGGAGTCGGCATGGACGGTACTGCAGGCGGCTGGC
GGATGAACCGAAGGCAGGCGTTCGATATGGGTGGAACGAAAAAGCGCGGG
GCAGCAGTAGGGCGTCAAGTGTTGTGTGTTTTCTTGGTGTAGTTCTTCTC
TTTTTGCTAGCGTTGTCGAGGGAATGAGCTGGCAGAGATCTTGCCGGCTG
TGAAATGTTCGGAGTGTATTAACTACGCGGTTTTTTGTCTTGGATCGTTT
GCATAGCGACGGCCATCTACTTTGCCGTATGAGCATGCGTTATTTGCTGG
GTTCAGCCCGGCCTTGGCGTCGTGAAGAAGCGAGACAGCAGGCACCAATC
AGTGGCGACTTCAAACATGACCTCAACGATTCCAGATGAACAATGAACGG
CCAACCGAACGACACACCGGAGCACGACCACACGGCCACGACACGCAACA
ACAAACAACACATCATCAGCAACAACAACAACAACACACACACACGACAC
ACAACATCAGAAACAGCCTGAAACAGAAGCAACAAAATGGTCAAAGACAA
CAACAGTAACAATAACAACAACAAGACAACCGACAACAAACCGACAACAG
GTGATCAGGCCCAAGAAGGACAGCGACGGCAACGTGACCGACCACGACGC
GATAGTTCCGGGCCTCTTCGCGGCCGGGGAGGCGGCCTGCGCCTCCGTGC
ACGGGGCTAACCGCCTCGGGGCCAACTCCCTCCTCGACATCGTGGTCTTC
GGGAGGGCGTGCGCGCTGCGCATCGCCGAGATCTCCAAGCCGGGAGACAA
GGTGAACATCGTTTTTTTTATTGTGTGAAATATTTTATTGCGTCTATCTG
TGCCTGGAAAAAGCACAAACCGCTGTGGAAATAAAAAGAAGGTGAATTTT
TGCAAGGCTGTTCCATGTCAAGACCCTTTTTTTGGTGTTTTGTCATTGTT
TATTTTTTGGTGTTTTCGTGGAAGGCATACAAATAATTGTTCAATAACAT
TAGTGTTATAACGTTATAACAACAACAGGTGGCCGAGGCCCCCAAGTCCC
AGACGGAGAAGAGCCTGGCGGCGCTCGACAAGACTCGCTTCGCGGACGGC
GCCACCCCCGTGGCCGACCTGAGGCTCAAGCTGCAGAAGGAGATGCAGGA
CCACGCCGCGGTGTACCGGACACAGGAGTCCCTGGCCGAGGGAGTGGTGA
GATAATTTTTTTTTTTCTTGGTTCTTTCACGCTATCACGGTTTTTGACGG
AGCATCGTCTCACCACGAAAAATGAGGGGACTGTCACCATAGTAGCGCAA
CATGGCCCCCTGTGTGTCGAGTTTGGATAGTGTACCCCTTGCTTGTTGTC
GCGTGTTCTTGCACCAGTAGACTGGGGTGCCGTCCGTCCGCTCGGTCGGT
CGCTCGGTCCGCTTGCCCAATGCTTTGGTTCGCCGATGCCGGTATCTACG
GTTTTCGCCTAGTCTTCCTGAACGGAACCGAACCGAACCGAACCGAACCG
AACCGAACCGAACCGAACCGAACCGAACCGAACCGAACCGAACCGAAGCT
GTTTCTACGAACACCGGTTTCTACCGATGTTTTGTGTTTGGAAAAAGTCG
TTTGCACAAAGCTGCTGATACAACACATCTTGTTTTGTCACGGAGTTGGA
TGGCAGACGCCTTGAGAGCGGCACCAAAAGCAGGGCGCAGAGGTGTGTGC
ATGACCTCCCTGCCTCCCTCCCTCCCTCCCGATTTTTCGTGCGTGGTGCG
GCCGTGTATCGATCACCAGACACGAGTGGACGGTGTGGTGAGCGACTTCA
ACGACGTCAAGGTTACCGACAGGTACTGTAGGTGTTGGGTGTTGGGTGTT
CACGTTTTCCGTTGGGTTTTTGAAGTGTTAGTCGTTTGCGTACTGGTGAT
TTGAGTGTTTGCCGTGCCTGTATCACACAAGATTACGCACTTGCAGAAGA
TGACACGTCCGACAGGTCATATTTGGTTTGACTGGTCAACATGACCCCAA
CCTTGAAACTACTCACAGGACATACAACAGGGCGACTTATGATACCACCG
CCCCCACACACAATACACACCCGATGCTTTTTTTTCTTTAGCAGCCAAGT
TTTTAACACGGGGACGTGTTATCTCGTGCAACGTACGGTTTGTCAAGGCG
AATGCAGCTGTTGAGTGTTTGTTCGTGGCCGTCACGCCAGCTGGTGCTGT
TCAACCGACGTCGGTGGTCCGGTGGGCAGGGGGAAGGAAATGAACACGAG
TTGCCGGAGTGCTCAATAGTTTCTTGCGGCAGTACCTAGTGTTGAGTTGT
TTTCGCGAGTTTGCTGCGTTCGAGGCGTTCAAACCCGTGGCAGCACATAC
CGGCCAACGAGGCAGAACGCAGCAACAACGGTCTGAACAACACACAAAGA
TCACCCTTATTGTACCATCTGCACCCCAGTATCGACTGCAGTGTGCGTTG
CCCCCCACCCCCCCCACACACCCGGCATCGTTTGCGGTCCTTTTCTCTGC
ACGCGAGTCGTCAATGGGAAACCATGGTCAACTCGCAACTCTACTGGAAT
ACTGCTGTCACGCCCGCCTGCTCTGCGGCCGTGGGTGGTTTTTTTCGCGT
CGAGGCTCAGCCCACTGCAGTGTGCCCACCGTGCCGCGCTGTGTTGCGTT
GCCCACAACGGCGGCGTTCGTCAACCGCGTCTACGCATGTCCAGAATACA
GAGTTAACAACTTTCATTTTTGCCCTCTCACAATGTACAAGAGGAACGTA
GTCGAGTATGGGCCGCAGCAGCCGTCCCATCCCAGCACAATCCAATCAAA
CCTCGCTTTGGTGTGAAGCACAATACAGATTTTTTCAAGTAGAAATTCAT
CACTCAAAACGCATGCACACGTGCGCCCGCCACTGCTGTTTTCTATTGGT
TTGTTGTATGTAGGTCGCTCATCTGGAACACAGACCTGATCGAGGCGATG
GAGCTGGAGAACCTCCTTTCGAACGCGGCGTGCACCATGCACGCGGCGGA
GGCGAGGAAGGAGTCCCGCGGGGCGCACGCAAGGGAGGACTTCCCCGACC
GGCTGGACGACACTTGGATGAAGCACAGCATGACCTACTTCGACTACGAC
ACCGGGAAGACCAAGGTTGGTTTTGGTTGATTTTGGATGTGGTTTAGTTT
GATTTGGTTGGTTGATTCGGTGGGTCGGGGTCCGGGGGATTGGCTTTAGA
AATCGCCACCACGAGTACAACATAGACATGCAGTCTTACGCTTTTGTTGT
TTTGCCAAGAGTTTGCCACGAGTTCTTGCTGCCGCTCTTCTTGTTGTTGG
GGGGTGGCTTGTTTTTTTGCCGCATCTGTTTGGATTGTGGTTGATTTGGA
TGAAATCGGTCGCGCTTGGAGTGCCAGGCAGACCAAACGAAAGCACCCGG
CCTCACCTGCCGCAAGTTGGAATTTTGTTTTTCGTTGACGAGGTTCCCCG
ACAGGCAGGGCGCAGAGGAAGGTTGGCGAAAGCGAATTTTAGTTATCTTG
TTACGGAACTTCTTCACTTTTTCTTCTCTTTTTTTTGTCGGGGCCAACTT
CCGTTGTTTGCTTTTGAAACACATGACTTCGGTGTTGCATCCGTCCGAAA
AGTGTCTTGGATGTAGCTCGTTGCCTCTTTTTCTTTGTCGGAGATTGTGC
GTGCATCGTGTCCAAGAGCAGTCGCAGGGCACCACAATAGCTTGCGGGAA
ACGGAAGCACTGCATAAGGTTTGTGCGGTAGGATTGAAAACGCACACCAC
AAATGAAGGCGAGAGTCCTTAAAACGCCGAGCCTTGACCTTGCTTTGGGT
ACGAGGAAGATGGCAATTGGAAACAGGTTTGAGTACTGTTGTTGCTTGCC
AGGCGATGAACGCCGTACAAGCTGTGCTTTGCCGTGTTTGCGACTCATTT
TTCCGGAGGGGGCGGGGGGGGGGGGTGAGAGGGCTAGGGGGGTGGGGTGA
AAACGGGGCGGTGTCCAGCTGTACGCGGGCGGATATCTTGTTATTGGTCG
TTTTTCATTTTTCACGTCCGCCGTGCGCTGGTTCAAGGGTGCATGCACAC
CTCTCACCGCTACTGTAGAACACGGAGAAGAACGACAGTCCATGACGTCA
TGCAACGTGGAAACCAAGTGTTTTGCATGTTCGTAGACGTGAAGAAAAAA
ACACACGCAGCCGGCAAGAAAGAGGGGTGTCATCGGCGAAGAATCGACTC
CTGGTGTGCGTCAAAACGAGGCGGTATGTACTTGTCCAGGGCTCGCACGC
TAGACACATCGCAGTCAATTTAGAAGGTCTTCCTTCGAGACTGGGTTGAC
CTGAGGTTTTCGTGCTCGCTCGCTGACTCTTTTCCTCCAACTCCTCCCTT
GCTGCCCGTGCTGTCGCTGCTGCTGCTGCTGCTGCTTCTTTTTTTGCCCC
CATGCCGTCGTTTCGCCACGCGCGCGCGCCGCATCATCTTGTTGCACGCG
ATCCTTATGCCAGGTGGAGTACCGACCTGTGCACAGCTTCACGTTGGACG
AGGAGGAGGTGAAGATGGTTCCCCCCTTCAAGCGAGTGTACTGAATCCAC
TCAGATGTATCACTCGCCAATATGGGAAATCACATGATGGGGAATCTCAA
GATTGGAAAAAAGAGTGCGTGGGGCGTCGGGGGAGAAAAGCCGAAGTTTT
GATAAGGAAGTCATCGGGATGGGTCGACTCTTTTTCTTCTCCAGTCTTAC
GCGCAAGTTTGTAGTAATAATTGCTGCTGCCCGCTGTGCCTCTACTGCTG
TGATAGGATCTAGACTCTTCTTGTTTGCGATCGGTGGAGCTTCGGTGTTC
CGTGTAGCCGAAGAAAGAGCTTCCTTTTTGTGTTTCCGCTTCTGGCGGCA
CGATGGAAGGGCACGCACAGGGAGCTGCCACGCACGAGGGCAGAAAGGTA
GCGCATGATGGATGATGTTGGAAACCAGGGGCGTGTTTTTCTCGTAGTTT
TGCCGTCTCTTTGCGGATCGCGAATGAATCGCAAGTGTCTGCGTCGTCAA
ACAAACTTGTGAATGATGTGGGCATGGGGGGAGAGCAACGTGATTGTTGT
AGTGCGCAGCCACTGTCAGTCACGAAGTGTAGCGAACGGCTGTCGAGGGG
GGCGGAGGGCTGAAGTGGAGGGAGCTGAGTGGTGGTGCGCTTCATTGGGT
CGTACATCCGGTCGTCCTGTATGAGGAATTTATCTGGTTGACAAACTTGG
TCTGGTCTCCTGTTTTTCCATCGACCATCCGGCCATAAATTGGGGACACG
AATTTTTTTCTTGTGATTCTACTGCCGGAGAGATATTCTCAAGGGCTTCG
GTCACCGAGGGGGCTAGAAAAGGCAAGCTGCACCACAGCGCAGTGTGTAA
ATCTTCGGCGTACATGTTTTCGTTCGTGTTGGTGACCCACCCTCCAGTTT
TGCTACATACATGTCAGGAAAGAGGGGGCACACATACGCGGGAAAATGAG
AAAATTGATTTTCTTCTGATCATCAGAGGAACTCGGAAGGACTGGGCGAT
CGTGCCGCCCGCTTTGAGAAGCAACTGTTGTTTCTCCGAAAGTATAACCA
CATGGTACCGTGTTGACCTCATCGGCGCGGCCGGCACCCCTTTGTATCAG
GAAGTTCCGATCGATGATGGTGGACTGTGAGCTGCTGGAGTTAATGCTGT
TTTCGG

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig105:105..11810+

>mRNA_E-siliculosus-1a_F_contig105.353.1 ID=mRNA_E-siliculosus-1a_F_contig105.353.1|Name=mRNA_E-siliculosus-1a_F_contig105.353.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2934bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig105:105..11810+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGGGTGTGCCGAGGCGGGCCTAAAGACGGCCTGCATCACCAAGCTCTT
CCCGACGAGGTCGCACACGGTGGCGGCGCAGGGGGGGATCAACGCGGCCC
TGGGGAACATGACCGAGGATGGGGTGTGCCGAGGCGGGCCTAAAGACGGC
CTGCATCACCAAGCTCTTCCCGACGAGGTCGCACACGGTGGCGGCGCAGG
GGGGGATCAACGCGGCCCTGGGGAACATGACCGAGGACATGTACGACACC
GTCAAGGGGTCCGACTGGCTCGGAGACCAGGACGCGATCCACTACATGTG
CCGAGAGGCGCCGCGGGCGGTGCTGGAGCTGGAGTCGTACGGGTTGCCGT
TCTCTCGTACAGAGGAAGGGAAGATCTACCAGCGACATGTACGACACCGT
CAAGGGGTCCGACTGGCTCGGAGACCAGGACGCGATCCACTACATGTGCC
GAGAGGCGCCGCGGGCGGTGCTGGAGCTGGAGTCGTACGGGTTGCCGTTC
TCTCGTACAGAGGAAGGGAAGATCTACCAGCGGGCGTTCGGAGGGCAGTC
CCTCGACTACGGCAAGGGAGGACAGGCGTACCGCTGCGCGTGTGCCGCGG
ACAGGACCGGGCACGCGATGCTGCACACCCTTTACGGGCGGTCGCTGGCC
TTTGATACAACGGCGTTCGGAGGGCAGTCCCTCGACTACGGCAAGGGAGG
ACAGGCGTACCGCTGCGCGTGTGCCGCGGACAGGACCGGGCACGCGATGC
TGCACACCCTTTACGGGCGGTCGCTGGCCTTTGATACAACCATCCACCGC
TTCAGCGCGAAGAACACGGTGCTCGCTACCGGCGGCTACGGTCGCGCCTT
CTTCTCGTGCACCTCCGCGCACACGTGCACCGGAGACGGGGGTGCGATGG
CCATCAGAGCCGGCATCCCGCTAGAGGCATCCACCGCTTCAGCGCGAAGA
ACACGGTGCTCGCTACCGGCGGCTACGGTCGCGCCTTCTTCTCGTGCACC
TCCGCGCACACGTGCACCGGAGACGGGGGTGCGATGGCCATCAGAGCCGG
CATCCCGCTAGAGGACCCGGAGTTCGTTCAGTTTCACCCCACGGGCATCT
ACGGGGCCGGCTGCCTCATCACCGAGGGATGCCGAGGAGAGGGCGGAATC
CTCAGGAACAGCGAGGGGGAGCGATTCATGGAACGACCCGGAGTTCGTTC
AGTTTCACCCCACGGGCATCTACGGGGCCGGCTGCCTCATCACCGAGGGA
TGCCGAGGAGAGGGCGGAATCCTCAGGAACAGCGAGGGGGAGCGATTCAT
GGAACGCGAAACCGCGCAGATTTTCTCCGGCGTGGACGTTACGAAGGACC
CTATCCCGGTGCTCCCGACGGTGCACTACAACATGGGAGGCATCCCTACG
AACCACCTCGGGGAGCGAAACCGCGCAGATTTTCTCCGGCGTGGACGTTA
CGAAGGACCCTATCCCGGTGCTCCCGACGGTGCACTACAACATGGGAGGC
ATCCCTACGAACCACCTCGGGGAGGTGATCAGGCCCAAGAAGGACAGCGA
CGGCAACGTGACCGACCACGACGCGATAGTTCCGGGCCTCTTCGCGGCCG
GGGAGGCGGCCTGCGCCTCCGTGCACGGGGCTAACCGCCTCGGGGCCAAC
TCCCTCCTCGACATCGTGGTCTTCGGGAGGGCGTGCGCGCTGCGCATCGC
CGAGATCTCCAAGCCGGGAGACAAGGTGATCAGGCCCAAGAAGGACAGCG
ACGGCAACGTGACCGACCACGACGCGATAGTTCCGGGCCTCTTCGCGGCC
GGGGAGGCGGCCTGCGCCTCCGTGCACGGGGCTAACCGCCTCGGGGCCAA
CTCCCTCCTCGACATCGTGGTCTTCGGGAGGGCGTGCGCGCTGCGCATCG
CCGAGATCTCCAAGCCGGGAGACAAGGTGGCCGAGGCCCCCAAGTCCCAG
ACGGAGAAGAGCCTGGCGGCGCTCGACAAGACTCGCTTCGCGGACGGCGC
CACCCCCGTGGCCGACCTGAGGCTCAAGCTGCAGAAGGAGATGCAGGACC
ACGCCGCGGTGTACCGGACACAGGAGTCCCTGGCCGAGGGAGTGGTGGCC
GAGGCCCCCAAGTCCCAGACGGAGAAGAGCCTGGCGGCGCTCGACAAGAC
TCGCTTCGCGGACGGCGCCACCCCCGTGGCCGACCTGAGGCTCAAGCTGC
AGAAGGAGATGCAGGACCACGCCGCGGTGTACCGGACACAGGAGTCCCTG
GCCGAGGGAGTGACACGAGTGGACGGTGTGGTGAGCGACTTCAACGACGT
CAAGGTTACCGACAGACACGAGTGGACGGTGTGGTGAGCGACTTCAACGA
CGTCAAGGTTACCGACAGGTCGCTCATCTGGAACACAGACCTGATCGAGG
CGATGGAGCTGGAGAACCTCCTTTCGAACGCGGCGTGCACCATGCACGCG
GCGGAGGCGAGGAAGGAGTCCCGCGGGGCGCACGCAAGGGAGGACTTCCC
CGACCGGCTGGACGACACTTGGATGAAGCACAGCATGACCTACTTCGACT
ACGACACCGGGAAGACCAAGGTCGCTCATCTGGAACACAGACCTGATCGA
GGCGATGGAGCTGGAGAACCTCCTTTCGAACGCGGCGTGCACCATGCACG
CGGCGGAGGCGAGGAAGGAGTCCCGCGGGGCGCACGCAAGGGAGGACTTC
CCCGACCGGCTGGACGACACTTGGATGAAGCACAGCATGACCTACTTCGA
CTACGACACCGGGAAGACCAAGGTGGAGTACCGACCTGTGCACAGCTTCA
CGTTGGACGAGGAGGAGGTGAAGATGGTTCCCCCCTTCAAGCGAGTGTAC
TGAGTGGAGTACCGACCTGTGCACAGCTTCACGTTGGACGAGGAGGAGGT
GAAGATGGTTCCCCCCTTCAAGCGAGTGTACTGA