prot_E-siliculosus-1a_M_contig9.17077.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17077.1
Unique Nameprot_E-siliculosus-1a_M_contig9.17077.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length859
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17077.1 vs. uniprot
Match: A0A6H5JAF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAF4_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 3.960e-25
Identity = 53/64 (82.81%), Postives = 58/64 (90.62%), Query Frame = 0 
Query:  692 WPDRLEPYNNISVIATLLAGFGLAIFPFPRSDLPEGHDFLLGLTGHVVYNFLMCCSFGTNMLVA 755
            W +RLEPY+NIS+IATL AG GLAIFP PRS++PEGH FLLGLTGHVVYNFLMCCSF TNMLVA
Sbjct:  151 WQNRLEPYSNISIIATLFAGVGLAIFPLPRSNVPEGHGFLLGLTGHVVYNFLMCCSFSTNMLVA 214
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17077.1 vs. uniprot
Match: D8LFK2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK2_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 6.260e-21
Identity = 51/73 (69.86%), Postives = 56/73 (76.71%), Query Frame = 0 
Query:    4 TMAQTDREALVALYDATDGANWTKNENWITVDDLSQWHGVEINGDGRVVKLMLFANNLRGPIPAGLGALDELQ 76
            TMAQTDR+ALVALY+AT GA W  N+NW T   LSQWHGVE+N  GRVVKL L  NNLRGPIP  LGAL  L+
Sbjct:   70 TMAQTDRKALVALYNATGGAEWKNNQNWTTSAALSQWHGVEVNTQGRVVKLSLGWNNLRGPIPKELGALSRLE 142
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17077.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 2.060e-19
Identity = 47/73 (64.38%), Postives = 53/73 (72.60%), Query Frame = 0 
Query:    5 MAQTDREALVALYDATDGANWTKNENWITVDDLSQWHGVEINGDGRVVKLMLFANNLRGPIPAGLGALDELQQ 77
            MAQTDR+ALVALY AT G NW +++NW T  DL  WHGV++N  GRVVKL L  NNL G IPA LG L  LQQ
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQQ 73
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17077.1 vs. uniprot
Match: D8LFJ9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ9_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 3.870e-19
Identity = 49/77 (63.64%), Postives = 52/77 (67.53%), Query Frame = 0 
Query:    2 PSTMAQTDREALVALYDATDGANWTKNENWITVDDLSQWHGVEINGDGRVVKLMLFANNLRGPIPAGLGALDELQQL 78
            P TMAQTDREALVALY A  GA W  N NW T   LSQWHGVE+N  GRVV L L+ NNL+G IP  LG L  L  L
Sbjct:   22 PYTMAQTDREALVALYTAIGGAKWRNNRNWNTSAALSQWHGVEVNSQGRVVNLFLWDNNLQGRIPTELGNLHMLDTL 98
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17077.1 vs. uniprot
Match: D8LL09_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL09_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 9.960e-19
Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = 0 
Query:    3 STMAQTDREALVALYDATDGANWTKNENWITVDDLSQWHGVEINGDGRVVKLMLFANNLRGPIPAGLGALDELQQL 78
            STM QTDR+ALVALYDA  G NW  N NW    DLS+WHG+ IN  GRVV++ L ANNL+G IP  LGAL +L++L
Sbjct:   49 STMPQTDRDALVALYDAAGGFNWKNNGNWNADADLSKWHGININDQGRVVEVHLAANNLQGSIPEALGALSKLERL 124
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17077.1 vs. uniprot
Match: A0A6H5JFA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFA4_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 2.380e-18
Identity = 48/75 (64.00%), Postives = 54/75 (72.00%), Query Frame = 0 
Query:    2 PSTMAQTDREALVALYDATDGANWTKNENWITVDDLSQWHGVEINGDGRVVKLMLFANNLRGPIPAGLGALDELQ 76
            P TMAQTDRE+L A Y+ATDGA W +N NW +   LS W+GVE N  GRVVKL L +NNLRGPIP  LG L  LQ
Sbjct:   32 PPTMAQTDRESLTAFYNATDGAKWIRNTNWGSGAPLSDWYGVEANDQGRVVKLYLSSNNLRGPIPLELGNLSALQ 106
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17077.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 1.250e-17
Identity = 49/74 (66.22%), Postives = 56/74 (75.68%), Query Frame = 0 
Query:    5 MAQTDREALVALYDATDGANWTKNENWITVDDLSQWHGVEINGDGRVVKLMLFANNLRGPIPAGLGALDELQQL 78
            MA TD +ALVALY ATDGANW +N NWIT  DLSQW+GVE+N  GRV  L L++NNLRG IP  L AL  L+QL
Sbjct:    1 MAATDYDALVALYHATDGANWKQNRNWITDTDLSQWYGVELNDQGRVACLNLYSNNLRGLIPKELEALTMLEQL 74
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17077.1 vs. uniprot
Match: A0A6H5K3D6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D6_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 3.730e-17
Identity = 45/76 (59.21%), Postives = 50/76 (65.79%), Query Frame = 0 
Query:    3 STMAQTDREALVALYDATDGANWTKNENWITVDDLSQWHGVEINGDGRVVKLMLFANNLRGPIPAGLGALDELQQL 78
            ST   TDR ALVAL++AT GANW KN  W T   L QW+GVE+N  GRVVKL L  NNL+G IP  LG L  L  L
Sbjct:    6 STKMSTDRAALVALFNATGGANWKKNTKWNTDAPLGQWYGVEVNDAGRVVKLSLRYNNLKGHIPRQLGDLGALMTL 81
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17077.1 vs. uniprot
Match: D7G496_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G496_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 8.050e-17
Identity = 45/74 (60.81%), Postives = 54/74 (72.97%), Query Frame = 0 
Query:    5 MAQTDREALVALYDATDGANWTKNENWITVDDLSQWHGVEINGDGRVVKLMLFANNLRGPIPAGLGALDELQQL 78
            MAQTDR+ALVALY+AT G  W  N+NW T   LSQW+ VE+N  GRVVKL L+ NNL+GPIP  +G L  L+ L
Sbjct:  125 MAQTDRKALVALYNATGGVKWKNNQNWNTSAALSQWYRVEVNSQGRVVKLSLWNNNLQGPIPVEVGRLAVLEYL 198
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17077.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 9.590e-17
Identity = 47/74 (63.51%), Postives = 52/74 (70.27%), Query Frame = 0 
Query:    5 MAQTDREALVALYDATDGANWTKNENWITVDDLSQWHGVEINGDGRVVKLMLFANNLRGPIPAGLGALDELQQL 78
            MAQTDR+ALV LY AT G NW + +NW T  DL  WHGV++N  GRVVKL L  NNL G IPA LG L  LQQL
Sbjct:    1 MAQTDRDALVVLYRATGGENWRERQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGNLQQL 74
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAF4_9PHAE3.960e-2582.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFK2_ECTSI6.260e-2169.86Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JK91_9PHAE2.060e-1964.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFJ9_ECTSI3.870e-1963.64Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LL09_ECTSI9.960e-1961.84Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JFA4_9PHAE2.380e-1864.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLG1_ECTSI1.250e-1766.22LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K3D6_9PHAE3.730e-1759.21Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G496_ECTSI8.050e-1760.81Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LBY3_ECTSI9.590e-1763.51Hypothetical leucine rich repeat protein n=1 Tax=E... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 96..119
e-value: 51.0
score: 7.4
coord: 144..168
e-value: 9.0
score: 13.6
coord: 72..95
e-value: 160.0
score: 3.3
coord: 264..287
e-value: 84.0
score: 5.7
coord: 216..240
e-value: 74.0
score: 6.1
coord: 288..312
e-value: 18.0
score: 11.2
coord: 384..408
e-value: 78.0
score: 6.0
coord: 120..143
e-value: 110.0
score: 4.6
coord: 336..360
e-value: 110.0
score: 4.7
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 146..167
e-value: 0.21
score: 12.2
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 171..229
e-value: 8.0E-9
score: 35.1
coord: 266..325
e-value: 3.5E-7
score: 29.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 3..164
e-value: 4.5E-43
score: 148.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 317..499
e-value: 1.1E-43
score: 151.4
coord: 168..316
e-value: 1.2E-49
score: 171.0
NoneNo IPR availablePANTHERPTHR45974FAMILY NOT NAMEDcoord: 290..463
NoneNo IPR availablePANTHERPTHR45974:SF51coord: 179..290
coord: 56..210
NoneNo IPR availablePANTHERPTHR45974:SF51coord: 248..388
coord: 99..243
NoneNo IPR availablePANTHERPTHR45974FAMILY NOT NAMEDcoord: 179..290
coord: 248..388
coord: 99..243
coord: 56..210
NoneNo IPR availablePANTHERPTHR45974:SF51coord: 290..463
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..698
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 818..842
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 720..738
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 813..817
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 789..812
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 765..788
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 699..719
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 739..764
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 843..858
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 311..473
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 45..353
NoneNo IPR availableTMHMMTMhelixcoord: 738..760
NoneNo IPR availableTMHMMTMhelixcoord: 789..811
NoneNo IPR availableTMHMMTMhelixcoord: 821..843

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:1796447..1815877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17077.1mRNA_E-siliculosus-1a_M_contig9.17077.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 1795464..1819235 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.17077.1 ID=prot_E-siliculosus-1a_M_contig9.17077.1|Name=mRNA_E-siliculosus-1a_M_contig9.17077.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=859bp
MPSTMAQTDREALVALYDATDGANWTKNENWITVDDLSQWHGVEINGDGR
VVKLMLFANNLRGPIPAGLGALDELQQLWLYDNKLSGSIPPELGDLAALQ
QLSLQRNRLRGSIPKGLGGLTNLKGLGLGNNNLSGHIPPQLGNLGSLERL
DLSWNRFHGLIPPELGELAALKYLYLECNQASGLIPKELGGISELIELDL
SDNRLTGPIPKELGHLPKLTGLVLNNNKLAGPIPRELGNLSQLVGLLLND
NKLSCTLPKELGNLTALTVLKLESNRLQGSIPRELGNLTALTVLSLENNR
LQGPIPREIGNLAALQALFLWGNELTGTIPKELGNLAALRMMWLQHNSLE
GSIPPVLGDLTALQLLYLWDNELTGHIPRQLGKLANLQHLVIGKNRLSGT
IPKELGNLRALMVMFLQRNCLEGPMPPEVESIGELEQLCAWGNQLTGSIP
PYLDILDDMERLSIDRSRFGGAISRRPGARFGAPGPTWNIPSHLVSLDGR
DRHGHVVLLSESLTPQPGNQRDRPLFGQEKKQQSGFLSPQPVNPPLAGRE
EKMMSLATMFALANPGSLSPQPGSTLLGQEEKQQSGILEVPYGEREAAYR
NPYGYPPYPYGHGDEVGQQVPNSPAGSTSTESGPNSRPRGMDELMSRVIR
RRMDNGKLRQQVSNSSAGSTNEENGSTSEESADTSTKERDDWPDRLEPYN
NISVIATLLAGFGLAIFPFPRSDLPEGHDFLLGLTGHVVYNFLMCCSFGT
NMLVAVVLALQLYFTQRLATLHSPTVASRFMKSTLRIRHFAVCGFSFFSF
PAFMIAFTILLFTVLDEAAAICTSVVTLVGLGLAAGSTFYYFREFGNAVQ
ECNNHGGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR003591Leu-rich_rpt_typical-subtyp