prot_E-siliculosus-1a_M_contig9.17059.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17059.1
Unique Nameprot_E-siliculosus-1a_M_contig9.17059.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length437
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17059.1 vs. uniprot
Match: D7G4I1_ECTSI (Predicted mitochondrial protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I1_ECTSI)

HSP 1 Score: 769 bits (1987), Expect = 2.170e-279
Identity = 401/436 (91.97%), Postives = 405/436 (92.89%), Query Frame = 0
Query:    1 MRWLWAGALASTMGNVMASTSLDRSAAEILAFGSCGXXXXXXXXXXXXXXXXXXXXXPQHVSRISAEPATMSLTTRAPADSGDSSAMRPGREATAAGTRAAGLPSFWAAFSPSRAGPGRALVSPLSAKADSDENGVMDKKAEFYGNSAPGAVAPEGAEKQDEAAVEYAVGGDWEKSVQLIKAMRDSDFVPSVNAYVATIEACRKVGEYDHASTLLSDMNKVCLPEDLIKAYAAPHPNAPGVTQTQKVFCLAMMMRQDKIEPFEETYRAIMGLASKEKLWQVSLLLVEHLKRNGLVPGKFVYDEICSVLFKTGHPEMATMIFEDALGDKIEELNSFAPPELDLHNHTVSTALAAVRVVLLDMARKPSTRPFHDPTQELLIITGMGNNSKDGEAVIKPRVMELLSDMGLEPSMMRNNEGCIVLQPADLEAYMARTAGD 436
            MRWLWAGALASTMGNVMASTSLDRSAAE LAFGSCG                     PQHVSRISAEPATMSLTTRAPADSGDSS+MRPG  ATAAGTRAAGLPSFWAA SPSRAG G ALVSPLSAKADSDE+GVMDKKAEFYGN APGAVAPEGAEKQDEAAVEYAVGGDWEKSVQLIKAMRDSDFVPSVNAYVATIEACRK GEYDHASTLLSDMNKVCLPEDLIKAYAAPHPNAPGVTQTQKVFCLAMMMRQDKIEPFEETYRAIMGLASKEKLWQVSLLLVEHLKRNGLVPGKFVYDEICSVLFKTGHPEMATMIFEDALGDKIEELNSFAPPELDLHNHTVSTALAAVRVVLLDMARKP+TR FHDP QELLIITGMGNNSKDGEAVIKPRVMELLSDMGLEPSMMRNNEGCIVLQPADL+AYMARTAGD
Sbjct:    1 MRWLWAGALASTMGNVMASTSLDRSAAETLAFGSCGSIGSGACSSSIRSGRAG----PQHVSRISAEPATMSLTTRAPADSGDSSSMRPGGGATAAGTRAAGLPSFWAALSPSRAGRGGALVSPLSAKADSDESGVMDKKAEFYGNLAPGAVAPEGAEKQDEAAVEYAVGGDWEKSVQLIKAMRDSDFVPSVNAYVATIEACRKAGEYDHASTLLSDMNKVCLPEDLIKAYAAPHPNAPGVTQTQKVFCLAMMMRQDKIEPFEETYRAIMGLASKEKLWQVSLLLVEHLKRNGLVPGKFVYDEICSVLFKTGHPEMATMIFEDALGDKIEELNSFAPPELDLHNHTVSTALAAVRVVLLDMARKPATRTFHDPAQELLIITGMGNNSKDGEAVIKPRVMELLSDMGLEPSMMRNNEGCIVLQPADLQAYMARTAGD 432          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17059.1 vs. uniprot
Match: A0A835YUL6_9STRA (Smr domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUL6_9STRA)

HSP 1 Score: 232 bits (591), Expect = 1.170e-68
Identity = 127/313 (40.58%), Postives = 188/313 (60.06%), Query Frame = 0
Query:  149 PGAVAPEGAEKQDEAAVEYAVGGDWEKSVQLIKAMRDSDFVPSVNAYVATIEACRKVGEYDHASTLLSDMNKVCLPEDLIKAYAAPHPNAPGVTQTQKVFCLA---------------MMMRQDKIEPFEETYRAIMGLASKEKLWQVSLLLVEHLKRNGLVPGKFVYDEICSVLFKTGHPEMATMIFEDALGDKIEELNSFAPPELDLHNHTVSTALAAVRVVLLDMARKPSTRPFHDPTQELLIITGMGNNSKDGEAVIKPRVMELLSDMGLEPS-----------------MMRNNEGCIVLQPADLEAY 429
            PGA A     K ++A  +YA GG+W K+V LI  MR+ +  PS+ AY  TI A R+  E+D A  LL+DM   C+P DL   YAA  P+    TQTQ VF L                + MR D++EP  +TYRA+MG+ +K++LW +SLLL+EH++  G+ PGKF+Y+EIC+VL   G  ++A +++E +LG+ + E       ++DLH+ T++TA AAVR  L DM R+PS RPFHDP   + IITG+G  S++G AVIKP ++++L+     P+                 + ++N GC+ +QP  L+A+
Sbjct:   14 PGAEAAPETAKYNDAIKKYASGGEWAKAVVLIDKMREINLSPSIEAYGDTITALRRGLEFDRADALLADMYDACMPADLFAKYAAADPSDASSTQTQCVFALENXXXXXXXXXXXXLLLCMRTDQLEPDVDTYRAVMGMCTKDRLWHLSLLLLEHMRLRGVQPGKFIYNEICTVLDMEGKHDLAEIVYERSLGEGVFEPWIEDDNKVDLHSFTLNTARAAVRSALTDMLRQPSGRPFHDPAAPMHIITGVGRRSEEGVAVIKPAILDMLNVELQIPAEXXXXXXXXXXXXXXXXVQKHNPGCVEIQPQHLQAW 326          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17059.1 vs. uniprot
Match: D7G4J1_ECTSI (Smr domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4J1_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 3.450e-43
Identity = 100/296 (33.78%), Postives = 152/296 (51.35%), Query Frame = 0
Query:  171 GDWEKSVQLIKAMRDSDFVPSVNAYVATIEACRKVGEYDHASTLLSDMNKVCLPEDLIKAYAAPHPNAPGVTQ-----TQKVFC-----LAMMMRQDKIEPFEETYRAIMGLASKEKLWQVSLLLVEHLKRNGLVPGKFVYDEICSVLFKTGHPEMATMIFEDALGDKIEEL------------------------NSFAPPELDLHNHTVSTALAAVRVVLLDMARKPSTRPFHDPTQELLIITGMGNNSKDGEAVIKPRVMELLSDMGLEPSMMRNNEGCIVLQPADLEAYMAR 432
            GDWE ++++++ +RD    PS++ ++  I  CR+  E+D AS    +M         I+A+   HP      Q     +  VF      +A M     I+P   TYRA++ L   E  W+ ++LL+EH +R+      F +D + + + K G+ E++TM++E  + D    L                               L+LH+ T   AL  V+V LLD+ R+P  RP+    +   IITGMGNNSKD EA+IKP V+ELL D+GL P   + NEGC+ L+PA+LEAY+ R
Sbjct:    5 GDWEGALEMLQRIRDKGMKPSMSTHMDVISVCRRALEWDQASKAYREM---------IEAHLTDHPFDDMACQDYEDESNHVFARACGIVAGMQADAGIKPNNGTYRALLQLCKDEGSWEAAILLLEHSRRSKAKLNLFSFDLLITTVAKQGYKEVSTMLYELGVVDADRALLETEGNXXXXXXXXVEWPKWPLKVGRTGGAILELHDLTQGIALETVQVALLDVIRRPLRRPYWSGDKRWRIITGMGNNSKDREAIIKPAVVELLEDLGLRPEFQQRNEGCVELKPANLEAYIRR 291          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17059.1 vs. uniprot
Match: A0A813KVN0_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KVN0_POLGL)

HSP 1 Score: 58.9 bits (141), Expect = 1.180e-5
Identity = 55/213 (25.82%), Postives = 85/213 (39.91%), Query Frame = 0
Query:  266 YRAIMGLASKEKLWQVSLLLVEHLKRNGLVPGKFVYDEICSVLFKTGHPEMATMIFEDALGDKI-------EELNSFAPPE-------------LDLHNHTVSTALAAVRVVLLDM-------------------ARKPSTRPFHDPTQELLIITGMGNNSKDGEAVIKPRVMELLSDMG----LEPSMMRNNEGCIVLQPADLEAYMARTAG 435
            + A +    K  LW+ +L + + +  +GL P +  Y      L   G  E A +++ +A+   +          N+  P E             LDLHN  V  A  AV   L ++                   +   S+    D T+ L IITG GN+S  GEAV++  V+E+L  +G    LE  +  NN G I  +    +    RT G
Sbjct:  324 FNATISALEKAHLWERALQVFDDVPAHGLKPDEVTYGSTILALHAGGQQEAARLVYSEAVECSLISPVVRRVSRNAGFPGEFRQDARELHHELVLDLHNLPVVVAELAVEAALDELIALSQPVVHTGSQDEEVSSSLSLSSTVAIDTTESLSIITGRGNHSPGGEAVMREAVLEMLDKLGPRLGLEAHVDPNNPGLICCRAVRRDLMAQRTLG 536          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17059.1 vs. uniprot
Match: A0A813H707_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H707_POLGL)

HSP 1 Score: 58.5 bits (140), Expect = 1.970e-5
Identity = 44/172 (25.58%), Postives = 72/172 (41.86%), Query Frame = 0
Query:  279 WQVSLLLVEHLKRNGLVPGKFVYDEICSVLFKTGHPEMATMIFEDALGDKIEELNSFAPPELDLHNHTVSTALAAVRVVLLDMARKPSTRPFHDPTQE---------------LLIITGMGNNSKDGEAVIKPRVMELL-SDMGLEPSMMRNNEGCIVLQPADLEAYMARTA 434
            W  +L ++  +++  L P      ++   +   G    A  I+ +A         + A   +DLHN     A  AVRV LL+ A      P  D   E               LL++ G+G NSK GEA ++P V+ LL  ++GL       NEG + +   ++  ++   A
Sbjct:  967 WAHALAVLGEMRQAALEPDAGTLGKLLEAMVDEGKLPQAVAIYREANQRSSSACATIAAQGVDLHNLPAELARLAVRVALLNAATAAGASP--DKWAEDAAFRRKLGLARDGSLLLVVGLGRNSKSGEASLRPAVLHLLHEELGLHGYAEERNEGRLRVPATEIRRFLGARA 1136          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17059.1 vs. uniprot
Match: A0A5J4YS53_PORPP (Smr domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YS53_PORPP)

HSP 1 Score: 55.5 bits (132), Expect = 5.030e-5
Identity = 38/96 (39.58%), Postives = 52/96 (54.17%), Query Frame = 0
Query:  313 HPEMATMIFEDALGDKIEELNSFAPPELDLHNHTVSTALAAVRVVLLDMARKPSTRPFHDPTQELLIITGMGNNSKDGEAVIKPRVMELLSDMGLE 408
            H + A  IFE+  G     +      E+DLH+  V  AL  V   L ++A+KP+         EL IITG GN+S DG+A I+P V+ELL   GL+
Sbjct:  106 HKQAAAAIFEELNGAMNRGMY-----EMDLHSLLVHEALEFVEQRLDELAKKPNKG------NELQIITGRGNHSADGQAKIRPAVVELLDARGLK 190          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17059.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G4I1_ECTSI2.170e-27991.97Predicted mitochondrial protein n=2 Tax=Ectocarpus... [more]
A0A835YUL6_9STRA1.170e-6840.58Smr domain-containing protein n=1 Tax=Tribonema mi... [more]
D7G4J1_ECTSI3.450e-4333.78Smr domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A813KVN0_POLGL1.180e-525.82Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A813H707_POLGL1.970e-525.58Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A5J4YS53_PORPP5.030e-539.58Smr domain-containing protein n=1 Tax=Porphyridium... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002625Smr domainSMARTSM00463SMR_2coord: 337..424
e-value: 4.4E-8
score: 42.8
IPR002625Smr domainPFAMPF01713Smrcoord: 340..404
e-value: 5.8E-7
score: 29.8
IPR002625Smr domainPROSITEPS50828SMRcoord: 340..424
score: 14.734
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 165..230
e-value: 2.0E-6
score: 29.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 231..337
e-value: 1.7E-5
score: 26.6
NoneNo IPR availableGENE3D3.30.1370.110coord: 338..422
e-value: 7.5E-12
score: 47.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..436
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.619
IPR036063Smr domain superfamilySUPERFAMILY160443SMR domain-likecoord: 339..419

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:1625276..1632462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17059.1mRNA_E-siliculosus-1a_M_contig9.17059.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 1625276..1635080 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.17059.1 ID=prot_E-siliculosus-1a_M_contig9.17059.1|Name=mRNA_E-siliculosus-1a_M_contig9.17059.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=437bp
MRWLWAGALASTMGNVMASTSLDRSAAEILAFGSCGSIGSGACSSSSSSS
SRSGRAGPQHVSRISAEPATMSLTTRAPADSGDSSAMRPGREATAAGTRA
AGLPSFWAAFSPSRAGPGRALVSPLSAKADSDENGVMDKKAEFYGNSAPG
AVAPEGAEKQDEAAVEYAVGGDWEKSVQLIKAMRDSDFVPSVNAYVATIE
ACRKVGEYDHASTLLSDMNKVCLPEDLIKAYAAPHPNAPGVTQTQKVFCL
AMMMRQDKIEPFEETYRAIMGLASKEKLWQVSLLLVEHLKRNGLVPGKFV
YDEICSVLFKTGHPEMATMIFEDALGDKIEELNSFAPPELDLHNHTVSTA
LAAVRVVLLDMARKPSTRPFHDPTQELLIITGMGNNSKDGEAVIKPRVME
LLSDMGLEPSMMRNNEGCIVLQPADLEAYMARTAGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036063Smr_dom_sf
IPR011990TPR-like_helical_dom_sf
IPR002625Smr_dom