Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1049.348.1 vs. uniprot
Match:
A0A6H5KPZ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ6_9PHAE)
HSP 1 Score: 312 bits (800), Expect = 4.000e-101
Identity = 270/287 (94.08%), Postives = 271/287 (94.43%), Query Frame = 3
Query: 201 MGTCLSSPPEEPASIKRLRRSSRGSGGATRAFRNXXXXXXXXXXXXXXXDGAADLWRGGGLILADNVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGRRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCVWNGLTFSEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDEWTCHMXXXXXXXXXXXXXIQNGCRYDNVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRGGHRRVAEWIVAN 1061
MGTCLSSP EEPA+IKRLRRSSRGS GATRAFRNXXXXXX DGA DLWRG GLILADNVDLLRSIVRFVAEKQFLFFAPVSRAWREAWG RPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGC WNGLTFSEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDEWTCHMXXXXXXXXXXXXXIQNGCRYDNVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRG HRRVAEWIVAN
Sbjct: 1 MGTCLSSPQEEPAAIKRLRRSSRGSSGATRAFRNXXXXXXGGG------DGATDLWRGSGLILADNVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGCRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCAWNGLTFSEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDEWTCHMXXXXXXXXXXXXXIQNGCRYDNVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRGSHRRVAEWIVAN 281
BLAST of mRNA_E-siliculosus-1a_F_contig1049.348.1 vs. uniprot
Match:
D7FH77_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH77_ECTSI)
HSP 1 Score: 104 bits (260), Expect = 1.280e-21
Identity = 48/93 (51.61%), Postives = 62/93 (66.67%), Query Frame = 3
Query: 393 DNVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGRRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCVWNGLT 671
+N D+L ++ FVA++ FLFF PV R WR AWG RP T T D + +QL+ F+ GL R PELCAAIARLG+++LL AR +GC W T
Sbjct: 11 NNPDILGCLISFVADESFLFFGPVCRDWRAAWGNRPTTTRIATSDLTPTQLQRGFDCGLTRTNPELCAAIARLGDVDLLELARDNGCRWGAST 103
BLAST of mRNA_E-siliculosus-1a_F_contig1049.348.1 vs. uniprot
Match:
D7FH49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH49_ECTSI)
HSP 1 Score: 106 bits (264), Expect = 1.870e-21
Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 3
Query: 396 NVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGRRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCVW 659
N+D++ + +FV +KQFLFFA VSR+WR+AWG R VTSWVT ++ QL+YSF GL RD + C AR GNL+LLR A GC W
Sbjct: 22 NMDIVHGLAQFVLDKQFLFFAAVSRSWRDAWGERATVTSWVTPHTTPFQLQYSFACGLARDGVDWCLTTARAGNLDLLRWATEQGCPW 109
BLAST of mRNA_E-siliculosus-1a_F_contig1049.348.1 vs. uniprot
Match:
A0A6H5L0J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J7_9PHAE)
HSP 1 Score: 98.2 bits (243), Expect = 6.500e-20
Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 3
Query: 399 VDLLRSIVRFVAEKQFLFFAPVSRAWREAWGRRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCVWN 662
VD++ ++ FV + Q+LFFA VSR WR+ WG+RP VT +T D+SV QL SFE GL R +C +A LG L+LLR AR GC WN
Sbjct: 7 VDIVSTVAEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRT-AAVCETVAGLGRLDLLRRARAMGCQWN 93
BLAST of mRNA_E-siliculosus-1a_F_contig1049.348.1 vs. uniprot
Match:
D7FH78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH78_ECTSI)
HSP 1 Score: 100 bits (249), Expect = 1.180e-19
Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 3
Query: 396 NVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGRRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCVWN 662
N ++L + +FV + QFLFFAPV++ WR AW +RP +T+ VT D++ SQL++SFE GLP+++ LCAA+ARLG L LL A G+GC N
Sbjct: 112 NRNILLCLAQFVPDNQFLFFAPVAKGWRAAW-QRPTITAHVTPDTTTSQLQHSFECGLPQNQTGLCAALARLGKLNLLACAVGAGCPMN 199
BLAST of mRNA_E-siliculosus-1a_F_contig1049.348.1 vs. uniprot
Match:
D7FMS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS7_ECTSI)
HSP 1 Score: 99.0 bits (245), Expect = 3.120e-19
Identity = 47/88 (53.41%), Postives = 60/88 (68.18%), Query Frame = 3
Query: 399 VDLLRSIVRFVAEKQFLFFAPVSRAWREAWGRRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCVWN 662
VD++ ++ FV + Q+LFFA VSR WR+ WG+RP VT +T D+SVSQL SFE GL R +C +A LG L+LLR AR GC WN
Sbjct: 9 VDIVSTVGEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVSQLSLSFECGLRRT-AAVCETVAGLGRLDLLRRARAMGCPWN 95
BLAST of mRNA_E-siliculosus-1a_F_contig1049.348.1 vs. uniprot
Match:
A0A6H5L0K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K8_9PHAE)
HSP 1 Score: 95.1 bits (235), Expect = 2.250e-18
Identity = 47/93 (50.54%), Postives = 59/93 (63.44%), Query Frame = 3
Query: 384 ILADNVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGRRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCVWN 662
++ NV LL + FV + Q LFFA VSR WR+ WG+RP VT +T D+SV QL SFE GL R +C +A LG L+LL+ AR GC WN
Sbjct: 20 LVTANVYLLSYLAEFVDDNQHLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRT-AAVCETVAGLGRLDLLQRARAMGCPWN 111
BLAST of mRNA_E-siliculosus-1a_F_contig1049.348.1 vs. uniprot
Match:
D7G8V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V2_ECTSI)
HSP 1 Score: 94.7 bits (234), Expect = 2.380e-17
Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 3
Query: 402 DLLRSIVRFVAEKQFLFFAPVSRAWREAWGRRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCVWNGLT 671
D+ +V FV +QFLFFA V RAW+EAWG+RP T VTED++V+QL +F+ GL ++C ++A+LG L+LL+ AR GC WN +T
Sbjct: 10 DVASCLVEFVDYEQFLFFAGVCRAWKEAWGQRPPTTRAVTEDTTVAQLSQNFQCGLSLI-ADVCTSVAKLGRLDLLQCARRHGCAWNEVT 98
BLAST of mRNA_E-siliculosus-1a_F_contig1049.348.1 vs. uniprot
Match:
D7G8W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W5_ECTSI)
HSP 1 Score: 78.6 bits (192), Expect = 1.150e-12
Identity = 46/90 (51.11%), Postives = 55/90 (61.11%), Query Frame = 3
Query: 420 VRFVAEKQFLFFAPVSRAWREAWGRRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGS-GCVWNGLTFSEAA 686
+ FV +Q+LFFA VSR WR+AW RP T VT D+ V QL SFE GL R R +C IA LG L+LL SAR C W+ T S A+
Sbjct: 1 MEFVGGEQYLFFAGVSRTWRDAWEGRPTTTRAVTADTGVPQLSQSFECGLAR-RSTVCQDIAALGRLDLLVSAREEYECPWDEDTCSYAS 89
BLAST of mRNA_E-siliculosus-1a_F_contig1049.348.1 vs. uniprot
Match:
A0A6H5K3L5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3L5_9PHAE)
HSP 1 Score: 79.3 bits (194), Expect = 2.410e-12
Identity = 41/84 (48.81%), Postives = 51/84 (60.71%), Query Frame = 3
Query: 426 FVAEKQFLFFAPVSRAWREAWGRRPAVTSWVTEDSSVSQLRYSFERGLPRD--RPELCAAIARLGNLELLRSARGSGCVWNGLT 671
FV + Q+LF APV +A+R AWG R VT V D+SV QL Y E GLP + +C A AR G L+LL+ A+GS C W T
Sbjct: 7 FVDQDQYLFIAPVLKAFRRAWGPRATVTRPVVADTSVRQLTYCLELGLPSSIRQATICNAAARFGRLDLLKLAQGSACGWTPAT 90
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1049.348.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 14
0 1 Expect = 4.00e-101 / Id = 94.08 Expect = 1.28e-21 / Id = 51.61 Expect = 1.87e-21 / Id = 54.55 Expect = 6.50e-20 / Id = 52.27 Expect = 1.18e-19 / Id = 52.81 Expect = 3.12e-19 / Id = 53.41 Expect = 2.25e-18 / Id = 50.54 Expect = 2.38e-17 / Id = 50.00 Expect = 1.15e-12 / Id = 51.11 Expect = 2.41e-12 / Id = 48.81 Sequence A0A6H5KPZ6_9PHAE D7FH77_ECTSI D7FH49_ECTSI A0A6H5L0J7_9PHAE D7FH78_ECTSI D7FMS7_ECTSI A0A6H5L0K8_9PHAE D7G8V2_ECTSI D7G8W5_ECTSI A0A6H5K3L5_9PHAE Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1049.348.1
>prot_E-siliculosus-1a_F_contig1049.348.1 ID=prot_E-siliculosus-1a_F_contig1049.348.1|Name=mRNA_E-siliculosus-1a_F_contig1049.348.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=288bp
MGTCLSSPPEEPASIKRLRRSSRGSGGATRAFRNNNDNDTDDDGGGGGGD back to top mRNA from alignment at E-siliculosus-1a_F_contig1049:24270..28231+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1049.348.1 ID=mRNA_E-siliculosus-1a_F_contig1049.348.1|Name=mRNA_E-siliculosus-1a_F_contig1049.348.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3962bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1049:24270..28231+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)GCACATTCCGTGAGACCGTTTTCGGGCGGATCGGCAGCCGCGCCACAGCC
GGCAGCGTCGTGCCTTCGAGTGCGGGAGGCAGCAGGCAGCCGCGGCCAGC
CCTGCTGCTGCTGCTGCTGCTGCGACTGTGCTAGGGGCGCGTGTTCTTCT
CTCCCCGACGGAGGAATCTCGTTCTCTCTTGTTCCCTTCCGTGTGGGCCG
ATGGGTACCTGCCTTTCCTCTCCACCGGAAGAGCCTGCCTCCATCAAGCG
GCTGAGGAGGAGCAGCAGGGGGAGCGGCGGTGCCACCCGG GTAAGTAAGA
GGATGCACGCACGCATGTTGTGTCGTATGGTGTTTGCCTGGGGGGCGAAG
GCCGGTCTGTGCTACCTATTACCACATGTGGAGCAGCTTTTCAGCCTATT
ATACTGCTGTGCTGTAGCGCATAAGCGACACGCACGCGCGCGTGTTGCGC
GATGCGCAGTGTTCTAGCGGCGATTTTGTGGAATTTATTATATCTGATCT
CATCAATACAATGGGATACTCACACACAACCAATAAACCGCCGACCTCCA
CTCTGGTTGTGTCGAACACGGCATGCCAAAGGACGTGGCCCCAATGATGA
ACACTCAGCAAACCATCTCTCTCTGTAGCTTGTACACACCTATGGCGCAG
TAGCCCCCGTTCTTGCCGATCAGACAGAGAGGTTGGAGGTTGGACACACC
TTCCAGTTCTGCCATATGCGTATGTTGCAAATGCACATACACATGCATAC
GATGCATATGCGGGCTGTCTTCGGTAAACCAACAGAACGATCGCGCTGCA
TGTGATCCATGGTGCAAGCACAGGTGTTCCAGGTCATACAATGTATGTAC
TGCTGTAGTACGTTTTCGAGGGGACGCGACGGTTGGGCAGCAAGGTCGAC
AAACACCAGACCCTACATGCAGCAGTTGAAAACTCACGAGAGGGACGGCT
GTCGTACCTCGCCCCTCTCCCGTTGTGGGAGGACTACAGCAGTTCATCTA
TATTTCACCTCTATATATTAGCAGAGGAGAATGGACACATAGCAGCATTC
TTATTTCCTTGTCATCGTGCACTGCTGTGTTGTACATAGAAGAATCCATG
GGTACCACACGCAGGTGACACAAGTGGTACGAGTGTACCAAACTTCAGGT
TGTGGGGGAAGACAGCGGTACTGCTGTATGTACCGCTGTGGGCACGAAAG
GACCTGGTCTGAACTCTGAACCTCGGCCGGAAGTTGTTCCGATCAAGCGC
CCCAGTGGCTGCAGGAGTCCAAACACACGAACGCACCAGACACCCGGATA
TACATCTAGATAGGCGGGGGGGCTTTGGAGACAGCGCCTAAGTCGTCATA
CGATGCTGTGCACTTTGATCGCATCGCCGGGAATGCGCTATAATACATGT
ATCACAGCAGTTCGACGTTAACAGCAGTAGCCCCAGGAGCCCCCCATTTA
CTCCCACATTAATTAATTTGTTCGGGATGCTTTTTTTCTGACCCTTCACG
TTTTTATGCATATGCAAACAGAGACGTAACGCCTACGGCTCGTCGCATGT
TTGCCGCTATCAGTGGTACTTCAGGTGCTGCCCTCTTCACCTTCCCCACT
GCTGTTGTGCTTCGCGGCCTCTCTTACCACCCCTAACATACCAAAAACAA
GGGCTGAAAAAATGTTACGCGCAAGGGATTACGGTCGGGATCTATGTACC
CCACTTCGACATTGTTGGCTGAACACAATAAAGCCTAGATGCTGTAATAC
GGAACATGGAGCCACTGGATCACGAAAAAGTGGTTGTTGCATTCAAACTT
GCCAACAACGGCGGCGCGCCAACGTCGTGGAGATCTCCTCCAGTTGTGGA
TGAAGGAACCATCAATGCAACCCGAACCCTACAACATCTATGGTGTCGGC
GCGTGTGCTTCGTTGTTATTACTTATAGTATTACGCTCACGGGTTCTTAT
GGAGACCATTTTTTCCGCACGCAGTAGGACTCACTCACGAAGTTCCATTT
TTTCGAGGAAGAGATCGAGAGAGGCGAGGCCAAGCGGAAAAGCGCGCGAA
ACAAGAAAGTGACTTACCCCGGAGATCTGTATTCTGCCGCGGCCACACAA
GAACCGAACCCATTTCCGCCATCTCAAAACCTGAAACGGGCTGGAACCCG
TGGATATACTACGCATGCATGCAACGCGACGTCGTACGGGGCATAGTCTG
GAGTAGTGTGGATATGCGGTATAGTGCAGGTTGTATCGACTTGGCAAACG
TTTAGTGCAGCGCACACGTATTACTGATCTTTTTCTTTTGGTTTAGGGCA
GGGCATATGCGCAATGAATGGGTCGTTGTCCTCTGCATCGACCCCCATTT
GATTCTTTCCAATCGCCATGATCCCATTTACGAGCCGTCGTTTGGATGTT
CAAATACTTACACTACGGCCATCGATCGATGCCGTTCAAACAAAACGAGC
TTGGTCACGCGCACAAGAAGAGTTCCTTTGCGATGCATGCCTTGGTTACT
TCTTCCCTCTGGAGAAATGTTCAGCTGTCCTTCCCTGACGGGGGGTCCAC
CACTAAAACACGCAAGCGCTCCCTCCCATGGACTTATTTCTGTCCTAGCC
TCGATGATGCTGCTTGTTACGCCCGCTAGTTTTTGTGGAGGCTGTGGTTC
TTACTACTTCCTGGGGTTGTGCTTCCAAAAGGCCGCAAATTAGGGTAACG
TAGGGGTTCTTGCCCGAGCTCACGAATGGTCCTCAAGTTCTCAGAGTTCG
AGTTGTTTCGAGGCTCTTAACTGCTTACTACCAAGTCCTTACAAAGCGCG
GGCGCTAACTAACTGCTGCCGCCGCCGCCGCCGCCGCCGCTGTCGCTGCT
GCTGTGGGACGCGCGAAAAAAAAATGCAGGCGTTCAGGAACAACAACGAC
AACGACACCGACGACGACGGCGGCGGCGGCGGCGGCGACGGGGCTGCGGA
CCTCTGGCGGGGGGGCGGTCTCATCCTGGCCGACAACGTGGACCTCCTGC
GGAGCATCGTCCGCTTCGTGGCCGAGAAGCAGTTCCTCTTCTTTGCACCG
GTCTCCAGGGCCTGGAGGGAGGCCTGGGGCCGTCGCCCGGCGGTGACGAG
CTGGGTCACCGAGGACTCGTCCGTGTCCCAGCTGAGGTACAGCTTCGAGC
GGGGGCTCCCGCGGGACCGGCCGGAGCTGTGCGCCGCCATCGCGCGGCTC
GGCAACCTCGAGCTCCTTCGCTCGGCGAGGGGCAGCGGGTGCGTCTGGAA
CGGGCTGACGTTCTCGGAGGCGGCGCGGCGGGGGGACCTGGCGTTCCTCC
AGTGGCTCAAGTCCAGCGGGTGCAGGTGGGACAAGTTCTCGGCCATCGCC
GCGGCGGGGGGGGGACACCTCCACGTGCTCAAGTGGCTGAGGAAGAGCGG
CGTCGGGTGGGACGACGACGAGTGGACCTGCCACATGGCGGCGGCGGGGG
GACACGTGCACGTCCTGCGGTGGGCCATACAGAACGGGTGCCGGTACGAC
AACGTCACCTGCTGGTCGGCCGCGCACCAAGGGCACCTCGAGGCCCTCAA
GTACCTGAGAAAGATCGGCTGCGGCTGGGACAGGCAGCGATGCTTCGACG
CCGCGGTCCGCGGGGGCCACCGGCGCGTGGCGGAGTGGATCGTGGCGAAC
TGA TCGACGGCGGCAATGGTGCATGGCGGGCTCTTAAATGGATCACCGCA
AACTGATCAGCCGCATTGAATGGTGGCTCTTAAGTGATCTGCGGCGGTAA
CTATTGAATGACGGCTCTTATTTGCGGATCATCGCCAACTGTTGGAAGCT
TTTTGGTAGTGAGCGGGAGAAACCGTTTCGTCTGTTCGTGCAACTTGGTT
CGTCTTGGAAAATGGGGCGGTCTAGAAACGCCTTCACGTGGAAACCCTAT
GTAAGCGTCTCCTGATAATTATCACGGAGCGGGGTCAGGCATGTACCGGC
CTTTGTTCCCAG back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1049:24270..28231+
>mRNA_E-siliculosus-1a_F_contig1049.348.1 ID=mRNA_E-siliculosus-1a_F_contig1049.348.1|Name=mRNA_E-siliculosus-1a_F_contig1049.348.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1728bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1049:24270..28231+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top