prot_E-siliculosus-1a_M_contig83.16482.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig83.16482.1
Unique Nameprot_E-siliculosus-1a_M_contig83.16482.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length945
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: D7FT49_ECTSI (Translesion synthesis DNA polymerase eta splice variant n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT49_ECTSI)

HSP 1 Score: 1359 bits (3517), Expect = 0.000e+0
Identity = 752/873 (86.14%), Postives = 765/873 (87.63%), Query Frame = 0
Query:    1 MATSATKSSTAKIPPAAGNAWTGGSAVSAGGGRGLAPALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARAKEEFTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRPKGVSRCCRMVKPELRPVVEACMKMVRAFSVEAPRLTMLGVSAHGFADSRKDTRSIQSFFGAAPAAAALEPSSSEEVPRRGGSANSSLSAWYRRATDEGRGRRREVDEEARARPTGNALGFPKATATVAVEEEARAAGGCKRPRPPEDDAAEAGGADGALRARRDADGGGEGDRAATDCGRSSVDFWEMSAAEDERRREEGESDGEYVPAPHEEQYRRDRGREREDDEGQRKEGDDDAVPLHVVAPREMNASQICEGQGKRCREEEAAAE---PRSIDAKMVGREGDQAGVKEGRHDTVGGRAGLEERLGSSAAAAAAHAADAG----DGIGDERFQGDGGGGAEAGSRHRPLFGRGGSSGVFGDVDPAVLAELPPDIQREVWMQQG 866
            MATSATKSST+KIPPAAG+ WTGGSAVSAGGGRGLAPALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGG      XXXX   DGK AS  EGSKAPPAASP EDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDD ASKEQQLADGVSWWAR +E FTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGV AHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPV ARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQ                                   APRLTMLGVSAHGFADSRKDTRSIQSFFGAAPAAAALEPSSSEEVPRRGG+AN S SAWY RATD GRGRR  VDE  RARPTGNALGFPKATA VAVEEEARAAGGCKRPRPPE+DAAEAGGADGALRA RD DGGGEGDRAATD G SSVDFWEMSAA         E  G++ PA  E QYRRDRGREREDDEG RKEGDDDAVPLHVVAPRE+N +QICEGQGKRCREEEAAA    PRS+DA+M GREGD AGVKEGRHDTV GRAGLEERLG S A AA           DGIGDERF GDGGGGAEA S HRPLFGRGGSSGVFG+VDPAVLAELPPDIQRE+WMQQG
Sbjct:    1 MATSATKSSTSKIPPAAGSGWTGGSAVSAGGGRGLAPALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGDQPQQHXXXXE--DGKGASAEEGSKAPPAASPMEDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDHASKEQQLADGVSWWARTQEAFTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGV-AHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVNARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQ-----------------------------------APRLTMLGVSAHGFADSRKDTRSIQSFFGAAPAAAALEPSSSEEVPRRGGTANLSSSAWYPRATDAGRGRRCGVDEAGRARPTGNALGFPKATAAVAVEEEARAAGGCKRPRPPEEDAAEAGGADGALRAGRDVDGGGEGDRAATDGGSSSVDFWEMSAAXXXXXXXXXEGGGDHAPALREGQYRRDRGREREDDEGYRKEGDDDAVPLHVVAPREINTAQICEGQGKRCREEEAAAAAAAPRSVDARMAGREGDPAGVKEGRHDTVVGRAGLEERLGLSPATAAXXXXXXXXXXXDGIGDERFHGDGGGGAEASSGHRPLFGRGGSSGVFGEVDPAVLAELPPDIQREIWMQQG 835          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: A0A6H5K6B1_9PHAE (UmuC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6B1_9PHAE)

HSP 1 Score: 924 bits (2388), Expect = 0.000e+0
Identity = 515/603 (85.41%), Postives = 528/603 (87.56%), Query Frame = 0
Query:  324 LAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRPKGVSRCCRMVKPELRPVVEACMKMVRAFSVEAPRLTMLGVSAHGFADSRKDTRSIQSFFGAAPAAAALEPSSSEEVPRRGGSANSSLSAWYRRATDEGRGRRREVDEEARARPTGNALGFPKATATVAVEEEARAAGGCKRPRPPEDDAAEAGGADGALRARRDADGGGEGDRAATDCGRSSVDFWEMSAAEDERRREEGESDGEYVPAPHEEQYRRDRGREREDDEGQRKEGDDDAVPLHVVAPREMNASQICEGQGKRCREEEAA--------AEPRSIDAKMVGREGDQAGVKEGRHDTVGGRAGLEERLGSSAAAAAAHAADA---GDGIGDERFQGDGGGGAEAGSRHRPLFGRGGSSGVFGDVDPAVLAELPPDIQREVWMQQGGQGAASTGQLQLRFSPAGKATAGGSSAGXXXXXXXXRGGAPQQRRGRGS 915
            +AHNKLLAKLCSNMHKPNAQTVLPLDKVE VFHTLPV RVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGK KLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGR KGVSRCCRMVKPELRPVVEACMKMVRA+S  APRLTMLGVSAHGFADSRKDTRSIQSFFGAAPAA ALE SSSEEVPRRGG AN S SAWYRRATDEGRGRRR VDE ARARPTGNALGFPK TA  A  EEARAAGG KRPRPPED+AAEAG  DG LRA R+ D G E DRAATD GRSSVDFW MSAAEDERRREEGE D  Y PAP + QYRRDRGREREDDEGQRKEGDDDAVPLHVV PRE+N SQIC+GQGKR RE            AEPRS+DA+MVGREGDQAGV+EGRHDTVGGRAGLEERLGSSAA A           DGIGDERF GDGGGG +  SRHRPLFGRGGSSGVFGD+DPAVLAELPPDIQRE+WMQQGGQ  AS GQLQLRFSPAGKATAGGS AG    XXX RGGAPQQRRGRGS
Sbjct:   61 VAHNKLLAKLCSNMHKPNAQTVLPLDKVEAVFHTLPVGRVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKAKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRSKGVSRCCRMVKPELRPVVEACMKMVRAYS--APRLTMLGVSAHGFADSRKDTRSIQSFFGAAPAAVALESSSSEEVPRRGGIANPSSSAWYRRATDEGRGRRRGVDEAARARPTGNALGFPKRTA--AAMEEARAAGGYKRPRPPEDEAAEAG-RDGTLRAGRNVDSGRESDRAATDDGRSSVDFWAMSAAEDERRREEGEGDEGYAPAPRDGQYRRDRGREREDDEGQRKEGDDDAVPLHVVTPREINTSQICQGQGKRYREXXXXXXXXXXXXAEPRSVDARMVGREGDQAGVQEGRHDTVGGRAGLEERLGSSAATAXXXXXXXXXXADGIGDERFHGDGGGGVDVNSRHRPLFGRGGSSGVFGDIDPAVLAELPPDIQREIWMQQGGQEGASAGQLQLRFSPAGKATAGGSFAGRGGGXXXSRGGAPQQRRGRGS 658          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: A0A6H5LJJ9_9PHAE (UmuC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJJ9_9PHAE)

HSP 1 Score: 555 bits (1430), Expect = 6.460e-189
Identity = 307/321 (95.64%), Postives = 309/321 (96.26%), Query Frame = 0
Query:    1 MATSATKSSTAKIPPAAGNAWTGGSAVSAGGGRGLAPALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARAKEEFTRDQELLSCGAAVVSRLRAAVRSELGYSCTA 321
            MATSATKSS AKI PAAGNAWTGGSAVSAGGGRGLAPALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDM PDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPEL+LVQVPTRNGKADIS YRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSES GXXXXXXXXXXXX  GK  STAEG+KAPPAASPREDG VSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWAR KE FTRDQELLSCGAAVVSRLRAAVRSELGYSCTA
Sbjct:    1 MATSATKSSAAKISPAAGNAWTGGSAVSAGGGRGLAPALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMEPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELALVQVPTRNGKADISLYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESSGXXXXXXXXXXXX--GKGTSTAEGNKAPPAASPREDGGVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARTKEAFTRDQELLSCGAAVVSRLRAAVRSELGYSCTA 319          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: A0A8J9S903_9CHLO (DNA polymerase eta n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S903_9CHLO)

HSP 1 Score: 298 bits (762), Expect = 2.710e-85
Identity = 187/506 (36.96%), Postives = 266/506 (52.57%), Query Frame = 0
Query:   44 RVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARAKEEFTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRPKG-VSRCCRMVKPELRPVVEACMKMVRAFSVEAP--RLTMLGVSAHGFADSRKDTRSIQSFF 546
            R IAH+D+DAFY Q+E  +  +L G+P  VVQY   N ++  + P++ R+   S  S+IAV YEAR  GVKRGM+  DARK CP+L+LVQVP  +GKAD++ YR  G++V+ +L R    L+  E+ASIDE Y+D++  A   +++   H                                PP     E                           HV G   + A++        +WW R    +   Q LL+CGAAVV+ LRAAV  ELG+SC+AG+ AHNK+LAKL S MHKP+ QTV+ LD V  +   LP+ ++R  GGKFG ++M  LG+ST GE+AAV    L+ V G ++       S  I  + VK R  PKS+ C KTF G T L  F  + +WL EL+ EL  R+   +E   +TP  LTV        G   G VSR C++ +PE  P+    +K+++ ++ E P   +T L ++A  F+ +     +I  F 
Sbjct:   10 RCIAHVDLDAFYVQVELKQHPSLIGKPTAVVQY-NPNGNLSTLRPEEERIFNRSNGSLIAVGYEARAKGVKRGMRGDDARKACPDLNLVQVPVAHGKADLTLYRACGKQVLGILAR----LSIAERASIDECYLDISEEAKKRMAACSGH--------------------------------PPLPVNLEQ-------------------------VHVCGEEGEGAAE--------AWWNRPVGAWGPGQRLLACGAAVVAELRAAVSRELGFSCSAGI-AHNKILAKLASGMHKPSQQTVVTLDCVPGLMAALPISKLRQLGGKFGEEVMAALGISTVGELAAVPLRRLEAVCGQDDAMWLHRLSRGIDDEEVKERQLPKSISCGKTFRGHTALKDFPAVHKWLGELASELEERISADREENERTPGLLTVGMWGEGGPGTSGGSVSRSCQLRRPESAPMAADALKLIKRWAAERPGWAITSLYMTASNFSSAPTGASTITRFL 444          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: I0YLK6_COCSC (DNA/RNA polymerase (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YLK6_COCSC)

HSP 1 Score: 260 bits (664), Expect = 6.670e-74
Identity = 183/507 (36.09%), Postives = 260/507 (51.28%), Query Frame = 0
Query:   74 VQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARAKEEFTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRPKG-VSRCCRMVKPELRPVVEACMKMVRAFSVEAP--RLTMLGVSAHGFADSRKDTRSIQSFFG--AAPAAAALEPSSSEEV-PRRGGSANSSL 574
            +QY   N D+  + PD+ R+   S  S+IAV YEAR  GVKRGM+  DARKVCP+L+LVQVP  +GKAD++ YR +G++V+ +L R    L+  E+ASIDE Y+D+T  A   L++  +H                                PP   P   GEV        GEGG  A                             WW R    +   Q LL+CGAAVV+ LRAAVR ELGYSC+AG+ AHNK+LAKL S MHKP+ QT++ LD V  +   LP+ ++R  GGKFG ++M  L ++T GE++AV    L+ V    +       S  I  + VK R  P+S+ C KTF G T L +F  + +WL EL  EL  R+   +    + P  LTV        G   G VSR C++ +PE +P+ E  +K+++ ++ + P   +T L ++A  F  +   + +I  F    +AP   +  PS S    P R G+ ++ L
Sbjct:    4 LQY-NPNGDLSTLRPDEERIFNSSNGSLIAVGYEARAKGVKRGMRGDDARKVCPDLNLVQVPVAHGKADLTLYRASGKQVLNILAR----LSVAERASIDECYLDITEEAKRRLAASSAH--------------------------------PPL--PINVGEVH-------GEGGTEA-----------------------------WWHRPVGAWGPGQRLLACGAAVVAELRAAVRRELGYSCSAGI-AHNKILAKLASGMHKPSQQTLVTLDCVPGLMAGLPIPKLRQLGGKFGEEIMTALNITTVGELSAVPLRRLEAVCSQADALWLHRLSRGIDDEEVKERQLPQSISCGKTFRGHTALKAFPAVHKWLGELGDELEERITADRADNERVPRLLTVGMWGEGGPGTSGGSVSRSCQLRRPESQPMAEDGLKLIKRWASDRPGWAITSLYMTASNFQAAPTGSSTITRFLKPKSAPGQQSPPPSGSTAAQPHRSGALDAPL 434          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: A0A2P6TXE9_CHLSO (DNA polymerase eta isoform C n=3 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TXE9_CHLSO)

HSP 1 Score: 277 bits (708), Expect = 9.930e-74
Identity = 168/427 (39.34%), Postives = 231/427 (54.10%), Query Frame = 0
Query:   54 FYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARAKEEFTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAA 480
            FYA +EQ R+ +L G+PV VVQY      ++   PD+NR++  S  S+IAVSYEAR  GVKR M+  DARK CP++ LVQVPT +GKAD++ YR  G++V+ +L R G A    E+ASIDE Y+D+T  A   L + G                                  PP   P    +V                       HV+G            AD  SWW R   E+   + LL+C AA V+ LR AVR ELGY+C+AG+ AH KL+AKLCS +HKP  QTVLP   V  +   LPV ++RG GGKFG ++  +LG++T GE+AAV    L+   GD++    +  +  +  D V+ R+ PKS+ C KTF G+T L S   + +WL EL+ EL  RL +++E   + P  LTV+ A+
Sbjct: 1912 FYAAVEQQRNPSLRGKPVGVVQYNPYG-SLETRGPDENRLMNDSNGSLIAVSYEARAHGVKRNMRGDDARKACPDIQLVQVPTAHGKADLTLYRSEGKKVLQILSRLGIA----ERASIDECYLDLTAEAQRRLEACGG--------------------------------VPPL--PMHPDQV-----------------------HVSGA-----------ADAASWWQRPPHEWQPGERLLACAAAAVAELRQAVREELGYTCSAGI-AHTKLMAKLCSGLHKPAQQTVLPASGVPDLLAPLPVSKLRGLGGKFGEQVCSELGITTVGELAAVPLPRLESAFGDKDAQWLYAVARGVTDDAVQERTLPKSLNCGKTFRGRTSLRSMEAVHKWLLELAGELSERLEQEREDNNRVPQLLTVNLAS 2264          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: UPI001FB57A0D (DNA polymerase eta n=1 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB57A0D)

HSP 1 Score: 266 bits (681), Expect = 2.000e-73
Identity = 179/503 (35.59%), Postives = 254/503 (50.50%), Query Frame = 0
Query:   44 RVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARAKEEFTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRPKGVSRCCRMVKPELRPVVEACMKMVRAFSVEA-------PRLTMLGVSAHGFADSRKDT 539
            RV+A +DMD FY Q+EQ  + AL G+P VV QY T                      IIAVSYEAR  GV R M   DA+K+CP+L + +V   +GKAD++FYR A   V+ V+ R       +E+ASIDE Y+D+T A H  L  +     E                 G   S+   S + P+A   ED  ++K+     G   W A L A        LS + +S E QL                     + GA +V  +RAAV +  G+ C+AG+ +HNK+LAKL   ++KPN QTVLPLD V  +F TLPV ++R  GGK G  + E LG+   G++     A+L++  G++ G    +    I  + VK R  PKS+GCSK FPGKT L S  +++ WL +L+ EL  RL + +E  G+   +LTV    L  K RP   SRCC +V+ E   +      ++++ +          P LT+L +SA  F D++  T
Sbjct:    7 RVVALVDMDCFYVQVEQRLNPALKGKPCVVAQYKT-----------------WKGGGIIAVSYEARAHGVTRNMWVDDAKKLCPDLQVARVRESHGKADLTFYREASVEVIEVMSR----FAVIERASIDEAYMDLTAAVHRRLKDMNDKQVE-------LTLLKTTYIQGYPQSS---SGSEPSA---EDTVLNKEEQRSRGLQEWLASLPAP-------LSGEQSSAELQL---------------------TVGAVIVEEMRAAVENHTGFRCSAGI-SHNKVLAKLACGLNKPNRQTVLPLDSVTELFSTLPVGKIRNLGGKMGASITETLGIENMGDLTQFSKAQLEQHFGEKTGQWLHDLCRGIEFEAVKPRQLPKSIGCSKNFPGKTSLASKDQVQYWLHQLALELEERLTKDREANGRVAKQLTVGVRQLGDK-RPSSFSRCCALVRYEAAKISSDSFAIIKSLNTAGNHQAAWTPPLTLLHISASKFNDTQSGT 445          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: A0A7S1NH26_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NH26_9EUGL)

HSP 1 Score: 256 bits (654), Expect = 2.670e-72
Identity = 178/512 (34.77%), Postives = 260/512 (50.78%), Query Frame = 0
Query:   37 PALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARAKEEFTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRPKGVSRCCRMVKPELRPVVEACMKMVRAFSVEAPRLTM--LGVSAHGFADSRKDTRSIQSFF 546
            PAL  P  V+ H+D+DAFY Q+E  RD +L G+P+ VVQY     D++ + P + R+   S  S+IAVSYEAR FGVKR M+  +AR+ CPEL LVQVPT NGKAD++ YR AG +V+ +L R G      E+ASIDE Y+DVT    AL  +   H                                      R    ++ ++    G  G            VAG                +W++     ++   ELL+ GAAVV+ LR  V++ELGYSC+AG+ AHNKLLAKLCS +HKP  QT+LP   V+ +   L + ++R  GGK G ++ + LG+ T G++ AV    L+ + G E G      +     D V+ R+ PKS+GC KTF  +  + +  +++ WL ++++EL  R+   +E   + P  + V  ++         VSR C M    +  +  A + +VR +  E    T+  L +SA  F  S     SI +FF
Sbjct:   14 PAL--PRAVVVHVDLDAFYCQVEVGRDPSLQGQPIAVVQYNPFG-DLRTILPSEPRIFNDSNGSLIAVSYEARAFGVKRNMRGDEARRQCPELQLVQVPTANGKADLTIYREAGAQVIDILARGG----VCERASIDEAYLDVTE--EALRRARRDHG-------------------------------------RPVLPLNPEQCRVYGPDG------------VAGCE--------------AWFSTPDWAWSDADELLAHGAAVVAELRHVVQTELGYSCSAGI-AHNKLLAKLCSGLHKPQQQTILPESAVQRLLDPLMIAKLRSLGGKLGQQVAQVLGIETVGQLRAVPETRLRTLFGPETGPWLHRMARGQSSDRVQQRTLPKSLGCGKTFRAQNAIRTLQDVQYWLQQIARELAERIGSDRERNQRVPQTMGVGLSS-----HGDHVSRSCAMPGLSVESIASAGLALVRRWVAERAEWTVTDLYLSACNFR-SIAACPSIATFF 446          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: A0A3P8ZR68_ESOLU (Polymerase (DNA directed), eta n=3 Tax=Esox lucius TaxID=8010 RepID=A0A3P8ZR68_ESOLU)

HSP 1 Score: 260 bits (665), Expect = 1.310e-71
Identity = 184/571 (32.22%), Postives = 276/571 (48.34%), Query Frame = 0
Query:   44 RVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSD-----DDASKEQQLADGVSWWARAKEEFTRDQEL-LSCGAAVVSRLRAAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRPKGVSRCCRMVKPELRPVVEACMKMVRAFSVEA-------PRLTMLGVSAHGFADSRK-DTRSIQSFFGA--APAAAALEPSS---SEEVPRRGGSANSSLSAWYRRATDEGRGRRREVDEE 595
            RV+A +DMD FY Q+EQ  + AL   P VV QY T                      IIAVSYEAR +GV R M A DA+K+CP+L + +V    GKAD++ YR A   V+ V+ R       +E+ASIDE Y+D+T A    L SL                                           D ++ K                   TTHV G  +     ++++ ++Q + G+  W  +        EL L+ GA +V  +RAAV    G+ C+AG+ +HNK+LAKL   ++KPN QT+LPLD +  +F++LP+ ++R  GGK G  + E L V   GE+     A+L++  GD+ G   ++    I  +PVK R  PKS+GCSK FPGKT L +  +++ WL +L+ EL  RL + +E  G+   +LTV    L  K +P   SRCC + + +   +      ++++ +          P LT+L +SA  F D+       I  F         A+ +PSS   ++  P+R GS    + + +RRA ++ R R+   DEE
Sbjct:    7 RVVALVDMDCFYVQVEQRLNPALKNTPCVVAQYKT-----------------WKGGGIIAVSYEARAYGVTRNMWADDAKKLCPDLQVARVRESRGKADLTHYRDASVEVIEVMSR----FAVIERASIDEAYMDLTSAVQQRLKSLTDQQI--------------------------------------DPQLLK-------------------TTHVQGYPEPPPHHEESAPDEQRSKGLQQWLCSVSGVDGCAELQLAVGAVIVEEMRAAVEEHTGFRCSAGI-SHNKVLAKLACGLNKPNRQTILPLDSIPELFNSLPISKIRNLGGKLGASITEMLEVENMGELTRFSQAQLEQHFGDKTGQWLYDLCRGIDFEPVKPRQLPKSIGCSKNFPGKTSLVTRDQVQHWLYQLALELQERLTKDREMNGRVAKQLTVGIRQLGDK-KPSSFSRCCALARYDATKISSDSFAIIKSLNTAGNHQAAWTPPLTLLHISASKFQDAPSAGVGGIAGFLSGDGTSTQASTQPSSGSPTDSTPKRPGS----IQSLFRRAAEKQRERKEGGDEE 493          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: A0A7J7PJW7_9CHLO (UmuC domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PJW7_9CHLO)

HSP 1 Score: 262 bits (669), Expect = 2.950e-71
Identity = 179/476 (37.61%), Postives = 251/476 (52.73%), Query Frame = 0
Query:   43 LRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARAKEEFTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAW-EKSNAICR------------------------------------DPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAAL 481
            +RV+AH+D+DAFY Q+E  R+ +L G PVVVVQY     D++ + P DNR+   S  SIIAVSYEAR  GVKR M A  A+K+CPEL++VQVP  +GKADI  YR AG  V+ VL  + GA+   E+AS+DE Y+DVT  A  LL++                                      AA     G+ + +  E     GW     A A    AG+S              +WW+R ++ +T+D+ LL+ GA VV++LRAAV  +LG+SC+AG+ AH K+LAKL S ++KP  QT++P   V  +   LP+ ++R  GGKFG ++M+ LGVST GE+AAV    L+ ++G E    AW ++   + R                                    + VK R+ PKS+ C KTF G + LT  + +  WL +L+ EL  RL   +    +TPS+LTVS   L
Sbjct:    1 MRVLAHVDLDAFYTQVEVKRNPSLKGTPVVVVQYNPYG-DLRTVKPSDNRLFPDSNGSIIAVSYEARAHGVKRNMMAQAAKKLCPELNIVQVPVAHGKADIQIYRDAGAAVIGVL--SSGAVC--ERASVDEAYLDVTAGAQQLLAA--------------------------------------AAXXXXXGDSAAESIE-----GWHV---ADAEPRTAGVS--------------AWWSRPRDSWTQDEALLAAGAVVVAQLRAAVAQQLGFSCSAGI-AHTKILAKLGSGLNKPAQQTLVPAAAVPGLLGPLPLPKLRQLGGKFGEEVMQGLGVSTVGELAAVPLPRLEALVGLENA--AWLQRLAQLSRCSTLPNAAGCGETLPAASTPDTPGATVHTALRGKDDEEVKPRTLPKSISCGKTFRGGSALTGLTAVHSWLQQLATELQERLEADRRDHQRTPSQLTVSVDTL 408          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT49_ECTSI0.000e+086.14Translesion synthesis DNA polymerase eta splice va... [more]
A0A6H5K6B1_9PHAE0.000e+085.41UmuC domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5LJJ9_9PHAE6.460e-18995.64UmuC domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A8J9S903_9CHLO2.710e-8536.96DNA polymerase eta n=1 Tax=Coccomyxa sp. Obi TaxID... [more]
I0YLK6_COCSC6.670e-7436.09DNA/RNA polymerase (Fragment) n=1 Tax=Coccomyxa su... [more]
A0A2P6TXE9_CHLSO9.930e-7439.34DNA polymerase eta isoform C n=3 Tax=Chlorella sor... [more]
UPI001FB57A0D2.000e-7335.59DNA polymerase eta n=1 Tax=Mugil cephalus TaxID=48... [more]
A0A7S1NH26_9EUGL2.670e-7234.77Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A3P8ZR68_ESOLU1.310e-7132.22Polymerase (DNA directed), eta n=3 Tax=Esox lucius... [more]
A0A7J7PJW7_9CHLO2.950e-7137.61UmuC domain-containing protein n=1 Tax=Scenedesmus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017961DNA polymerase, Y-family, little finger domainPFAMPF11799IMS_Ccoord: 417..541
e-value: 2.7E-12
score: 47.4
IPR036775DNA polymerase, Y-family, little finger domain superfamilyGENE3D3.30.1490.100coord: 418..534
e-value: 2.2E-25
score: 91.3
IPR036775DNA polymerase, Y-family, little finger domain superfamilySUPERFAMILY100879Lesion bypass DNA polymerase (Y-family), little finger domaincoord: 424..533
IPR025527HUWE1/Rev1, ubiquitin binding regionPFAMPF14377UBMcoord: 841..866
e-value: 6.4E-6
score: 25.4
IPR001126UmuC domainPFAMPF00817IMScoord: 49..336
e-value: 2.9E-40
score: 137.7
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 46..367
score: 30.741
NoneNo IPR availableGENE3D1.10.150.20coord: 360..417
e-value: 8.0E-7
score: 30.8
NoneNo IPR availableGENE3D2.30.40.20coord: 53..138
e-value: 7.1E-21
score: 75.6
NoneNo IPR availablePANTHERPTHR45873:SF1DNA POLYMERASE ETAcoord: 34..943
NoneNo IPR availablePANTHERPTHR45873FAMILY NOT NAMEDcoord: 34..943
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 36..391

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig83contigE-siliculosus-1a_M_contig83:356295..363520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig83.16482.1mRNA_E-siliculosus-1a_M_contig83.16482.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig83 355890..363520 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig83.16482.1 ID=prot_E-siliculosus-1a_M_contig83.16482.1|Name=mRNA_E-siliculosus-1a_M_contig83.16482.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=945bp
MATSATKSSTAKIPPAAGNAWTGGSAVSAGGGRGLAPALKEPLRVIAHID
MDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASS
IIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAG
ERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGD
QQQQHRHQQQDEDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGW
TAVLSATATTHVAGLSDDDASKEQQLADGVSWWARAKEEFTRDQELLSCG
AAVVSRLRAAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDK
VEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGD
EEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLS
ELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRPKGVSRCCRMVKPE
LRPVVEACMKMVRAFSVEAPRLTMLGVSAHGFADSRKDTRSIQSFFGAAP
AAAALEPSSSEEVPRRGGSANSSLSAWYRRATDEGRGRRREVDEEARARP
TGNALGFPKATATVAVEEEARAAGGCKRPRPPEDDAAEAGGADGALRARR
DADGGGEGDRAATDCGRSSVDFWEMSAAEDERRREEGESDGEYVPAPHEE
QYRRDRGREREDDEGQRKEGDDDAVPLHVVAPREMNASQICEGQGKRCRE
EEAAAEPRSIDAKMVGREGDQAGVKEGRHDTVGGRAGLEERLGSSAAAAA
AHAADAGDGIGDERFQGDGGGGAEAGSRHRPLFGRGGSSGVFGDVDPAVL
AELPPDIQREVWMQQGGQGAASTGQLQLRFSPAGKATAGGSSAGRGGGGR
GSRGGAPQQRRGRGSGRGVGRRGRGGGSKSQHGSGSISSFFGRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001126UmuC
IPR025527HUWE1/Rev1_UBM
IPR036775DNA_pol_Y-fam_lit_finger_sf
IPR017961DNA_pol_Y-fam_little_finger