mRNA_E-siliculosus-1a_M_contig83.16482.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: D7FT49_ECTSI (Translesion synthesis DNA polymerase eta splice variant n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT49_ECTSI) HSP 1 Score: 1361 bits (3523), Expect = 0.000e+0 Identity = 752/873 (86.14%), Postives = 765/873 (87.63%), Query Frame = 1
Query: 406 MATSATKSSTAKIPPAAGNAWTGGSAVSAGGGRGLAPALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARAKEEFTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRPKGVSRCCRMVKPELRPVVEACMKMVRAFSVEAPRLTMLGVSAHGFADSRKDTRSIQSFFGAAPAAAALEPSSSEEVPRRGGSANSSLSAWYRRATDEGRGRRREVDEEARARPTGNALGFPKATATVAVEEEARAAGGCKRPRPPEDDAAEAGGADGALRARRDADGGGEGDRAATDCGRSSVDFWEMSAAEDERRREEGESDGEYVPAPHEEQYRRDRGREREDDEGQRKEGDDDAVPLHVVAPREMNASQICEGQGKRCREEEAAAE---PRSIDAKMVGREGDQAGVKEGRHDTVGGRAGLEERLGSSAAAAAAHAADAG----DGIGDERFQGDGGGGAEAGSRHRPLFGRGGSSGVFGDVDPAVLAELPPDIQREVWMQQG 3003
MATSATKSST+KIPPAAG+ WTGGSAVSAGGGRGLAPALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGG XXXX DGK AS EGSKAPPAASP EDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDD ASKEQQLADGVSWWAR +E FTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGV AHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPV ARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQ APRLTMLGVSAHGFADSRKDTRSIQSFFGAAPAAAALEPSSSEEVPRRGG+AN S SAWY RATD GRGRR VDE RARPTGNALGFPKATA VAVEEEARAAGGCKRPRPPE+DAAEAGGADGALRA RD DGGGEGDRAATD G SSVDFWEMSAA E G++ PA E QYRRDRGREREDDEG RKEGDDDAVPLHVVAPRE+N +QICEGQGKRCREEEAAA PRS+DA+M GREGD AGVKEGRHDTV GRAGLEERLG S A AA DGIGDERF GDGGGGAEA S HRPLFGRGGSSGVFG+VDPAVLAELPPDIQRE+WMQQG
Sbjct: 1 MATSATKSSTSKIPPAAGSGWTGGSAVSAGGGRGLAPALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGDQPQQHXXXXE--DGKGASAEEGSKAPPAASPMEDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDHASKEQQLADGVSWWARTQEAFTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGV-AHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVNARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQ-----------------------------------APRLTMLGVSAHGFADSRKDTRSIQSFFGAAPAAAALEPSSSEEVPRRGGTANLSSSAWYPRATDAGRGRRCGVDEAGRARPTGNALGFPKATAAVAVEEEARAAGGCKRPRPPEEDAAEAGGADGALRAGRDVDGGGEGDRAATDGGSSSVDFWEMSAAXXXXXXXXXEGGGDHAPALREGQYRRDRGREREDDEGYRKEGDDDAVPLHVVAPREINTAQICEGQGKRCREEEAAAAAAAPRSVDARMAGREGDPAGVKEGRHDTVVGRAGLEERLGLSPATAAXXXXXXXXXXXDGIGDERFHGDGGGGAEASSGHRPLFGRGGSSGVFGEVDPAVLAELPPDIQREIWMQQG 835
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: A0A6H5K6B1_9PHAE (UmuC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6B1_9PHAE) HSP 1 Score: 924 bits (2388), Expect = 0.000e+0 Identity = 515/603 (85.41%), Postives = 528/603 (87.56%), Query Frame = 1
Query: 1375 LAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRPKGVSRCCRMVKPELRPVVEACMKMVRAFSVEAPRLTMLGVSAHGFADSRKDTRSIQSFFGAAPAAAALEPSSSEEVPRRGGSANSSLSAWYRRATDEGRGRRREVDEEARARPTGNALGFPKATATVAVEEEARAAGGCKRPRPPEDDAAEAGGADGALRARRDADGGGEGDRAATDCGRSSVDFWEMSAAEDERRREEGESDGEYVPAPHEEQYRRDRGREREDDEGQRKEGDDDAVPLHVVAPREMNASQICEGQGKRCREEEAA--------AEPRSIDAKMVGREGDQAGVKEGRHDTVGGRAGLEERLGSSAAAAAAHAADA---GDGIGDERFQGDGGGGAEAGSRHRPLFGRGGSSGVFGDVDPAVLAELPPDIQREVWMQQGGQGAASTGQLQLRFSPAGKATAGGSSAGXXXXXXXXRGGAPQQRRGRGS 3150
+AHNKLLAKLCSNMHKPNAQTVLPLDKVE VFHTLPV RVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGK KLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGR KGVSRCCRMVKPELRPVVEACMKMVRA+S APRLTMLGVSAHGFADSRKDTRSIQSFFGAAPAA ALE SSSEEVPRRGG AN S SAWYRRATDEGRGRRR VDE ARARPTGNALGFPK TA A EEARAAGG KRPRPPED+AAEAG DG LRA R+ D G E DRAATD GRSSVDFW MSAAEDERRREEGE D Y PAP + QYRRDRGREREDDEGQRKEGDDDAVPLHVV PRE+N SQIC+GQGKR RE AEPRS+DA+MVGREGDQAGV+EGRHDTVGGRAGLEERLGSSAA A DGIGDERF GDGGGG + SRHRPLFGRGGSSGVFGD+DPAVLAELPPDIQRE+WMQQGGQ AS GQLQLRFSPAGKATAGGS AG XXX RGGAPQQRRGRGS
Sbjct: 61 VAHNKLLAKLCSNMHKPNAQTVLPLDKVEAVFHTLPVGRVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKAKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRSKGVSRCCRMVKPELRPVVEACMKMVRAYS--APRLTMLGVSAHGFADSRKDTRSIQSFFGAAPAAVALESSSSEEVPRRGGIANPSSSAWYRRATDEGRGRRRGVDEAARARPTGNALGFPKRTA--AAMEEARAAGGYKRPRPPEDEAAEAG-RDGTLRAGRNVDSGRESDRAATDDGRSSVDFWAMSAAEDERRREEGEGDEGYAPAPRDGQYRRDRGREREDDEGQRKEGDDDAVPLHVVTPREINTSQICQGQGKRYREXXXXXXXXXXXXAEPRSVDARMVGREGDQAGVQEGRHDTVGGRAGLEERLGSSAATAXXXXXXXXXXADGIGDERFHGDGGGGVDVNSRHRPLFGRGGSSGVFGDIDPAVLAELPPDIQREIWMQQGGQEGASAGQLQLRFSPAGKATAGGSFAGRGGGXXXSRGGAPQQRRGRGS 658
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: A0A6H5LJJ9_9PHAE (UmuC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJJ9_9PHAE) HSP 1 Score: 557 bits (1436), Expect = 3.840e-188 Identity = 307/321 (95.64%), Postives = 309/321 (96.26%), Query Frame = 1
Query: 406 MATSATKSSTAKIPPAAGNAWTGGSAVSAGGGRGLAPALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARAKEEFTRDQELLSCGAAVVSRLRAAVRSELGYSCTA 1368
MATSATKSS AKI PAAGNAWTGGSAVSAGGGRGLAPALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDM PDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPEL+LVQVPTRNGKADIS YRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSES GXXXXXXXXXXXX GK STAEG+KAPPAASPREDG VSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWAR KE FTRDQELLSCGAAVVSRLRAAVRSELGYSCTA
Sbjct: 1 MATSATKSSAAKISPAAGNAWTGGSAVSAGGGRGLAPALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMEPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELALVQVPTRNGKADISLYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESSGXXXXXXXXXXXX--GKGTSTAEGNKAPPAASPREDGGVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARTKEAFTRDQELLSCGAAVVSRLRAAVRSELGYSCTA 319
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: A0A8J9S903_9CHLO (DNA polymerase eta n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S903_9CHLO) HSP 1 Score: 298 bits (762), Expect = 2.050e-84 Identity = 187/506 (36.96%), Postives = 266/506 (52.57%), Query Frame = 1
Query: 535 RVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARAKEEFTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRPKG-VSRCCRMVKPELRPVVEACMKMVRAFSVEAP--RLTMLGVSAHGFADSRKDTRSIQSFF 2043
R IAH+D+DAFY Q+E + +L G+P VVQY N ++ + P++ R+ S S+IAV YEAR GVKRGM+ DARK CP+L+LVQVP +GKAD++ YR G++V+ +L R L+ E+ASIDE Y+D++ A +++ H PP E HV G + A++ +WW R + Q LL+CGAAVV+ LRAAV ELG+SC+AG+ AHNK+LAKL S MHKP+ QTV+ LD V + LP+ ++R GGKFG ++M LG+ST GE+AAV L+ V G ++ S I + VK R PKS+ C KTF G T L F + +WL EL+ EL R+ +E +TP LTV G G VSR C++ +PE P+ +K+++ ++ E P +T L ++A F+ + +I F
Sbjct: 10 RCIAHVDLDAFYVQVELKQHPSLIGKPTAVVQY-NPNGNLSTLRPEEERIFNRSNGSLIAVGYEARAKGVKRGMRGDDARKACPDLNLVQVPVAHGKADLTLYRACGKQVLGILAR----LSIAERASIDECYLDISEEAKKRMAACSGH--------------------------------PPLPVNLEQ-------------------------VHVCGEEGEGAAE--------AWWNRPVGAWGPGQRLLACGAAVVAELRAAVSRELGFSCSAGI-AHNKILAKLASGMHKPSQQTVVTLDCVPGLMAALPISKLRQLGGKFGEEVMAALGISTVGELAAVPLRRLEAVCGQDDAMWLHRLSRGIDDEEVKERQLPKSISCGKTFRGHTALKDFPAVHKWLGELASELEERISADREENERTPGLLTVGMWGEGGPGTSGGSVSRSCQLRRPESAPMAADALKLIKRWAAERPGWAITSLYMTASNFSSAPTGASTITRFL 444
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: I0YLK6_COCSC (DNA/RNA polymerase (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YLK6_COCSC) HSP 1 Score: 260 bits (664), Expect = 2.990e-73 Identity = 183/507 (36.09%), Postives = 260/507 (51.28%), Query Frame = 1
Query: 625 VQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARAKEEFTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRPKG-VSRCCRMVKPELRPVVEACMKMVRAFSVEAP--RLTMLGVSAHGFADSRKDTRSIQSFFG--AAPAAAALEPSSSEEV-PRRGGSANSSL 2127
+QY N D+ + PD+ R+ S S+IAV YEAR GVKRGM+ DARKVCP+L+LVQVP +GKAD++ YR +G++V+ +L R L+ E+ASIDE Y+D+T A L++ +H PP P GEV GEGG A WW R + Q LL+CGAAVV+ LRAAVR ELGYSC+AG+ AHNK+LAKL S MHKP+ QT++ LD V + LP+ ++R GGKFG ++M L ++T GE++AV L+ V + S I + VK R P+S+ C KTF G T L +F + +WL EL EL R+ + + P LTV G G VSR C++ +PE +P+ E +K+++ ++ + P +T L ++A F + + +I F +AP + PS S P R G+ ++ L
Sbjct: 4 LQY-NPNGDLSTLRPDEERIFNSSNGSLIAVGYEARAKGVKRGMRGDDARKVCPDLNLVQVPVAHGKADLTLYRASGKQVLNILAR----LSVAERASIDECYLDITEEAKRRLAASSAH--------------------------------PPL--PINVGEVH-------GEGGTEA-----------------------------WWHRPVGAWGPGQRLLACGAAVVAELRAAVRRELGYSCSAGI-AHNKILAKLASGMHKPSQQTLVTLDCVPGLMAGLPIPKLRQLGGKFGEEIMTALNITTVGELSAVPLRRLEAVCSQADALWLHRLSRGIDDEEVKERQLPQSISCGKTFRGHTALKAFPAVHKWLGELGDELEERITADRADNERVPRLLTVGMWGEGGPGTSGGSVSRSCQLRRPESQPMAEDGLKLIKRWASDRPGWAITSLYMTASNFQAAPTGSSTITRFLKPKSAPGQQSPPPSGSTAAQPHRSGALDAPL 434
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: A0A2P6TXE9_CHLSO (DNA polymerase eta isoform C n=3 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TXE9_CHLSO) HSP 1 Score: 277 bits (708), Expect = 6.730e-73 Identity = 168/427 (39.34%), Postives = 231/427 (54.10%), Query Frame = 1
Query: 565 FYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARAKEEFTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAA 1845
FYA +EQ R+ +L G+PV VVQY ++ PD+NR++ S S+IAVSYEAR GVKR M+ DARK CP++ LVQVPT +GKAD++ YR G++V+ +L R G A E+ASIDE Y+D+T A L + G PP P +V HV+G AD SWW R E+ + LL+C AA V+ LR AVR ELGY+C+AG+ AH KL+AKLCS +HKP QTVLP V + LPV ++RG GGKFG ++ +LG++T GE+AAV L+ GD++ + + + D V+ R+ PKS+ C KTF G+T L S + +WL EL+ EL RL +++E + P LTV+ A+
Sbjct: 1912 FYAAVEQQRNPSLRGKPVGVVQYNPYG-SLETRGPDENRLMNDSNGSLIAVSYEARAHGVKRNMRGDDARKACPDIQLVQVPTAHGKADLTLYRSEGKKVLQILSRLGIA----ERASIDECYLDLTAEAQRRLEACGG--------------------------------VPPL--PMHPDQV-----------------------HVSGA-----------ADAASWWQRPPHEWQPGERLLACAAAAVAELRQAVREELGYTCSAGI-AHTKLMAKLCSGLHKPAQQTVLPASGVPDLLAPLPVSKLRGLGGKFGEQVCSELGITTVGELAAVPLPRLESAFGDKDAQWLYAVARGVTDDAVQERTLPKSLNCGKTFRGRTSLRSMEAVHKWLLELAGELSERLEQEREDNNRVPQLLTVNLAS 2264
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: UPI001FB57A0D (DNA polymerase eta n=1 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB57A0D) HSP 1 Score: 266 bits (681), Expect = 9.980e-73 Identity = 179/503 (35.59%), Postives = 254/503 (50.50%), Query Frame = 1
Query: 535 RVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARAKEEFTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRPKGVSRCCRMVKPELRPVVEACMKMVRAFSVEA-------PRLTMLGVSAHGFADSRKDT 2022
RV+A +DMD FY Q+EQ + AL G+P VV QY T IIAVSYEAR GV R M DA+K+CP+L + +V +GKAD++FYR A V+ V+ R +E+ASIDE Y+D+T A H L + E G S+ S + P+A ED ++K+ G W A L A LS + +S E QL + GA +V +RAAV + G+ C+AG+ +HNK+LAKL ++KPN QTVLPLD V +F TLPV ++R GGK G + E LG+ G++ A+L++ G++ G + I + VK R PKS+GCSK FPGKT L S +++ WL +L+ EL RL + +E G+ +LTV L K RP SRCC +V+ E + ++++ + P LT+L +SA F D++ T
Sbjct: 7 RVVALVDMDCFYVQVEQRLNPALKGKPCVVAQYKT-----------------WKGGGIIAVSYEARAHGVTRNMWVDDAKKLCPDLQVARVRESHGKADLTFYREASVEVIEVMSR----FAVIERASIDEAYMDLTAAVHRRLKDMNDKQVE-------LTLLKTTYIQGYPQSS---SGSEPSA---EDTVLNKEEQRSRGLQEWLASLPAP-------LSGEQSSAELQL---------------------TVGAVIVEEMRAAVENHTGFRCSAGI-SHNKVLAKLACGLNKPNRQTVLPLDSVTELFSTLPVGKIRNLGGKMGASITETLGIENMGDLTQFSKAQLEQHFGEKTGQWLHDLCRGIEFEAVKPRQLPKSIGCSKNFPGKTSLASKDQVQYWLHQLALELEERLTKDREANGRVAKQLTVGVRQLGDK-RPSSFSRCCALVRYEAAKISSDSFAIIKSLNTAGNHQAAWTPPLTLLHISASKFNDTQSGT 445
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: A0A7S1NH26_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NH26_9EUGL) HSP 1 Score: 256 bits (654), Expect = 1.130e-71 Identity = 178/512 (34.77%), Postives = 260/512 (50.78%), Query Frame = 1
Query: 514 PALKEPLRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARAKEEFTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRPKGVSRCCRMVKPELRPVVEACMKMVRAFSVEAPRLTM--LGVSAHGFADSRKDTRSIQSFF 2043
PAL P V+ H+D+DAFY Q+E RD +L G+P+ VVQY D++ + P + R+ S S+IAVSYEAR FGVKR M+ +AR+ CPEL LVQVPT NGKAD++ YR AG +V+ +L R G E+ASIDE Y+DVT AL + H R ++ ++ G G VAG +W++ ++ ELL+ GAAVV+ LR V++ELGYSC+AG+ AHNKLLAKLCS +HKP QT+LP V+ + L + ++R GGK G ++ + LG+ T G++ AV L+ + G E G + D V+ R+ PKS+GC KTF + + + +++ WL ++++EL R+ +E + P + V ++ VSR C M + + A + +VR + E T+ L +SA F S SI +FF
Sbjct: 14 PAL--PRAVVVHVDLDAFYCQVEVGRDPSLQGQPIAVVQYNPFG-DLRTILPSEPRIFNDSNGSLIAVSYEARAFGVKRNMRGDEARRQCPELQLVQVPTANGKADLTIYREAGAQVIDILARGG----VCERASIDEAYLDVTE--EALRRARRDHG-------------------------------------RPVLPLNPEQCRVYGPDG------------VAGCE--------------AWFSTPDWAWSDADELLAHGAAVVAELRHVVQTELGYSCSAGI-AHNKLLAKLCSGLHKPQQQTILPESAVQRLLDPLMIAKLRSLGGKLGQQVAQVLGIETVGQLRAVPETRLRTLFGPETGPWLHRMARGQSSDRVQQRTLPKSLGCGKTFRAQNAIRTLQDVQYWLQQIARELAERIGSDRERNQRVPQTMGVGLSS-----HGDHVSRSCAMPGLSVESIASAGLALVRRWVAERAEWTVTDLYLSACNFR-SIAACPSIATFF 446
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: A0A3P8ZR68_ESOLU (Polymerase (DNA directed), eta n=3 Tax=Esox lucius TaxID=8010 RepID=A0A3P8ZR68_ESOLU) HSP 1 Score: 260 bits (665), Expect = 5.970e-71 Identity = 184/571 (32.22%), Postives = 276/571 (48.34%), Query Frame = 1
Query: 535 RVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSD-----DDASKEQQLADGVSWWARAKEEFTRDQEL-LSCGAAVVSRLRAAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAWEKSNAICRDPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAALQQKGRPKGVSRCCRMVKPELRPVVEACMKMVRAFSVEA-------PRLTMLGVSAHGFADSRK-DTRSIQSFFGA--APAAAALEPSS---SEEVPRRGGSANSSLSAWYRRATDEGRGRRREVDEE 2190
RV+A +DMD FY Q+EQ + AL P VV QY T IIAVSYEAR +GV R M A DA+K+CP+L + +V GKAD++ YR A V+ V+ R +E+ASIDE Y+D+T A L SL D ++ K TTHV G + ++++ ++Q + G+ W + EL L+ GA +V +RAAV G+ C+AG+ +HNK+LAKL ++KPN QT+LPLD + +F++LP+ ++R GGK G + E L V GE+ A+L++ GD+ G ++ I +PVK R PKS+GCSK FPGKT L + +++ WL +L+ EL RL + +E G+ +LTV L K +P SRCC + + + + ++++ + P LT+L +SA F D+ I F A+ +PSS ++ P+R GS + + +RRA ++ R R+ DEE
Sbjct: 7 RVVALVDMDCFYVQVEQRLNPALKNTPCVVAQYKT-----------------WKGGGIIAVSYEARAYGVTRNMWADDAKKLCPDLQVARVRESRGKADLTHYRDASVEVIEVMSR----FAVIERASIDEAYMDLTSAVQQRLKSLTDQQI--------------------------------------DPQLLK-------------------TTHVQGYPEPPPHHEESAPDEQRSKGLQQWLCSVSGVDGCAELQLAVGAVIVEEMRAAVEEHTGFRCSAGI-SHNKVLAKLACGLNKPNRQTILPLDSIPELFNSLPISKIRNLGGKLGASITEMLEVENMGELTRFSQAQLEQHFGDKTGQWLYDLCRGIDFEPVKPRQLPKSIGCSKNFPGKTSLVTRDQVQHWLYQLALELQERLTKDREMNGRVAKQLTVGIRQLGDK-KPSSFSRCCALARYDATKISSDSFAIIKSLNTAGNHQAAWTPPLTLLHISASKFQDAPSAGVGGIAGFLSGDGTSTQASTQPSSGSPTDSTPKRPGS----IQSLFRRAAEKQRERKEGGDEE 493
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Match: A0A7J7PJW7_9CHLO (UmuC domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PJW7_9CHLO) HSP 1 Score: 262 bits (669), Expect = 1.380e-70 Identity = 179/476 (37.61%), Postives = 251/476 (52.73%), Query Frame = 1
Query: 532 LRVIAHIDMDAFYAQIEQLRDAALTGRPVVVVQYPTSNHDIKDMAPDDNRVVEGSASSIIAVSYEARPFGVKRGMKAGDARKVCPELSLVQVPTRNGKADISFYRHAGERVVAVLERAGGALTTVEKASIDEVYVDVTRAAHALLSSLGSHNSESGGXXXXXXXXXXXXXDGKCASTAEGSKAPPAASPREDGEVSKKRWEDIGEGGWTAVLSATATTHVAGLSDDDASKEQQLADGVSWWARAKEEFTRDQELLSCGAAVVSRLRAAVRSELGYSCTAGVLAHNKLLAKLCSNMHKPNAQTVLPLDKVEVVFHTLPVERVRGWGGKFGVKMMEKLGVSTAGEVAAVGAAELQRVLGDEEGWRAW-EKSNAICR------------------------------------DPVKARSAPKSVGCSKTFPGKTKLTSFSEIERWLSELSKELISRLVEQQEGEGQTPSKLTVSFAAL 1848
+RV+AH+D+DAFY Q+E R+ +L G PVVVVQY D++ + P DNR+ S SIIAVSYEAR GVKR M A A+K+CPEL++VQVP +GKADI YR AG V+ VL + GA+ E+AS+DE Y+DVT A LL++ AA G+ + + E GW A A AG+S +WW+R ++ +T+D+ LL+ GA VV++LRAAV +LG+SC+AG+ AH K+LAKL S ++KP QT++P V + LP+ ++R GGKFG ++M+ LGVST GE+AAV L+ ++G E AW ++ + R + VK R+ PKS+ C KTF G + LT + + WL +L+ EL RL + +TPS+LTVS L
Sbjct: 1 MRVLAHVDLDAFYTQVEVKRNPSLKGTPVVVVQYNPYG-DLRTVKPSDNRLFPDSNGSIIAVSYEARAHGVKRNMMAQAAKKLCPELNIVQVPVAHGKADIQIYRDAGAAVIGVL--SSGAVC--ERASVDEAYLDVTAGAQQLLAA--------------------------------------AAXXXXXGDSAAESIE-----GWHV---ADAEPRTAGVS--------------AWWSRPRDSWTQDEALLAAGAVVVAQLRAAVAQQLGFSCSAGI-AHTKILAKLGSGLNKPAQQTLVPAAAVPGLLGPLPLPKLRQLGGKFGEEVMQGLGVSTVGELAAVPLPRLEALVGLENA--AWLQRLAQLSRCSTLPNAAGCGETLPAASTPDTPGATVHTALRGKDDEEVKPRTLPKSISCGKTFRGGSALTGLTAVHSWLQQLATELQERLEADRRDHQRTPSQLTVSVDTL 408 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig83.16482.1 >prot_E-siliculosus-1a_M_contig83.16482.1 ID=prot_E-siliculosus-1a_M_contig83.16482.1|Name=mRNA_E-siliculosus-1a_M_contig83.16482.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=945bp MATSATKSSTAKIPPAAGNAWTGGSAVSAGGGRGLAPALKEPLRVIAHIDback to top mRNA from alignment at E-siliculosus-1a_M_contig83:355890..363520+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig83.16482.1 ID=mRNA_E-siliculosus-1a_M_contig83.16482.1|Name=mRNA_E-siliculosus-1a_M_contig83.16482.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7631bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:355890..363520+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig83:355890..363520+ >mRNA_E-siliculosus-1a_M_contig83.16482.1 ID=mRNA_E-siliculosus-1a_M_contig83.16482.1|Name=mRNA_E-siliculosus-1a_M_contig83.16482.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=5670bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:355890..363520+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |