prot_E-siliculosus-1a_F_contig1047.342.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1047.342.1
Unique Nameprot_E-siliculosus-1a_F_contig1047.342.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length408
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1047.342.1 vs. uniprot
Match: A0A6H5JNJ8_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNJ8_9PHAE)

HSP 1 Score: 786 bits (2031), Expect = 5.420e-287
Identity = 392/408 (96.08%), Postives = 396/408 (97.06%), Query Frame = 0
Query:    1 MAADSTSS-KIWQELRKLRDDIPPPVDNNTDSNKGDQESSACYKDFAAFAACNEVRVAIGRSSALPRDQFLAIFTQLVAGPRLDELLDLFKLSRSPPHPALQYACLVALHGVAELSDRRKDLLTRPDVVKELCAVMASPRQRLVTPTSAGAGGVEIVNAAAGAITTITGLFTSNGPLEPPFAKLWVELGAVSALASCLENHAVFDRSNPVSSDLPLCFFLIATSLLAGAADSVSEEDKLRLGKAWLTLFLEATRWIADEAADLLADFYTRPNWLKNIVGRMPEKLRASAVAAARECEREGTGSGSSSWKGGKTDRLALALLCGNAYNWDAEGELVGRRCAGPRCDRVQKCGHGGGNPHPAASGDEGGDGAASVAFKRCSQCHAVGYCSRECQKAGWKKHRKACSAVNS 407
            M ADSTSS KIWQELRKLRDDIPPPVDNNT SNKGDQESS CYKDFAAFAACNEVRVAIGRSSALPRDQFLAIF QLVAGPRLDELL+LFK SRSPPHPALQYACLVALHGVAELSDRRKDLLTRPDVVKELCAVMASPRQRLVTPTSAGAGGVEIVNAAAGA+TTITGLFTSNGPLEPP+AKLWVELGAVSALASCLENHAVFDRSNPVS DLPLCFFLIATSLLAGAADSVSEEDKLRLGKAWLT+FLEATRWIADEAADLLADFYTRPNWLKNIV RMPEKLRASAVAAARECEREGTGSGSS WKGGK DRLALALLCGNAYNWDA GELVGRRCAGPRCDRVQKCGHGGGNPHPAAS DEGGDGAASVAFKRCSQCHAVGYCSRECQKAGWKKHRKACSAVNS
Sbjct:    1 MTADSTSSSKIWQELRKLRDDIPPPVDNNTGSNKGDQESSTCYKDFAAFAACNEVRVAIGRSSALPRDQFLAIFRQLVAGPRLDELLELFKFSRSPPHPALQYACLVALHGVAELSDRRKDLLTRPDVVKELCAVMASPRQRLVTPTSAGAGGVEIVNAAAGAVTTITGLFTSNGPLEPPYAKLWVELGAVSALASCLENHAVFDRSNPVSGDLPLCFFLIATSLLAGAADSVSEEDKLRLGKAWLTVFLEATRWIADEAADLLADFYTRPNWLKNIVERMPEKLRASAVAAARECEREGTGSGSSPWKGGKADRLALALLCGNAYNWDAGGELVGRRCAGPRCDRVQKCGHGGGNPHPAASEDEGGDGAASVAFKRCSQCHAVGYCSRECQKAGWKKHRKACSAVNS 408          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.342.1 vs. uniprot
Match: D8LGK8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK8_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 2.270e-9
Identity = 60/207 (28.99%), Postives = 83/207 (40.10%), Query Frame = 0
Query:  221 ATSLLAGAADSVSEEDKLRLGKAWLTLFLEATRWIADEAA------------------------DLLADFYTRPNWLKNIVGRMPEKLRASAVAAARECEREGTGSGSSSWKGGKTDRLALALLCGNAYNWDAEGELVGRRCAGPRCDRVQ-KCGHGGGNPHPAASGDEGGDGAASVAFKRCSQCHAVGYCSRECQKAGWKKHRKAC 402
            A +++    D  S   + RL +A+L L  E   W+A   A                        +LL +     + L       P +LRA AVAAAR+CE +GT      +  G   +LA  L  G           + RR AG    +++ K      N   A  G   G+ +    FK CS+C    YCS ECQKA WK H+  C
Sbjct:  279 AGAVVDAETDKASRAARQRLAEAFLRLLAERREWVARSLAMAANASPTDLSGGGATAAAPVTINNLLVNSLAHADLLGAFTRLTPVRLRAQAVAAARQCETDGT------FAPGFGAQLARLLGLGGQQE-------LNRRMAGHTVQKIKNKEAARAANIKCAMCGKRQGNASGGAKFKVCSRCQVAMYCSGECQKAHWKTHKMEC 472          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.342.1 vs. uniprot
Match: A0A8K0WV57_9HYPO (Uncharacterized protein n=1 Tax=Stachybotrys elegans TaxID=80388 RepID=A0A8K0WV57_9HYPO)

HSP 1 Score: 55.8 bits (133), Expect = 2.060e-5
Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = 0
Query:  372 VAFKRCSQCHAVGYCSRECQKAGWKKHRKAC 402
            V+ KRC++CH   YCSRECQKA WK+HR+ C
Sbjct:   15 VSLKRCAKCHTTPYCSRECQKADWKQHRRTC 45          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.342.1 vs. uniprot
Match: S8AH82_DACHA (MYND-type zinc finger protein samB n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) TaxID=1284197 RepID=S8AH82_DACHA)

HSP 1 Score: 55.1 bits (131), Expect = 4.380e-5
Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 0
Query:  370 ASVAFKRCSQCHAVGYCSRECQKAGWKKHRKACSAVNS 407
            AS   K C++C +V YCSR+CQKA WK H+K C  VN+
Sbjct:   15 ASEDLKHCARCKSVNYCSRDCQKANWKHHKKVCGKVNT 52          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.342.1 vs. uniprot
Match: A0A319E0C8_ASPSB (MYND-type zinc finger protein samB n=1 Tax=Aspergillus sclerotiicarbonarius (strain CBS 121057 / IBT 28362) TaxID=1448318 RepID=A0A319E0C8_ASPSB)

HSP 1 Score: 55.1 bits (131), Expect = 5.910e-5
Identity = 22/36 (61.11%), Postives = 28/36 (77.78%), Query Frame = 0
Query:  368 GAASVAFKRCSQCHAVGYCSRECQKAGWKKHRKACS 403
            G+ASV  KRC++C    YCSR+CQKA WKKH++ CS
Sbjct:   17 GSASVPLKRCAKCKTQWYCSRDCQKADWKKHKQICS 52          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.342.1 vs. uniprot
Match: A0A0F9X4H5_TRIHA (MYND-type zinc finger protein samB n=4 Tax=Trichoderma TaxID=5543 RepID=A0A0F9X4H5_TRIHA)

HSP 1 Score: 54.7 bits (130), Expect = 6.980e-5
Identity = 20/36 (55.56%), Postives = 27/36 (75.00%), Query Frame = 0
Query:  372 VAFKRCSQCHAVGYCSRECQKAGWKKHRKACSAVNS 407
            V+ KRC++CH   YCSR+CQKA WK H+K C+  +S
Sbjct:   15 VSLKRCAKCHTTPYCSRDCQKADWKAHKKICAKNHS 50          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.342.1 vs. uniprot
Match: A0A0N0RZN0_9EURO (MYND-type zinc finger protein samB n=1 Tax=Penicillium nordicum TaxID=229535 RepID=A0A0N0RZN0_9EURO)

HSP 1 Score: 54.7 bits (130), Expect = 8.310e-5
Identity = 20/32 (62.50%), Postives = 24/32 (75.00%), Query Frame = 0
Query:  373 AFKRCSQCHAVGYCSRECQKAGWKKHRKACSA 404
            A + CS+CH   YCSR+CQKA WKKH+K C A
Sbjct:  218 ALRNCSRCHKAKYCSRDCQKADWKKHKKVCKA 249          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1047.342.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JNJ8_9PHAE5.420e-28796.08MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
D8LGK8_ECTSI2.270e-928.99MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A8K0WV57_9HYPO2.060e-564.52Uncharacterized protein n=1 Tax=Stachybotrys elega... [more]
S8AH82_DACHA4.380e-555.26MYND-type zinc finger protein samB n=1 Tax=Dactyle... [more]
A0A319E0C8_ASPSB5.910e-561.11MYND-type zinc finger protein samB n=1 Tax=Aspergi... [more]
A0A0F9X4H5_TRIHA6.980e-555.56MYND-type zinc finger protein samB n=4 Tax=Trichod... [more]
A0A0N0RZN0_9EURO8.310e-562.50MYND-type zinc finger protein samB n=1 Tax=Penicil... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.60.180coord: 368..407
e-value: 1.8E-11
score: 45.4
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 372..405
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 371..402
e-value: 2.2E-7
score: 30.9
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 346..402
score: 10.557

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1047contigE-siliculosus-1a_F_contig1047:35758..37259 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1047.342.1mRNA_E-siliculosus-1a_F_contig1047.342.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1047 35758..37259 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1047.342.1 ID=prot_E-siliculosus-1a_F_contig1047.342.1|Name=mRNA_E-siliculosus-1a_F_contig1047.342.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=408bp
MAADSTSSKIWQELRKLRDDIPPPVDNNTDSNKGDQESSACYKDFAAFAA
CNEVRVAIGRSSALPRDQFLAIFTQLVAGPRLDELLDLFKLSRSPPHPAL
QYACLVALHGVAELSDRRKDLLTRPDVVKELCAVMASPRQRLVTPTSAGA
GGVEIVNAAAGAITTITGLFTSNGPLEPPFAKLWVELGAVSALASCLENH
AVFDRSNPVSSDLPLCFFLIATSLLAGAADSVSEEDKLRLGKAWLTLFLE
ATRWIADEAADLLADFYTRPNWLKNIVGRMPEKLRASAVAAARECEREGT
GSGSSSWKGGKTDRLALALLCGNAYNWDAEGELVGRRCAGPRCDRVQKCG
HGGGNPHPAASGDEGGDGAASVAFKRCSQCHAVGYCSRECQKAGWKKHRK
ACSAVNS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND