prot_E-siliculosus-1a_F_contig1047.341.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1047.341.1
Unique Nameprot_E-siliculosus-1a_F_contig1047.341.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length225
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1047.341.1 vs. uniprot
Match: D8LTH1_ECTSI (Shikimate Kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH1_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 5.520e-156
Identity = 222/224 (99.11%), Postives = 222/224 (99.11%), Query Frame = 0
Query:    1 MRRSAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEWV 224
            MRRSAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEE FRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEW 
Sbjct:    1 MRRSAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEGFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEWA 224          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.341.1 vs. uniprot
Match: A0A6H5JIK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIK7_9PHAE)

HSP 1 Score: 439 bits (1130), Expect = 9.790e-155
Identity = 222/224 (99.11%), Postives = 223/224 (99.55%), Query Frame = 0
Query:    1 MRRSAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEWV 224
            MRRSAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDM+PKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVN ILEFIDSNPPKWQKWKEKANAAGIEWV
Sbjct:   71 MRRSAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMKPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNAILEFIDSNPPKWQKWKEKANAAGIEWV 294          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.341.1 vs. uniprot
Match: A0A835ZK89_9STRA (Shikimate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK89_9STRA)

HSP 1 Score: 256 bits (653), Expect = 4.480e-83
Identity = 127/215 (59.07%), Postives = 164/215 (76.28%), Query Frame = 0
Query:   16 LRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQA------DVTVQLKPEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEWV 224
            +RLQ AELGS+LRGTNV+FVGMMGTGK++VAR LAD MGRY F+DTD IIE+L+ A V +VF + GEE FR +E++VL+++HSYVK+ VATGGGIV E +NWGK+QTG+VVWLDM   DI +RLS + EEV+KR LL G D   KL+ + ++RK  Y QA      DV V + P+D VD +  + V+ + +FIDSNPPKWQ+WK+ A A+GI WV
Sbjct:   18 IRLQTAELGSQLRGTNVYFVGMMGTGKTSVARNLADRMGRYTFMDTDAIIEQLMQAPVAKVFEEQGEEEFRDIEARVLNELHSYVKLVVATGGGIVKEKRNWGKLQTGLVVWLDMAIDDIVKRLSSNEEEVSKRSLLQGGDVAAKLQAIYDERKAMYEQASTSSSADVRVYVSPDDSVDAVVLSSVSELQKFIDSNPPKWQQWKDSAKASGINWV 232          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.341.1 vs. uniprot
Match: A0A7R9UH62_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UH62_9STRA)

HSP 1 Score: 210 bits (535), Expect = 6.360e-65
Identity = 109/205 (53.17%), Postives = 139/205 (67.80%), Query Frame = 0
Query:    6 GLSMEV-EPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNTILEFIDSNPPKW 209
            GL  +V E   +  +   L SRL GT+++FVGMMGTGKST  R LA  +  Y FLDTDT+IE   G     +F K+GEE FR++ES V+DQ  +Y ++C+ATGGG V  N+NWGKMQTG+VVWL MEP++I ER S + EEV KRPLL G D   KL E+L+KRK +Y  ADV VQL P D V+++   V   I  F+D NPPK+
Sbjct:   38 GLRADVQEEKAVEDEFTRLASRLYGTSIYFVGMMGTGKSTTGRELAKKLPGYSFLDTDTVIEAYAGQDCSAIFEKEGEEGFRNIESMVMDQACAYRRLCIATGGGAVLRNQNWGKMQTGIVVWLQMEPEEIAERFSGNDEEVEKRPLLQGGDAVDKLREILDKRKEKYEVADVHVQLSPGDSVEEVVERVCGKIHRFMDENPPKF 242          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.341.1 vs. uniprot
Match: A0A6U3Q8M5_9STRA (Shikimate kinase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Q8M5_9STRA)

HSP 1 Score: 210 bits (535), Expect = 2.280e-64
Identity = 108/220 (49.09%), Postives = 154/220 (70.00%), Query Frame = 0
Query:    6 GLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPED-GVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEWV 224
            G  M ++P      A  LG RL+G+N++FVGMMG+GKS V  A+A  MG Y FLDTDTIIE +  A++ E+FA++GE+ FR +ESQVLD VH++V+  V+TGGGIV +  NW K+Q+G+V+W+D+ P  I+ R+ KD ++   RPLL  D+P   LE+LLE+RKP+Y+QADV +++  E   ++D+   VV  +  FID NPP W+  K KA A G++WV
Sbjct:   85 GEGMTIDP------ARLLGPRLQGSNLYFVGMMGSGKSAVGDAVARRMGSYNFLDTDTIIESVTNATITEIFAQEGEDTFRDIESQVLDSVHAHVRCVVSTGGGIVKKLSNWAKLQSGVVIWIDVPPSVIYNRI-KDKDD---RPLLQNDNPLETLEKLLEERKPRYSQADVRIEVNDESMSIEDVASKVVQDLHNFIDENPPAWKIAKAKAQAEGLDWV 294          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.341.1 vs. uniprot
Match: A0A7S1Z366_TRICV (Shikimate kinase n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z366_TRICV)

HSP 1 Score: 204 bits (519), Expect = 1.290e-61
Identity = 104/219 (47.49%), Postives = 148/219 (67.58%), Query Frame = 0
Query:    6 GLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEWV 224
            G  M+++P      A  LG RL+G+N++F+GMMG+GKS V   +A  MG Y FLDTD+IIE+  G ++ E+F  +GEE FR VE Q+LD VH+YV+  V+TGGGIV   +NW K+QTG+VVWLD++P+ I +R+  D      RPLL  DDP  KL++LL +R+ +YAQAD+ +++  +   D +   V+  +  FID NPP W+K K KA A G++WV
Sbjct:  112 GEGMKIDP------ARLLGPRLQGSNLYFIGMMGSGKSAVGDIVARRMGTYNFLDTDSIIEKATGMTIPEIFEAEGEEGFRQVEGQILDSVHAYVRCVVSTGGGIVCRLQNWAKLQTGLVVWLDVDPEVIIKRIEGD----ENRPLLQTDDPLKKLKDLLGEREERYAQADLRIEVTEDMDEDAVANMVIKELHYFIDENPPAWKKAKAKAQADGLDWV 320          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.341.1 vs. uniprot
Match: A0A7R9ZGS2_9STRA (Shikimate kinase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZGS2_9STRA)

HSP 1 Score: 202 bits (513), Expect = 4.890e-61
Identity = 103/219 (47.03%), Postives = 146/219 (66.67%), Query Frame = 0
Query:    6 GLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEWV 224
            G  M+++P      A  LG RL+G+N++FVGMMG+GKS V   +A  MG Y FLDTD IIE+    S+ E+F  +GEE FR  E+QVLD VH+YV+  ++TGGG+V    NW K+QTG+V+WLD++P+ I +R+  D      RPLL  DDP  KL++LLE+R+ +Y+QADV +++  +   + +   VV  +  FID NPP W+K K KA A G++WV
Sbjct:   87 GEGMKIDP------ARLLGPRLQGSNLYFVGMMGSGKSAVGDVVARRMGTYNFLDTDEIIEKATAMSIPEIFDAEGEEGFREAEAQVLDSVHAYVRCVISTGGGLVCRMGNWSKLQTGVVIWLDVDPELIIKRIEGD----TNRPLLQADDPLQKLKDLLEERREKYSQADVRIEVTEDMDENAVADLVVKELHNFIDENPPAWKKAKAKAQAEGLDWV 295          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.341.1 vs. uniprot
Match: K0RFC3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RFC3_THAOC)

HSP 1 Score: 200 bits (509), Expect = 1.190e-60
Identity = 97/202 (48.02%), Postives = 142/202 (70.30%), Query Frame = 0
Query:   23 LGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEWV 224
            L  RLRG N++ +GMMG+GKS V  ALA  MG Y FLDTD I+E  +G S+ E+F K+GE+AFR  E+QVLD VH++V+  + TGGG+V+ N+NW K+QTG+V++L  +P+ I++R+     E   RPLL  DDP   L++L E+R+ +Y QADVT++++    V+ +T   +  + +FID NPP W++ KEKA A G++WV
Sbjct:   81 LSPRLRGCNLYLIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAVGMSIPEIFEKEGEDAFRDAEAQVLDSVHAHVRCVIGTGGGLVTRNQNWAKLQTGLVLYLKTDPETIYKRI-----EGTDRPLLQTDDPLATLKDLTEERRGKYEQADVTIEVEDGMDVEAVTDMCIRMLHDFIDDNPPAWKQAKEKAQADGLDWV 277          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.341.1 vs. uniprot
Match: K0SPY6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SPY6_THAOC)

HSP 1 Score: 200 bits (509), Expect = 1.340e-60
Identity = 97/202 (48.02%), Postives = 142/202 (70.30%), Query Frame = 0
Query:   23 LGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEWV 224
            L  RLRG N++ +GMMG+GKS V  ALA  MG Y FLDTD I+E  +G S+ E+F K+GE+AFR  E+QVLD VH++V+  + TGGG+V+ N+NW K+QTG+V++L  +P+ I++R+     E   RPLL  DDP   L++L E+R+ +Y QADVT++++    V+ +T   +  + +FID NPP W++ KEKA A G++WV
Sbjct:   85 LSPRLRGCNLYLIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAVGMSIPEIFEKEGEDAFRDAEAQVLDSVHAHVRCVIGTGGGLVTRNQNWAKLQTGLVLYLKTDPETIYKRI-----EGTDRPLLQTDDPLATLKDLTEERRGKYEQADVTIEVEDGMDVEAVTDMCIRMLHDFIDDNPPAWKQAKEKAQADGLDWV 281          
BLAST of mRNA_E-siliculosus-1a_F_contig1047.341.1 vs. uniprot
Match: A0A7S1XQA2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQA2_9STRA)

HSP 1 Score: 197 bits (500), Expect = 8.600e-60
Identity = 101/209 (48.33%), Postives = 137/209 (65.55%), Query Frame = 0
Query:    9 MEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKAN 217
            +E EP     +   L  RL+G +++ VGMMGTGKST  + LA  MG Y FLDTDT+IE   G     +F ++GEEAFR +E+ V+DQ  +Y ++CVATGGG+V   KNW KMQTG+VVWL+M+P DI ERLS   +EV KRPLLA  DP  KL E+L++R+ +YA AD+T+ +        +   V + +  FID NPP++ +  E AN
Sbjct:   35 LEQEPD----EYVRLAERLQGASLYLVGMMGTGKSTAGKELAKRMGGYSFLDTDTVIEAYAGRDCATIFEEEGEEAFRDIETMVMDQACAYKRLCVATGGGMVLRTKNWSKMQTGIVVWLNMDPADIAERLSASSDEVTKRPLLAEADPAAKLTEILDERRDRYAIADITLDMTKXXXXXXVVRMVCSRVHSFIDKNPPRFTESSEYAN 239          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1047.341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTH1_ECTSI5.520e-15699.11Shikimate Kinase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5JIK7_9PHAE9.790e-15599.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZK89_9STRA4.480e-8359.07Shikimate kinase n=1 Tax=Tribonema minus TaxID=303... [more]
A0A7R9UH62_9STRA6.360e-6553.17Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U3Q8M5_9STRA2.280e-6449.09Shikimate kinase n=1 Tax=Ditylum brightwellii TaxI... [more]
A0A7S1Z366_TRICV1.290e-6147.49Shikimate kinase n=2 Tax=Trieres chinensis TaxID=1... [more]
A0A7R9ZGS2_9STRA4.890e-6147.03Shikimate kinase n=1 Tax=Pseudictyota dubia TaxID=... [more]
K0RFC3_THAOC1.190e-6048.02Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
K0SPY6_THAOC1.340e-6048.02Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S1XQA2_9STRA8.600e-6048.33Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01100SHIKIMTKNASEcoord: 85..93
score: 45.3
coord: 123..140
score: 29.91
coord: 103..112
score: 54.62
coord: 32..47
score: 51.92
NoneNo IPR availableGENE3D3.40.50.300coord: 14..207
e-value: 3.9E-49
score: 169.4
NoneNo IPR availablePANTHERPTHR21087SHIKIMATE KINASEcoord: 14..190
NoneNo IPR availablePANTHERPTHR21087:SF16SHIKIMATE KINASE 1, CHLOROPLASTICcoord: 14..190
IPR031322Shikimate kinase/gluconokinasePFAMPF01202SKIcoord: 38..197
e-value: 6.2E-39
score: 133.7
IPR000623Shikimate kinase/Threonine synthase-like 1HAMAPMF_00109Shikimate_kinasecoord: 29..199
score: 23.197
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 30..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1047contigE-siliculosus-1a_F_contig1047:31919..35052 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1047.341.1mRNA_E-siliculosus-1a_F_contig1047.341.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1047 31919..35052 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1047.341.1 ID=prot_E-siliculosus-1a_F_contig1047.341.1|Name=mRNA_E-siliculosus-1a_F_contig1047.341.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=225bp
MRRSAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALA
DVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYV
KMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRP
LLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNTILE
FIDSNPPKWQKWKEKANAAGIEWV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR000623Shikimate_kinase/TSH1
IPR031322Shikimate/glucono_kinase