prot_E-siliculosus-1a_F_contig159.3392.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig159.3392.1
Unique Name	prot_E-siliculosus-1a_F_contig159.3392.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	932

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig159.3392.1 vs. uniprot
Match: D7FTP2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP2_ECTSI)

HSP 1 Score: 782 bits (2020), Expect = 1.130e-275
Identity = 417/464 (89.87%), Postives = 425/464 (91.59%), Query Frame = 0

Query:   10 MAPWAELNPGEGRFEELGNSLLESSSEEGDGQEDEXXXXXXXEESTEIAALRRRRAYIIAQLHNVGQSIRETEAEVLAGKCVPEISKRDLAPQDTVDESKTGSFLHAVNWSAGTDDGPGPKPLTDRAMDRARALLRLFDADGDGCLSFDEFRAYLVRLGRDKGKLGERLTTNREFWLSYVADQAGPPAAADVGGAVSFDGCLTQSGFVGHRRMVEPDHPLEVDLMTMGLDLLPESLRRWLRAKNAFDRIDAEGVSAATERGERGAKSRGEYDGSVDRGEAQLLLADAGEVMSKLRVEEELTLATMHAKLMLEVVEERRKRNRLAHTQALSRSAVNDAQRIYRTAWLSWFMSGRAKEERETSWLEKSLIRLKTRLYRGFRACHSLVGRPRRVLEELVQQGLIS---------------------SNLLAPFKGSDVRATLRAAIGDAEDDGSGFSVSLNFLHKGN 452
            MAPWAELNPGEGRF++LGNSLLESS          XXXXXXX     IAALRRRRAYIIAQLHNVGQSIRETEAEVLAGKCVPEISKRDLAPQDTVDESKTGSFLHAVNWSAGTDDGPGPKPLTDRAMDRARALLRLFDADGDGCLSFDEFRAYLVRLGRDKGKLGERLTTNREFWLSYVADQAGPPAAADVGGAVSFDGCLTQSGFVGHRRMVE DHPLEVDL+TMGLDLLPESL+RWLR KNAFDRIDAEGVSAATERGERGAKSRG+YDGSVDRGEAQLLLADAGEVMSKLRVEEELTLATMHAKLMLEVVEERRKRNRLAHTQALSRSAVNDAQRIYRTAWLSWFMSGRAKEERETSWLEK+LIRLKTRLYRGFRAC+SLVGRPRRVLEELVQQGLIS                     +NLLAPFKGSD RATLRAAIGDAEDDGSGFSVSLNFLHKGN
Sbjct:    1 MAPWAELNPGEGRFDQLGNSLLESSXXXXXXXXXXXXXXXXXXXXXXIAALRRRRAYIIAQLHNVGQSIRETEAEVLAGKCVPEISKRDLAPQDTVDESKTGSFLHAVNWSAGTDDGPGPKPLTDRAMDRARALLRLFDADGDGCLSFDEFRAYLVRLGRDKGKLGERLTTNREFWLSYVADQAGPPAAADVGGAVSFDGCLTQSGFVGHRRMVEADHPLEVDLLTMGLDLLPESLQRWLRVKNAFDRIDAEGVSAATERGERGAKSRGDYDGSVDRGEAQLLLADAGEVMSKLRVEEELTLATMHAKLMLEVVEERRKRNRLAHTQALSRSAVNDAQRIYRTAWLSWFMSGRAKEERETSWLEKNLIRLKTRLYRGFRACYSLVGRPRRVLEELVQQGLISCTSLILNPTGRFDDVTLYGVAANLLAPFKGSDARATLRAAIGDAEDDGSGFSVSLNFLHKGN 464

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BLAST of mRNA_E-siliculosus-1a_F_contig159.3392.1 vs. uniprot
Match: D7FTP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP1_ECTSI)

HSP 1 Score: 417 bits (1071), Expect = 2.290e-135
Identity = 274/360 (76.11%), Postives = 281/360 (78.06%), Query Frame = 0

Query:  571 QILESRTLVLNDRLKVSISVEGCFCGPLVSKLLEETVASMIDSVQQAVADSAEHDFGRVEREARTQKNAPGMRHPLVVPKRRVARSVREGRGGGLPGGGSGGVGQKQSASSGGTSAAKAAIITPTRGRLLTEREKRFRDTKTSKWLDRMWAFAAKLRGAKAFALDLEASSPLEFLESSWARAYLPASWRSQEAFTTPGFAAGWFTSWKSSFLAQASALGGRAREHLQRMRARQEAAVEXXXXXXXXXXXXXXXXXXXXXXXLGVSKALLAEAMEEKEEETVRRLREAKDKQMEEYAELEDALLTCTKYLLGPRELRIQSGPNVLVAEFQGLDILDALSAARHQGGEEDDGGSTSSGSTDS 930
            +ILESRTLVL+DRLKVSIS EGCFCGPLVSKLLEET+ASMID+V+QAVADSAEHD GRVEREARTQKNAPGMRHPLVVPKRRVA SVREGRG GLPGGGSGGVGQK+S SSGGTSA  AAIITPTRGRLLTER KRF+DTKTSKWLDRMWAFAAKLRGAKAFALDLEASSPLEFLESSWARA                                                        XXXXXXXXXXXXXXXXXXXXXXX  VSKALLAEAM EKEEETVRRLREAKDKQMEEYAELEDALL CTKYLLGPRELRIQSG NVLVAEFQGLDILDALSAARH GGE         GSTDS
Sbjct:    4 EILESRTLVLDDRLKVSISAEGCFCGPLVSKLLEETLASMIDNVRQAVADSAEHDVGRVEREARTQKNAPGMRHPLVVPKRRVAGSVREGRGAGLPGGGSGGVGQKKSESSGGTSAEMAAIITPTRGRLLTERGKRFQDTKTSKWLDRMWAFAAKLRGAKAFALDLEASSPLEFLESSWARAXXXXX-----------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSKALLAEAMGEKEEETVRRLREAKDKQMEEYAELEDALLACTKYLLGPRELRIQSGHNVLVAEFQGLDILDALSAARHPGGEXXXXXXXXXGSTDS 316

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BLAST of mRNA_E-siliculosus-1a_F_contig159.3392.1 vs. uniprot
Match: A0A6U1BVW4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1BVW4_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.140e-14
Identity = 65/206 (31.55%), Postives = 98/206 (47.57%), Query Frame = 0

Query:  127 PGPKPLTDRAMDRARALLRLFDADGDGCLSFDEFRAYLVRLGRDKGKLGERLTTNREFWLSYVADQAGPPAAADVGGAVSFDGCLTQSGFVGHRRMVEPDHPLEVDLMTMGLDLLPESLRRWLRAKNAFDRIDAEGVSAATERGERGAKSRGEYDGSVDRGEAQLLLADAGEVMSKLRVEEELTLATMHAKLMLEVVEERRKRNRL 332
            P  +  T R  D+   L   F     G +++ +FR YL  L R   +    +  + E W SY+ D  G   A          G LT   F+ +R  +E  +PLE DL+++GL LLP++L  W + + AFDR+  EG++   E      ++  EY  +  R E QL   D GE+MS +  E  LT       +M E++   RK +RL
Sbjct:   70 PRTETFTVRGADKVHELYERF-CSVPGRMTYFDFRGYLHALRR-LDEFDPHIIDSEEAWRSYMTDMFGTDEA----------GGLTPGQFLAYREWIESQYPLEADLLSIGLPLLPDTLIAWKQCEAAFDRLADEGITE--EEKFMLLRAGEEYISNFPRCEFQLFAYDNGEIMSDMECERLLTTHQDRLAVMCELLGRHRKASRL 261

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig159.3392.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig159.3392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FTP2_ECTSI	1.130e-275	89.87	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]
D7FTP1_ECTSI	2.290e-135	76.11	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6U1BVW4_9STRA	1.140e-14	31.55	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 793..813
None	No IPR available	COILS	Coil	Coil	coord: 840..871
None	No IPR available	GENE3D	1.10.238.10		coord: 72..181 e-value: 6.5E-6 score: 28.2
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 139..167 e-value: 9.6E-4 score: 28.4
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 135..170 score: 14.932
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 148..160
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 105..168

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig159	contig	E-siliculosus-1a_F_contig159:54133..68636 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig159.3392.1	mRNA_E-siliculosus-1a_F_contig159.3392.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig159 54133..68636 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig159.3392.1 ID=prot_E-siliculosus-1a_F_contig159.3392.1|Name=mRNA_E-siliculosus-1a_F_contig159.3392.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=932bp
MNSSIPPTSMAPWAELNPGEGRFEELGNSLLESSSEEGDGQEDEEGRGAT
DEESTEIAALRRRRAYIIAQLHNVGQSIRETEAEVLAGKCVPEISKRDLA
PQDTVDESKTGSFLHAVNWSAGTDDGPGPKPLTDRAMDRARALLRLFDAD
GDGCLSFDEFRAYLVRLGRDKGKLGERLTTNREFWLSYVADQAGPPAAAD
VGGAVSFDGCLTQSGFVGHRRMVEPDHPLEVDLMTMGLDLLPESLRRWLR
AKNAFDRIDAEGVSAATERGERGAKSRGEYDGSVDRGEAQLLLADAGEVM
SKLRVEEELTLATMHAKLMLEVVEERRKRNRLAHTQALSRSAVNDAQRIY
RTAWLSWFMSGRAKEERETSWLEKSLIRLKTRLYRGFRACHSLVGRPRRV
LEELVQQGLISSNLLAPFKGSDVRATLRAAIGDAEDDGSGFSVSLNFLHK
GNASPEYPVDALPPGVGMSVTLDLEGKNDTPEQALDKVAAAVEKVVRAHA
LPELKRIVLFHSMRVTVANLPDKSQALRVAFFWRAQANIDFQLRQLKLGL
RPTDLVRELTVSFFCPLQLLQILESRTLVLNDRLKVSISVEGCFCGPLVS
KLLEETVASMIDSVQQAVADSAEHDFGRVEREARTQKNAPGMRHPLVVPK
RRVARSVREGRGGGLPGGGSGGVGQKQSASSGGTSAAKAAIITPTRGRLL
TEREKRFRDTKTSKWLDRMWAFAAKLRGAKAFALDLEASSPLEFLESSWA
RAYLPASWRSQEAFTTPGFAAGWFTSWKSSFLAQASALGGRAREHLQRMR
ARQEAAVERAAAAADTEEGRKLAGMEEELRLLGVSKALLAEAMEEKEEET
VRRLREAKDKQMEEYAELEDALLTCTKYLLGPRELRIQSGPNVLVAEFQG
LDILDALSAARHQGGEEDDGGSTSSGSTDSP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom