prot_E-siliculosus-1a_M_contig731.15524.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig731.15524.1
Unique Nameprot_E-siliculosus-1a_M_contig731.15524.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length58
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig731.15524.1 vs. uniprot
Match: D8LHD8_ECTSI (Eukaryotic translation initiation factor 2B beta subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHD8_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 5.590e-29
Identity = 56/58 (96.55%), Postives = 56/58 (96.55%), Query Frame = 0
Query:    1 RQVSGPYNCAQFTVELYGNLVGSCKWGTAGQLMDAVREEGKELVAAKPSELAVGNMVR 58
            RQVSGPYNCAQFTVELY NLVGSCKWGTAGQLMDAVRE GKELVAAKPSELAVGNMVR
Sbjct:   81 RQVSGPYNCAQFTVELYRNLVGSCKWGTAGQLMDAVREVGKELVAAKPSELAVGNMVR 138          
BLAST of mRNA_E-siliculosus-1a_M_contig731.15524.1 vs. uniprot
Match: A0A836CBW3_9STRA (Eukaryotic translation initiation factor 2B beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBW3_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 6.280e-18
Identity = 39/58 (67.24%), Postives = 48/58 (82.76%), Query Frame = 0
Query:    1 RQVSGPYNCAQFTVELYGNLVGSCKWGTAGQLMDAVREEGKELVAAKPSELAVGNMVR 58
            RQVSGPY+CA+ T+EL    VG+CKW TA QLM+ +R  G+EL+AAKPSELAVGN+VR
Sbjct:   49 RQVSGPYHCAKATLELLRYTVGTCKWATAAQLMELIRAVGRELIAAKPSELAVGNVVR 106          
BLAST of mRNA_E-siliculosus-1a_M_contig731.15524.1 vs. uniprot
Match: A0A7S3H5H0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H5H0_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 6.220e-10
Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 0
Query:    1 RQVSGPYNCAQFTVELYGNLVGSCKWGTAGQLMDAVREEGKELVAAKPSELAVGNMVR 58
            RQ+SG + CA+ T+E+  NL+G   + +A  +M  VR  G+EL+AA PSEL +GN+VR
Sbjct:    2 RQLSGAHQCAKATIEILRNLLGRYNFSSADHMMKVVRAVGRELIAAAPSELTIGNLVR 59          
BLAST of mRNA_E-siliculosus-1a_M_contig731.15524.1 vs. uniprot
Match: UPI0014259841 (translation initiation factor eIF-2B subunit beta-like isoform X1 n=2 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014259841)

HSP 1 Score: 61.6 bits (148), Expect = 1.190e-9
Identity = 28/57 (49.12%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    2 QVSGPYNCAQFTVELYGNLVGSCKWGTAGQLMDAVREEGKELVAAKPSELAVGNMVR 58
            QV G Y+ A  TV+L   +V   +W  AG LMD +R+EG++++AA+PSE A+GN+VR
Sbjct:   96 QVVGSYDVANKTVKLLRRVVSQTRWNHAGDLMDRIRKEGRKMMAAQPSESAIGNVVR 152          
BLAST of mRNA_E-siliculosus-1a_M_contig731.15524.1 vs. uniprot
Match: UPI001E1DDAA6 (translation initiation factor eIF-2B subunit beta-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDAA6)

HSP 1 Score: 57.4 bits (137), Expect = 3.620e-8
Identity = 26/56 (46.43%), Postives = 38/56 (67.86%), Query Frame = 0
Query:    3 VSGPYNCAQFTVELYGNLVGSCKWGTAGQLMDAVREEGKELVAAKPSELAVGNMVR 58
            + G +N A  TV L   ++   KW  A +LMD V+ EG++++AA+PSE A+GNMVR
Sbjct:   28 IQGSFNVAYKTVSLMVRIISQTKWMNAKELMDIVKTEGQKMMAAQPSESAIGNMVR 83          
BLAST of mRNA_E-siliculosus-1a_M_contig731.15524.1 vs. uniprot
Match: UPI0005F57F28 (translation initiation factor eIF-2B subunit beta isoform X1 n=2 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F57F28)

HSP 1 Score: 57.0 bits (136), Expect = 4.960e-8
Identity = 23/57 (40.35%), Postives = 36/57 (63.16%), Query Frame = 0
Query:    2 QVSGPYNCAQFTVELYGNLVGSCKWGTAGQLMDAVREEGKELVAAKPSELAVGNMVR 58
            ++ G YN    T+ ++  ++ + +WGTA  LMD VR+ GK L+ + P E  +GNMVR
Sbjct:   23 EIKGTYNIVVATISMFKEIISNTEWGTAKDLMDIVRQNGKYLIKSLPLETCIGNMVR 79          
BLAST of mRNA_E-siliculosus-1a_M_contig731.15524.1 vs. uniprot
Match: A0A8D0H6J8_SPHPU (Eukaryotic translation initiation factor 2B subunit beta n=5 Tax=Sauria TaxID=32561 RepID=A0A8D0H6J8_SPHPU)

HSP 1 Score: 55.5 bits (132), Expect = 1.740e-7
Identity = 23/49 (46.94%), Postives = 38/49 (77.55%), Query Frame = 0
Query:   10 AQFTVELYGNLVGSCKWGTAGQLMDAVREEGKELVAAKPSELAVGNMVR 58
            A+  + L   ++G+ +WG+AG+LM+ +R+EG+ ++AA+PSE  VGNMVR
Sbjct:   35 ARQALGLLRRIIGNGRWGSAGELMELIRKEGRRMMAAEPSETTVGNMVR 83          
BLAST of mRNA_E-siliculosus-1a_M_contig731.15524.1 vs. uniprot
Match: A0A075ASJ4_ROZAC (Initiation factor 2B-related domain-containing protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075ASJ4_ROZAC)

HSP 1 Score: 55.1 bits (131), Expect = 2.440e-7
Identity = 24/58 (41.38%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    1 RQVSGPYNCAQFTVELYGNLVGSCKWGTAGQLMDAVREEGKELVAAKPSELAVGNMVR 58
            R++ G +NC   T +L   +V   +W  A  LM  +++ GKELV A+P+E+ VGN+VR
Sbjct:   21 REIKGSWNCGVETAKLLRLVVSITRWNNASTLMQIIKDVGKELVKAQPTEIVVGNIVR 78          
BLAST of mRNA_E-siliculosus-1a_M_contig731.15524.1 vs. uniprot
Match: F7DQ88_MONDO (Uncharacterized protein n=1 Tax=Monodelphis domestica TaxID=13616 RepID=F7DQ88_MONDO)

HSP 1 Score: 52.8 bits (125), Expect = 1.060e-6
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   10 AQFTVELYGNLVGSCKWGTAGQLMDAVREEGKELVAAKPSELAVGNMVR 58
            AQ TV L   +V   +W  AG+LM+ +R+EG+++ AA+P E  VGNMVR
Sbjct:   35 AQETVGLLHQIVAHGRWSNAGELMELIRKEGRQMTAAQPLETTVGNMVR 83          
BLAST of mRNA_E-siliculosus-1a_M_contig731.15524.1 vs. uniprot
Match: H2Z4N0_CIOSA (Uncharacterized protein n=2 Tax=Ciona savignyi TaxID=51511 RepID=H2Z4N0_CIOSA)

HSP 1 Score: 53.1 bits (126), Expect = 1.150e-6
Identity = 23/55 (41.82%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    4 SGPYNCAQFTVELYGNLVGSCKWGTAGQLMDAVREEGKELVAAKPSELAVGNMVR 58
            +G Y+ A  T+     ++   +W  A +LM+ +R+EGK++VAA+PSE  VGN+VR
Sbjct:   14 NGSYDLAYKTINHLRKVISQTRWAHAQELMNTIRKEGKQIVAAQPSEYVVGNIVR 68          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig731.15524.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHD8_ECTSI5.590e-2996.55Eukaryotic translation initiation factor 2B beta s... [more]
A0A836CBW3_9STRA6.280e-1867.24Eukaryotic translation initiation factor 2B beta s... [more]
A0A7S3H5H0_9STRA6.220e-1048.28Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
UPI00142598411.190e-949.12translation initiation factor eIF-2B subunit beta-... [more]
UPI001E1DDAA63.620e-846.43translation initiation factor eIF-2B subunit beta-... [more]
UPI0005F57F284.960e-840.35translation initiation factor eIF-2B subunit beta ... [more]
A0A8D0H6J8_SPHPU1.740e-746.94Eukaryotic translation initiation factor 2B subuni... [more]
A0A075ASJ4_ROZAC2.440e-741.38Initiation factor 2B-related domain-containing pro... [more]
F7DQ88_MONDO1.060e-648.98Uncharacterized protein n=1 Tax=Monodelphis domest... [more]
H2Z4N0_CIOSA1.150e-641.82Uncharacterized protein n=2 Tax=Ciona savignyi Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45859:SF1TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETAcoord: 1..58
NoneNo IPR availablePANTHERPTHR45859FAMILY NOT NAMEDcoord: 1..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig731contigE-siliculosus-1a_M_contig731:11001..11174 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig731.15524.1mRNA_E-siliculosus-1a_M_contig731.15524.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig731 11001..11174 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig731.15524.1 ID=prot_E-siliculosus-1a_M_contig731.15524.1|Name=mRNA_E-siliculosus-1a_M_contig731.15524.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=58bp
RQVSGPYNCAQFTVELYGNLVGSCKWGTAGQLMDAVREEGKELVAAKPSE
LAVGNMVR
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