prot_E-siliculosus-1a_M_contig73.15480.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig73.15480.1
Unique Nameprot_E-siliculosus-1a_M_contig73.15480.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length66
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig73.15480.1 vs. uniprot
Match: D7FRX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX9_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 2.870e-28
Identity = 49/65 (75.38%), Postives = 52/65 (80.00%), Query Frame = 0 
Query:    1 MPDVIKPGPPNXXXXXXXXXXXXXENGAVTMDLMGSGRDFPLQVLMLVLVLLGWLHANGLPLCHC 65
            MPDV+KPGPP+             ENGAVTMDLMGSGRDFPLQVL+LVLVLLGWLHANGLPLCHC
Sbjct:    1 MPDVVKPGPPSNGGDADGGGEDEQENGAVTMDLMGSGRDFPLQVLILVLVLLGWLHANGLPLCHC 65
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig73.15480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRX9_ECTSI2.870e-2875.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 58..65
NoneNo IPR availableTMHMMTMhelixcoord: 40..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig73contigE-siliculosus-1a_M_contig73:358355..361587 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig73.15480.1mRNA_E-siliculosus-1a_M_contig73.15480.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig73 358355..362491 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig73.15480.1 ID=prot_E-siliculosus-1a_M_contig73.15480.1|Name=mRNA_E-siliculosus-1a_M_contig73.15480.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=66bp
MPDVIKPGPPNNGGGADGGGEEEQENGAVTMDLMGSGRDFPLQVLMLVLV
LLGWLHANGLPLCHC*
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