mRNA_E-siliculosus-1a_F_contig1047.336.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1047.336.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1047.336.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1047.336.1 vs. uniprot
Match: A0A6H5JRQ4_9PHAE (TPR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRQ4_9PHAE)

HSP 1 Score: 599 bits (1545), Expect = 1.180e-210
Identity = 374/395 (94.68%), Postives = 382/395 (96.71%), Query Frame = 1

Query:   55 MKRVFGAVSGAFRSLVPKATAPAAHHQESVRKAMESLAPPGRRLPSESKTLAMELVAAASEGDKEKELSL-KTPEEMFLAANALHQGKHIPADKETAFALWKKAAEAGHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDVGIPQDEERALELFKAAATGGFVPAIHAAASMMEAGKGGEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQLEGGLATTGDDTMAALFEAKREGLLSDTKKGNIAPGGQTVEHGEDQGVRQLGESSSSSSEKASA 1236
            MKRVFGAVSGAFRSLVPKATAPAAHHQESVRKAMESLAPPGRRLPSESK L MELVAAASEGDKEKELSL KTPE+MFLAANA HQGKHI ADKETAFALWKKAAEAGHP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDVGIPQDEERAL LFKAAATGGFVPAIHAAASMMEAGKGGEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGRAGLE+DHKKAFELHL+AANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQL+GGLAT GD TMAALFEAK+EGLLSDTKKGN+A G QT EHGEDQGV+Q+GESSSSSSEKASA
Sbjct:    1 MKRVFGAVSGAFRSLVPKATAPAAHHQESVRKAMESLAPPGRRLPSESKPLVMELVAAASEGDKEKELSLLKTPEDMFLAANAFHQGKHIRADKETAFALWKKAAEAGHPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDVGIPQDEERALGLFKAAATGGFVPAIHAAASMMEAGKGGEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGRAGLEVDHKKAFELHLKAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQLKGGLATAGDATMAALFEAKQEGLLSDTKKGNVARGSQTDEHGEDQGVKQIGESSSSSSEKASA 395

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BLAST of mRNA_E-siliculosus-1a_F_contig1047.336.1 vs. uniprot
Match: A0A1Y1RC54_9PROT (Beta-lactamase n=1 Tax=Campylobacteraceae bacterium 4484_4 TaxID=1970775 RepID=A0A1Y1RC54_9PROT)

HSP 1 Score: 83.2 bits (204), Expect = 2.280e-14
Identity = 50/119 (42.02%), Postives = 66/119 (55.46%), Query Frame = 1

Query:  556 DEERALELFKAAATGGFVPAIHAAASMMEAGKGGEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFE 912
            D E A  ++   A  G   A  + A M + G+G EK++A+A +  E A+E   P A   LA WY  G+ GLE +  KA+EL L+AA   +PRAQY  AV    G G  QN  EAA W+E
Sbjct:   17 DYEEAFSVYSELAKEGDPDAQTSLAYMYQQGQGCEKDEARARELYEKAVEKKQPYALFNLAVWYANGKGGLERNPFKAYELFLEAAVAGIPRAQYEVAVMSERGNGTPQNYSEAAYWYE 135

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BLAST of mRNA_E-siliculosus-1a_F_contig1047.336.1 vs. uniprot
Match: A0A2G2PHW2_9PROT (Beta-lactamase n=1 Tax=Sulfurimonas sp. TaxID=2022749 RepID=A0A2G2PHW2_9PROT)

HSP 1 Score: 80.9 bits (198), Expect = 1.310e-13
Identity = 52/156 (33.33%), Postives = 77/156 (49.36%), Query Frame = 1

Query:  553 QDEERALELFKAAATGGFVPAIHAAASMMEAGKGGEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQ 1020
            +D   A E++   A+ G   A  +   M + G+  E +  KA ++ E+  E     A   LA  Y  G  G+E D  KA +LHLQAA   +P A Y  A+    G G  QN  EAA W+E     G  ++  NLG + ++G GV+ DR+R    ++
Sbjct:   12 KDFTTAFEIYAKLASEGNADAQTSLGYMYQNGQACEIDKQKAFKYYELGAEQKQAYALFNLAILYMNGLDGVEHDQFKAHDLHLQAAEREVPPAMYEVALMLERGLGCVQNYSEAAFWYEEGAKRGHFESFNNLGVLYKDGHGVDTDRDRCFLCFK 167

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BLAST of mRNA_E-siliculosus-1a_F_contig1047.336.1 vs. uniprot
Match: UPI0014932DB4 (sel1 repeat family protein n=2 Tax=Shigella flexneri TaxID=623 RepID=UPI0014932DB4)

HSP 1 Score: 63.5 bits (153), Expect = 1.740e-8
Identity = 44/127 (34.65%), Postives = 63/127 (49.61%), Query Frame = 1

Query:  679 VQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQLEGGL 1059
            ++WL  + E  +  A   LAT Y     G+   ++K      QAA +    AQ      YL G  + QNLP+A  WF++A A G   A   LG+M +NG GVE + E+A   +  +  AEG +E  L
Sbjct:    1 IKWLTKSAEQKNTDAIYFLATAYKGN--GIPAKNEKYLAYLQQAATLGSSNAQAEIGYLYLIGKELPQNLPDAGVWFKKAAAQGNFAAHFYLGRMYQNGDGVERNMEKAR--FHLSNAAEGGIEPAL 123

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BLAST of mRNA_E-siliculosus-1a_F_contig1047.336.1 vs. uniprot
Match: UPI000A9997F3 (SEL1-like repeat protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI000A9997F3)

HSP 1 Score: 64.3 bits (155), Expect = 7.220e-8
Identity = 44/127 (34.65%), Postives = 64/127 (50.39%), Query Frame = 1

Query:  679 VQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQLEGGL 1059
            ++WL  + E  +  A   LAT Y     G+  +++K      QAA +    AQ      YL G  + QNLP+A  WF++A A G   A   LG+M +NG GVE + E+A   +  +  AEG +E  L
Sbjct:  110 IKWLTKSAEQKNTDAIYFLATAYKGN--GIPANNEKYLAYLQQAATLGSSNAQAEIGYLYLIGKELPQNLPDAGVWFKKAAAQGNFAAHFYLGRMYQNGDGVERNMEKAR--FHLSNAAEGGIEPAL 232

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BLAST of mRNA_E-siliculosus-1a_F_contig1047.336.1 vs. uniprot
Match: UPI001CFB3400 (DAP3-binding cell death enhancer 1-like n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFB3400)

HSP 1 Score: 64.7 bits (156), Expect = 1.070e-7
Identity = 57/171 (33.33%), Postives = 86/171 (50.29%), Query Frame = 1

Query:  556 DEERALELFKAAATGGFVPAIHAAASMMEAGKGGEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGR-AGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLY-QAA----LRAEGQLE 1050
            ++  AL  F+ AA  G+  A++ A    E G+G  K+  KA  +   A EAG  +A    A +  + +   L  D  KA  L  QAA   +P AQ    V Y++     QN  +A  + + A   G   ++ +LG   ENG+GV+ + ++ALKLY QAA    L+A+  LE
Sbjct:   33 EDNTALSCFQVAADYGYCKAVYNAGVCYELGRGVVKDMIKAAAYYRCAAEAGHNLAQYRYAKYLLSPKHEKLAEDVYKAVTLLQQAAKAGLPEAQAYLGVFYMKLP--YQNDVKAVQYLQLAARSGDTSSLYHLGLCYENGLGVQQNLQKALKLYYQAASSGCLKAQEALE 201

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BLAST of mRNA_E-siliculosus-1a_F_contig1047.336.1 vs. uniprot
Match: A0A397TFK6_9GLOM (Kinase-like domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TFK6_9GLOM)

HSP 1 Score: 65.5 bits (158), Expect = 1.410e-7
Identity = 45/147 (30.61%), Postives = 77/147 (52.38%), Query Frame = 1

Query:  541 VGIPQDEERALELFKAAATGGFVPAIHAAASMMEAGKGGEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIG 981
            +G  +D+  AL  +  A+  G   A +   ++     G  K+  KA Q  +++ + G     + L   Y+ G  G  +D K+AF L+L+AANMN   AQYN AV + +G GI++N  E+  W++++   G  +A   + ++L   IG
Sbjct:  343 IGTKEDKRVALHTYNQASRNGHAIASYYMGNIF----GVNKDYNKAFQCYDLSAKGGFTFGINMLGYCYSKG-IGTFVDQKEAFYLYLRAANMNNMVAQYNVAVCFDDGIGIDKNPKESKEWYKKSADNGYDKARKTMDELLGKEIG 484

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BLAST of mRNA_E-siliculosus-1a_F_contig1047.336.1 vs. uniprot
Match: UPI001493A3DE (SEL1-like repeat protein n=1 Tax=Shigella flexneri TaxID=623 RepID=UPI001493A3DE)

HSP 1 Score: 64.3 bits (155), Expect = 3.700e-7
Identity = 44/127 (34.65%), Postives = 64/127 (50.39%), Query Frame = 1

Query:  679 VQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQLEGGL 1059
            ++WL  + E  +  A   LAT Y     G+  +++K      QAA +    AQ      YL G  + QNLP+A  WF++A A G   A   LG+M +NG GVE + E+A   +  +  AEG +E  L
Sbjct:  434 IKWLTKSAEQKNTDAIYFLATAYKGN--GIPANNEKYLAYLQQAATLGSSNAQAEIGYLYLIGKELPQNLPDAGVWFKKAAAQGNFAAHFYLGRMYQNGDGVERNMEKAR--FHLSNAAEGGIEPAL 556

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BLAST of mRNA_E-siliculosus-1a_F_contig1047.336.1 vs. uniprot
Match: A0A658XXT5_SHIFL (Beta-lactamase hcpC n=136 Tax=Enterobacterales TaxID=91347 RepID=A0A658XXT5_SHIFL)

HSP 1 Score: 64.3 bits (155), Expect = 4.300e-7
Identity = 44/127 (34.65%), Postives = 64/127 (50.39%), Query Frame = 1

Query:  679 VQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQLEGGL 1059
            ++WL  + E  +  A   LAT Y     G+  +++K      QAA +    AQ      YL G  + QNLP+A  WF++A A G   A   LG+M +NG GVE + E+A   +  +  AEG +E  L
Sbjct:  584 IKWLTKSAEQKNTDAIYFLATAYKGN--GIPTNNEKYLAYLQQAATLGSSNAQAEIGYLYLIGKELPQNLPDAGVWFKKAAAQGNFAAHFYLGRMYQNGDGVERNMEKAR--FHLSNAAEGGIEPAL 706

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BLAST of mRNA_E-siliculosus-1a_F_contig1047.336.1 vs. uniprot
Match: UPI0015FAACE3 (SEL1-like repeat protein n=2 Tax=Escherichia coli TaxID=562 RepID=UPI0015FAACE3)

HSP 1 Score: 61.6 bits (148), Expect = 5.610e-7
Identity = 43/127 (33.86%), Postives = 63/127 (49.61%), Query Frame = 1

Query:  679 VQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHLQAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQLEGGL 1059
            ++WL  + E  +  A   LAT Y     G+  +++K      QAA +    AQ      YL G  + QNLP+A  WF++A A     A   LG+M +NG GVE + E+A   +  +  AEG +E  L
Sbjct:  107 IKWLTKSAEQKNTDAIYFLATAYKGN--GIPANNEKYLAYLQQAATLGSSNAQAEIGYLYLIGKELPQNLPDAGVWFKKAAAQDNFAAHFYLGRMYQNGDGVERNMEKAR--FHLSNAAEGGIEPAL 229

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1047.336.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1047.336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 15


Match Name	E-value	Identity	Description
A0A6H5JRQ4_9PHAE	1.180e-210	94.68	TPR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0...	[more]
A0A1Y1RC54_9PROT	2.280e-14	42.02	Beta-lactamase n=1 Tax=Campylobacteraceae bacteriu...	[more]
A0A2G2PHW2_9PROT	1.310e-13	33.33	Beta-lactamase n=1 Tax=Sulfurimonas sp. TaxID=2022...	[more]
UPI0014932DB4	1.740e-8	34.65	sel1 repeat family protein n=2 Tax=Shigella flexne...	[more]
UPI000A9997F3	7.220e-8	34.65	SEL1-like repeat protein n=1 Tax=Escherichia coli ...	[more]
UPI001CFB3400	1.070e-7	33.33	DAP3-binding cell death enhancer 1-like n=1 Tax=Pr...	[more]
A0A397TFK6_9GLOM	1.410e-7	30.61	Kinase-like domain-containing protein n=1 Tax=Glom...	[more]
UPI001493A3DE	3.700e-7	34.65	SEL1-like repeat protein n=1 Tax=Shigella flexneri...	[more]
A0A658XXT5_SHIFL	4.300e-7	34.65	Beta-lactamase hcpC n=136 Tax=Enterobacterales Tax...	[more]
UPI0015FAACE3	5.610e-7	33.86	SEL1-like repeat protein n=2 Tax=Escherichia coli ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1047	contig	E-siliculosus-1a_F_contig1047:1005..5590 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	1185
Model size	1687
Exons	9
Ec32 ortholog	Ec-02_005660.1
Ec32 ortholog description	Sel1-like
Hectar predicted targeting category	mitochondrion
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	T
EggNOG OGs	COG0790@1,KOG1550@2759
EggNOG free text desc.	ERAD pathway
Seed eggNOG ortholog	2880.D8LTH7
Seed ortholog evalue	4.9e-157
Seed ortholog score	560.8
Taxonomic scope	Eukaryota

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927548.2512383-UTR-E-siliculosus-1a_F_contig1047:1004..1452	1622927548.2512383-UTR-E-siliculosus-1a_F_contig1047:1004..1452	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1047 1005..1452 -
1696318579.8285823-UTR-E-siliculosus-1a_F_contig1047:1004..1452	1696318579.8285823-UTR-E-siliculosus-1a_F_contig1047:1004..1452	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1047 1005..1452 -
1622927548.383421-UTR-E-siliculosus-1a_F_contig1047:5536..5590	1622927548.383421-UTR-E-siliculosus-1a_F_contig1047:5536..5590	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1047 5537..5590 -
1696318579.9259548-UTR-E-siliculosus-1a_F_contig1047:5536..5590	1696318579.9259548-UTR-E-siliculosus-1a_F_contig1047:5536..5590	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1047 5537..5590 -

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1047.336.1	prot_E-siliculosus-1a_F_contig1047.336.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1047 1453..5536 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1047:1005..5590-
coding sequence from alignment at E-siliculosus-1a_F_contig1047:1005..5590-

protein sequence of mRNA_E-siliculosus-1a_F_contig1047.336.1

>prot_E-siliculosus-1a_F_contig1047.336.1 ID=prot_E-siliculosus-1a_F_contig1047.336.1|Name=mRNA_E-siliculosus-1a_F_contig1047.336.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=395bp
MKRVFGAVSGAFRSLVPKATAPAAHHQESVRKAMESLAPPGRRLPSESKT
LAMELVAAASEGDKEKELSLKTPEEMFLAANALHQGKHIPADKETAFALW
KKAAEAGHPKAMYSYAGCLRNGDGTKKDLPTAVSLFERLGDQGLLEAKHA
LGLVLSSGEGEDVGIPQDEERALELFKAAATGGFVPAIHAAASMMEAGKG
GEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGRAGLELDHKKAFELHL
QAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNL
GKMLENGIGVEVDRERALKLYQAALRAEGQLEGGLATTGDDTMAALFEAK
REGLLSDTKKGNIAPGGQTVEHGEDQGVRQLGESSSSSSEKASA*

mRNA from alignment at E-siliculosus-1a_F_contig1047:1005..5590-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1047.336.1 ID=mRNA_E-siliculosus-1a_F_contig1047.336.1|Name=mRNA_E-siliculosus-1a_F_contig1047.336.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4586bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1047:1005..5590- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TAGCAGTCTCTCAGCGCTGGCGTCGTGTGCGACTACCGCCACCCTGCTCG
GAAGATGAAGCGCGTCTTTGGTGCCGTGTCTGGCGCTTTCAGATCCCTTG
TTCCCAAGGCAACCGCGCCGGCCGCACATCACCAGGAATCGGTTCGGAAG
GCGATGGAGTCTCTCGCGCCCCCGGGCAGGAGGTTGCCGTCCGAGAGCAA
GACGCTGGCGATGGAGCTCGTGGCAGCTGCTTCAGAGGGGGACAAGGAGA
AGGAACTCTCGCTGAAGACCCCAGAGGAAATGTTTCTCGCTGCTAACGCT
TTGCATCAGGTGCGTCCACCAGCTAATTTGTGTGTGTCCGTTTTGAGTCA
GTCATGTCGCATGCACCGGATTGAGTCGGCCACTGCTGCTGCTGCTGCAC
CCGGGTACTGTTGTGCGCACAACGGCCGTCGTGTACCATTCCCCGACTCT
CGTTGGAGAAGCCGGTAGCTGATCCACCACGTGCTTGTGTGCTGACGCTT
AAAGCCATCCACCCTCTTGTCTTGGCACTCACCCTGTTCACCACGGGTTT
CTGGACGAATTGCTGTAGGGCAAACACATACCCGCGGACAAGGAGACCGC
CTTTGCGCTCTGGAAGAAAGCAGCAGAAGCCGGCCACCCCAAAGCCATGT
GAGTTAATCACCGCTGCTGCCTCTCTCGACGTCCAGATTTTGCCAGCAGG
AGGGAATCCTCGCGACTTGCCAAAGAAAAGGCTGTAGCTGGGTCGGTTTG
GTTGCATGCTGGTCCTCCGTGGTGCTGGCCTTTGTTGTGTGCACGGGTTC
GGGTAGCCGTCGCTCATCAGCGTGTATATCTTCTTCATCTTTCGTTCCCC
TTGTCGTCAGTGCTCCGGACTCCGGACTCAAGCTAATGCTTGTCCCATCG
CCACAGCTAATTAGGCGCTCGTTTGACCACAACTCGATCAAAACTTGGTC
TTGGGGGGTGTTTTCTTGCGTATTTGCGTCGATGTCGTAACTCGACAGGT
ACTCGTACGCCGGCTGCTTGAGAAACGGGGACGGCACTAAGAAAGACCTT
CCCACCGCGGTGTCGCTGTTCGAGCGATTGGGGGACCAGGGCTTGCTTGA
AGCCAAGGTGCGTCGCGGGTGTGTCGGTTGAGCCATCGGGGCCTGCAAGC
CAAGACGAGATGAGCAACTGTAGGAACTGGTTGGTGCTTGCTCGATAGCT
GCTCCCGAGATGGAGCTTGGACGGAGCGGCACCGGTGACTGCTGTTTTGC
GTCGCGTTGGGTCCATGAACTCACATGTCCATTACCCCACTCCCCGGACT
GTTCCAGCACGCGCTAGGGCTAGTGTTGTCGTCGGGCGAGGGGGAGGATG
TGGGAATCCCGCAGGACGAGGAACGTGCGCTCGAGCTCTTCAAGGCCGCT
GCTACTGGTGAGGGGTGACCTTGACGTTAGCACGCGTTGATGACGGTGTC
CATGTGTAACCAGTTACAACTCTCCAGCTTCAGAGACCACGTCTTGCATC
GAATGCGGTTAAGAAGAACCGAGAACGAGTTGGGTTGAATGACGTCACGT
TGAGTGAACCGTGTGTGAATGTAGAGACATGGCGCCTTCCCTCCACAACC
GAAACGCATTATCCCGCCGTCGTTTCCTTCGTTCAACTACCGCAGCACCC
ACACTTGGTGTATGTACTGCCATCTGTTGCTTGATCTTTCGTGGACCTTC
CTATTTTCCTGTAACCCTTTAACCGCGATATGACCTACATTTTCGGTACC
TCAATACCTTGTACTTTTGCTTTTTGTGCTCGTGTCTGTTGATTGGGATG
CGACAATCACGCGCTTCCAAGGCGGCTTCGTTCCCGCGATACACGCCGCG
GCATCCATGATGGAGGCTGGCAAGGGGGGGGAGAAGGAGGACGCCAAAGC
CGTCCAGTGAGTGAATCTTGCCGAACAAGTGATTCCCGCCCTCTTTTTGG
CATGTTGTACCCAACCACAACGCCCACACCACATTGACACATGCAGCAGC
TGGCTCAACTCATCTGATGCCACAACTGGCGCGAAATCCCTCTGTTTTGT
GTGCTCTCTGCCGGCACAGGTGGTTGGAGGTGGCCATGGAGGCTGGGGAT
CCCATGGCGTACTCTACCCTCGCAACGTGGTATACAGCTGGCAGGTGATG
AAAACGGCGACAACAGAGCGTACGACCTTTCTGTTTGCTGATGTTTACCA
ATAAATAGTGCAACACGGTGGCGATAGTTGATCGAGAGAGAGCTTGGCGT
GAGAATCTTTCATCGCAACCGTTACGCGAAAACGGTGGCTGGTTAGGGAC
GGTGTACCAAGTAGCCTGATTTGTCACTGTGGTGGTAGATGCTGTAGCAC
TCTTGAACTGTCGCCGCGAAAGCTCTTCACATTTCACATACCCCGTGCTT
TCAAGTCAGAAGCTACAGGATGCATGAGCAACGCGACACCGTCACTAACA
TCAAACGTATGGGTAGAGCTGCCCCTGCAAAAGCATGTAATCGAATTGTA
CCAGAAACTTGGAACTTGCGCACAGAAATATCAAGCGCGACCACTGTCTT
GCGCGTCGTACAGCACAACAGGAAGCTCGGCTGGCGAATGCGTGTCTTGC
CACTTTCACGAGTCTATTTTTTTTTTGTCCTTTTCCATGGCGGTGTTGCA
TTATTTTCATCGTGCTATTTCTATAGGCACCATTCCTCCTACCGTCCCCC
CCCGCCGCCGTATCACTGCCTCCTGTGTGCTACTGCGGTGCAATTGCGAT
CTGACTTTGGACGCCCAACCAAATCACTCAGGGCGGGCCTAGAATTGGAT
CACAAGAAGGCTTTCGAGCTACACCTTCAGGCGGCCAACATGAACATGCC
CCGAGCGCAGTACAACACGGCCGTTCACTACCTTGAAGGAACTGGAATCG
AGCAGGTGGGAAGCGGTTTTCGTCTGTCGAGCTGATTGTGACCCGGTTAG
ACCTGCAGTCACGCCGTTTGGGCGTTCGTAACACGAAACCGCTGGTTTAC
CCATGGTTAGAAATCGTAGTTGGTGAGCCTAACGAAAATCCTCCCACCAT
CGGGGTCCGGGTATTGTTGTTTTGGGTGATAACTTGCACAGACAAATGCG
ATATGTCACACGAAACTGCAAGGCTGTGCTGCTCATTTCGGAACAGAGGT
GTGGCAAACCAGTATAGCCCACCTTTAACCCAGCTATATCCCAGCTATGA
CATGGCGACATTCCTTAACTGGAGCTAGACATTTCGATATTTTTGGGAAC
AGATATGCATTATGTTCGGTCAGGGCGAAGGAGAGACTAAGCGATTGGGC
GCAACACGATCCACCTGTCTCTCTTATGAATAGAATAGCTGCCCGGTTTT
CCTCGTCATGCCCTTCAACGAAGCCACAACACGTCTGAAACGTCACGACC
GAGCGTGCGATTTTGCAGAAAACAAAATCGTCCGAATCGTTTTTCCATTC
TTTATATTTGTCGGTTTTGTCACGTGCATATATTCAGAACCTCCCGGAAG
CGGCGGCATGGTTCGAAAGAGCGGGGGCCTTGGGGATGCCGCAGGCGATG
CTCAACCTAGGGAAAATGTTGGAGAACGTAAGTGGGTTGAGAATGAGCAG
CTGATGATGTTGTCGTTGGAACGATTACGTGTTTCCGTTTTCTTTTATGG
TGTCTTTGCTGTTCTACGAGTTTACCACGACCACCCTCCACACAAGACCT
TTGTACTTCACCTTGTTTGAACTCCGAATCAAAGTCAGCGATGTCTCCGT
GTGTAACGCTGGGAGCAGACGAATTCGAGATAATTCCTGCCAAGCAAGCA
TGCGATGAACCACAACGAAAACCCACAATCGCAATGTTCTTCCACTCATG
TGGAATGCACACAACGTTCAGGGTATCGGTGTCGAGGTGGATCGAGAGCG
AGCTTTAAAGCTGTACCAGGCGGCCTTGCGCGCCGAGGGGCAGCTGGAGG
GAGGCTTGGCGACGACCGGGGATGACACTATGGCTGCGCTGTTCGAGGCA
AAGCGAGAGGGGCTTTTGTCGGACACGAAAAAAGGGAATATCGCACCAGG
AGGCCAAACAGTCGAGCACGGTGAAGATCAAGGCGTGAGACAGCTAGGCG
AATCCTCCTCTTCTTCTTCCGAAAAGGCTTCTGCATGACACGCATGCATG
CATGAACGTCTCGAGTTGCTGCCTAGCGCACGGAGGCCATGCGCGAGACC
CGTTCATATACGAAGTGGTGCCCGTCAAAGGGACACCTATCGTGTAGCGG
CGCAGGGGTGGTAGTGAACCCCTTCTATATTCCGCGGGTGCGTAGGTTAT
CTTGCAGTATTTACGTGATAGGCCGACGGTGGCTGCTTGTAGCGACCGTA
TCGATCAACAAGTCTAATCGCAATCGGAGGCACGTTAGTGCGGGACGTTC
ATGACTTGCCGCCTTGCTGTTAGGGAGATGATGCACAGCTTGACAAAATG
ACAAGCACGGACCTGGTAACGGCGCTTCAGAAACGGCAGGCCTAGTATGC
TCTAAGTTCATACCACCCTCCCTGGTAGGGGTACAGTAGTTCCGCTGAGT
GCCGGCTGGCGTCTACCGACCCGTATGAGGGCACAG

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1047:1005..5590-

>mRNA_E-siliculosus-1a_F_contig1047.336.1 ID=mRNA_E-siliculosus-1a_F_contig1047.336.1|Name=mRNA_E-siliculosus-1a_F_contig1047.336.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2370bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1047:1005..5590- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAAGCGCGTCTTTGGTGCCGTGTCTGGCGCTTTCAGATCCCTTGTTCC
CAAGGCAACCGCGCCGGCCGCACATCACCAGGAATCGGTTCGGAAGGCGA
TGGAGTCTCTCGCGCCCCCGGGCAGGAGGTTGCCGTCCGAGAGCAAGACG
CTGGCGATGGAGCTCGTGGCAGCTGCTTCAGAGGGGGACAAGGAGAAGGA
ACTCTCGCTGAAGACCCCAGAGGAAATGTTTCTCGCTGCTAACGCTTTGC
ATCAGATGAAGCGCGTCTTTGGTGCCGTGTCTGGCGCTTTCAGATCCCTT
GTTCCCAAGGCAACCGCGCCGGCCGCACATCACCAGGAATCGGTTCGGAA
GGCGATGGAGTCTCTCGCGCCCCCGGGCAGGAGGTTGCCGTCCGAGAGCA
AGACGCTGGCGATGGAGCTCGTGGCAGCTGCTTCAGAGGGGGACAAGGAG
AAGGAACTCTCGCTGAAGACCCCAGAGGAAATGTTTCTCGCTGCTAACGC
TTTGCATCAGGGCAAACACATACCCGCGGACAAGGAGACCGCCTTTGCGC
TCTGGAAGAAAGCAGCAGAAGCCGGCCACCCCAAAGCCATGGCAAACACA
TACCCGCGGACAAGGAGACCGCCTTTGCGCTCTGGAAGAAAGCAGCAGAA
GCCGGCCACCCCAAAGCCATGTACTCGTACGCCGGCTGCTTGAGAAACGG
GGACGGCACTAAGAAAGACCTTCCCACCGCGGTGTCGCTGTTCGAGCGAT
TGGGGGACCAGGGCTTGCTTGAAGCCAAGGTACTCGTACGCCGGCTGCTT
GAGAAACGGGGACGGCACTAAGAAAGACCTTCCCACCGCGGTGTCGCTGT
TCGAGCGATTGGGGGACCAGGGCTTGCTTGAAGCCAAGCACGCGCTAGGG
CTAGTGTTGTCGTCGGGCGAGGGGGAGGATGTGGGAATCCCGCAGGACGA
GGAACGTGCGCTCGAGCTCTTCAAGGCCGCTGCTACTGCACGCGCTAGGG
CTAGTGTTGTCGTCGGGCGAGGGGGAGGATGTGGGAATCCCGCAGGACGA
GGAACGTGCGCTCGAGCTCTTCAAGGCCGCTGCTACTGGCGGCTTCGTTC
CCGCGATACACGCCGCGGCATCCATGATGGAGGCTGGCAAGGGGGGGGAG
AAGGAGGACGCCAAAGCCGTCCAGCGGCTTCGTTCCCGCGATACACGCCG
CGGCATCCATGATGGAGGCTGGCAAGGGGGGGGAGAAGGAGGACGCCAAA
GCCGTCCAGTGGTTGGAGGTGGCCATGGAGGCTGGGGATCCCATGGCGTA
CTCTACCCTCGCAACGTGGTATACAGCTGGCAGGTGGTTGGAGGTGGCCA
TGGAGGCTGGGGATCCCATGGCGTACTCTACCCTCGCAACGTGGTATACA
GCTGGCAGGGCGGGCCTAGAATTGGATCACAAGAAGGCTTTCGAGCTACA
CCTTCAGGCGGCCAACATGAACATGCCCCGAGCGCAGTACAACACGGCCG
TTCACTACCTTGAAGGAACTGGAATCGAGCAGGGCGGGCCTAGAATTGGA
TCACAAGAAGGCTTTCGAGCTACACCTTCAGGCGGCCAACATGAACATGC
CCCGAGCGCAGTACAACACGGCCGTTCACTACCTTGAAGGAACTGGAATC
GAGCAGAACCTCCCGGAAGCGGCGGCATGGTTCGAAAGAGCGGGGGCCTT
GGGGATGCCGCAGGCGATGCTCAACCTAGGGAAAATGTTGGAGAACAACC
TCCCGGAAGCGGCGGCATGGTTCGAAAGAGCGGGGGCCTTGGGGATGCCG
CAGGCGATGCTCAACCTAGGGAAAATGTTGGAGAACGGTATCGGTGTCGA
GGTGGATCGAGAGCGAGCTTTAAAGCTGTACCAGGCGGCCTTGCGCGCCG
AGGGGCAGCTGGAGGGAGGCTTGGCGACGACCGGGGATGACACTATGGCT
GCGCTGTTCGAGGCAAAGCGAGAGGGGCTTTTGTCGGACACGAAAAAAGG
GAATATCGCACCAGGAGGCCAAACAGTCGAGCACGGTGAAGATCAAGGCG
TGAGACAGCTAGGCGAATCCTCCTCTTCTTCTTCCGAAAAGGCTTCTGCA
TGAGGTATCGGTGTCGAGGTGGATCGAGAGCGAGCTTTAAAGCTGTACCA
GGCGGCCTTGCGCGCCGAGGGGCAGCTGGAGGGAGGCTTGGCGACGACCG
GGGATGACACTATGGCTGCGCTGTTCGAGGCAAAGCGAGAGGGGCTTTTG
TCGGACACGAAAAAAGGGAATATCGCACCAGGAGGCCAAACAGTCGAGCA
CGGTGAAGATCAAGGCGTGAGACAGCTAGGCGAATCCTCCTCTTCTTCTT
CCGAAAAGGCTTCTGCATGA