Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 1 |
| Cds size | 117 |
| Model size | 117 |
| Exons | 2 |
| Ec32 ortholog | Ec-10_001790.1 |
| Ec32 ortholog description | Hypothetical protein |
| Hectar predicted targeting category | no signal peptide or anchor |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927548.121821-CDS-E-siliculosus-1a_F_contig1046:32209..32270 | 1622927548.121821-CDS-E-siliculosus-1a_F_contig1046:32209..32270 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1046 32210..32270 - |
| 1696318579.7612417-CDS-E-siliculosus-1a_F_contig1046:32209..32270 | 1696318579.7612417-CDS-E-siliculosus-1a_F_contig1046:32209..32270 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1046 32210..32270 - |
| 1622927548.1367462-CDS-E-siliculosus-1a_F_contig1046:32284..32340 | 1622927548.1367462-CDS-E-siliculosus-1a_F_contig1046:32284..32340 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1046 32285..32340 - |
| 1696318579.7709343-CDS-E-siliculosus-1a_F_contig1046:32284..32340 | 1696318579.7709343-CDS-E-siliculosus-1a_F_contig1046:32284..32340 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig1046 32285..32340 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1046.334.1 >prot_E-siliculosus-1a_F_contig1046.334.1 ID=prot_E-siliculosus-1a_F_contig1046.334.1|Name=mRNA_E-siliculosus-1a_F_contig1046.334.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=39bp
GTHYTQPQHSTLPDVGGATFPDVGEGTDTDTHPQSKGG* back to topmRNA from alignment at E-siliculosus-1a_F_contig1046:32210..32340- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1046.334.1 ID=mRNA_E-siliculosus-1a_F_contig1046.334.1|Name=mRNA_E-siliculosus-1a_F_contig1046.334.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=131bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1046:32210..32340- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGAACCCACTATACCCAGCCCCAACACTCCACGCTCCCAGATGTAGGGGG
GGCGACGTGAGTTCTTAGAGCTTTCCAGATGTAGGGGAAGGTACTGACAC
TGACACGCACCCCCAGTCGAAGGGGGGGTAG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1046:32210..32340- >mRNA_E-siliculosus-1a_F_contig1046.334.1 ID=mRNA_E-siliculosus-1a_F_contig1046.334.1|Name=mRNA_E-siliculosus-1a_F_contig1046.334.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=234bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1046:32210..32340- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGAACCCACTATACCCAGCCCCAACACTCCACGCTCCCAGATGTAGGGGG
GGCGACGGAACCCACTATACCCAGCCCCAACACTCCACGCTCCCAGATGT
AGGGGGGGCGACCTTTCCAGATGTAGGGGAAGGTACTGACACTGACACGC
ACCCCCAGTCGAAGGGGGGGTAGCTTTCCAGATGTAGGGGAAGGTACTGA
CACTGACACGCACCCCCAGTCGAAGGGGGGGTAG back to top
|