prot_E-siliculosus-1a_F_contig1045.329.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1045.329.1
Unique Name	prot_E-siliculosus-1a_F_contig1045.329.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	2000

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1045.329.1 vs. uniprot
Match: A0A6H5JU62_9PHAE (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU62_9PHAE)

HSP 1 Score: 2807 bits (7277), Expect = 0.000e+0
Identity = 1713/2026 (84.55%), Postives = 1753/2026 (86.53%), Query Frame = 0

Query:    1 MREQPRDTPVSSLNPQASVFVPSAGTANPPPSSGSNINHSSSSIPVGRRNSLPDGGAGRDHVH---GEGLRGHREAPAQTISRNRQGRGAGTKTHASGRRSRSGHNGREAGERGGSTEAIEAASRSESRRRQAPSSGSAARDSIPQGAHHAPQRTHLRGSGQAPPGGRPRNRNNRRRTHTRDQRLDPAHGHGMDNPPHPPRRKRAARQNEAEASTPRGSTLRRPCARADAHTDMRRRDGTGARGRPAGVDQPGSSKEIGPIRSPVVARLGEAVPEVPPVLPSTLAEDGVEEED-EAFPALPPASGHRNAPGELLTPLQPPSGVASAAGTVGLDYSSLADRLATEAAAAAKAKAAAGSSGALGGTAVGDGFSRLSVLPSIGSGRGGEANPESTSGAILPISSDWRGLEGSSPGSMGTDGDVSRGISALPSQSPKLPSPPSRQAAAANSVTRCASAETAALRARLRDRWFRLEAARKAQRQREAAERALMTAEDCATLGSATSVLGWNGGDGNHSSAGEGMRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLPPRTVSASGMAAIRRSEVALVSASTA-TLPTGTNTPSPLNRNECSRGISAIASIPAADAELNDAAGPASCRPETTKVDSELSEEDGGRDSCGGGG-LPAVTGEHVYAACQAGMAGLLNDLLVRSGGRAADGKDKLRRTPLHLAAEAGSLECVNLLLKQGTRLPSCPRSRLARCCTQLDQXXXXXXXXXXXXXXXXNCGIVKALCAARMKVNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELLMTMANSNQAWKSS----RDDSAPYSMVAMSDPASRARGNATGKRRALQSPMNPGSSNSVRANGGKGNGVPVSALSPLHEAAASGQPETLSLLLQLGVSLEERDAAAGVGGDTPLGRAVRAGQIDCARLLLDAGAMVGRENARXXXXXXXXXXXXXXXXXXXXXXXXAPLDGGKSNGRLTGADGRAPTGPREKMMARRRVEPLELALREGQLACAAALIEGGARINERTLRAVKLEPSGTGATEDKSVAQGRQVIYAGTSPGVSHRGGGWSGNGGAGSATTPATMLPLQADMVRRLSPEVPEISDSAPPNGGGLEVDPEYDSDTLDGVSVDIREIWREKDLARGEPSAGGSKETAAEEEAATRPGRPVEYVGGLRPALGECDIELVLEDGSRLPAHSCLLAAFSGTFCDLFLRRHGRCSRRTCPATRGGSSSKRQPVPGAPEVAAETADGREMDQRTRSRDVRHLLAGHDPPGQERGVASEHQRQTSPSISEAAVAAAAFAATATVENTAWWAPAVIDWGPGRGEVSVRFWGAGIMSAVVKHVYTGQPPSNMHADGLGRLLVASVSLRMNRLIRQVEHLLSARLSPQKGKPRSLQHDEAARLLRAARVLRATDLEKRCTLYMQANGVFPAVMKLRRELVVPSLNTSDVTRGLARLSNSGYLGSGPAHAWSSSGAVSTXXXXXXXXXXXXXXXXXXXXXXXXFDQLVPLLLDTVR----CTSTLSIGHQERAVLLTAALADACPQESPRSQNEAPDPLASPQRRRPIPPNLRGCCHAVRCDGDRWNADRPAVPLVSNVSAFSHGMGWLLRTGTVADIVLVLPEQPSHSDAMPPATVIDDGEEHEKNDSGNRGNLSPGGGVGVQSSERDAHSADSAVDSPARVSSGGLVKDEGSGRPTADSTKMGWTTKDQLENSRFLAHSMVLASRSEKFAAMLRFVQRQDGDSRTYADSDDGSXXXXXXXXXXXVPEDEHRNREESPWGDVEQGLAAGHNQGEAVDNSGQDGEVSQLPRSDSRRPSPPSDRICHRRRRPRRNPAPREMELHSPLLTPQSLGLFLEFLYTGVLDTSLSTRELSELALIADEYLVPDLTRQAEALLVECL-------------ASRNAGEYLFDSTTFNGTTTIQSKREEDTASAPLELLQLGVSLALPDLSAAAARAVLLQLERVSRSEAFEESSMSKRELVMAALEAM 1999
            MRE+PRDTPVSSLNPQASVFVP AGT NP PSSG+NINHSSSSIPVG+RN+LPDGGAGRDHVH   GEGL+G REAP+QT  RNRQGRGA TKTHASG RSRSGHNGREA E GGSTEAIEAASRSE RR Q PS GSAAR SIPQ AH APQRTHLRG GQAPPGGRPRNRNNRRR HTRDQRLDPAHGHGMDNPPHPP  K AARQNEAEASTPRGSTLRRP ARADAHTDMRRR GTGARGRPAGVDQ  SSKEIGPIRSPVVARLGEAV EVPPVLPSTLAEDGV+EED EAFPALPPASG RN PGELL P+QPP  V +AAG V LDYSSL DRLA EAAAAAKA  AA SSGALGGTA GD FSRLSVLPS+GSGRGGEA P STS AILP+SSD R LEG SPGSMGTDGDVSRGISAL SQSPKLPSPPSRQA AANSVTRCASAETAALRARLRDRWFRLEAARKAQRQREAAERALMTAEDCATLGSA SVLGWNGGDGNHSSA EGMRS                         XXXXXXXXXXXXXXX                             TLP GTNT SPLN+NECSRGISAIASIPAA+AEL +AA  ASCRPETT+V +ELS EDGGR SCGGGG LPAVTGEHVYAACQAGMAGLLNDLLVRSGGRAADGKDKLRRTPLHLAAEAGSLECV+LLLKQGTRL                 XXXXXXXXXXXXXXXX                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELLMTMANSNQAWKSS    RD+SAPYSMV MS  ASRARGNATGKRRALQSPMNPGSSNS RANGGKGNGVPV ALSPLHEAAASGQPETLSLLLQLGVSLEERDAAAGVGGDTPLGRAVRAGQIDCAR+LLDAGAMVGRENARXXXXXXXXXXXXXXXXXXXXXXXXAPLDGGKSNGRLTGADGRAPTGPREKMMARRRVEPLELALREGQLACAAALIEGGA INERTLRAVKL+PSGT  TEDKSVAQGRQVIYAGTSPG S RGGGWSGNGGAGSA TPAT LPLQAD+++RLSPEVPEISDSAPP+GGGLEVDPEYD D LDGVSVDIRE WR+KDLAR EPSAGGSKETAAE EAATRPGRPVEYVGGLRP LGECDI+LVLEDGSRLPAHSCLLAAFSGTFCDLFLRRHGRCSRRTCPA RGG+ SKRQPVPGA EVAA  ADGREMDQRTRSRDV HLLAGHDPPGQ R   SEHQRQTSPSISEAAVAAAAFAATATVENTAWWAP VIDWGPGRGEVSVRFWGAG MSAVVKHVYTGQPPSNMHADGLGRLLVASVSLRMNRLIRQVEHLLS RL+PQKGK RSLQH EAARLLRAARVLRATDLEKRCTLYMQANGVFPAVMKLRRELVVPSLNT DVTRGLARLSNSGYLGSGPA+AWSSSGAVST                        FDQLVPLLLDTVR    CTSTLSIG QERAVLLTAALADACPQESPRSQN+APDPLA+PQRRRPIPPNLRGCC AVRCDGDRWNADRPAVPLVSNVSAFSHGMGWLLRTGTVAD+VLVLPEQPSHSDAMPPATVI+DGEE EKN SGNR NLSPGG VGVQSSER AHSADSAVDSPARVS GG VKDEGSGRP  DS KM  TTKDQL NSRFLAHSMVLASRSEKF+AMLRFVQ QDG+SRTYADS DGS            PE EHRNREE PWGDVEQG AAGHNQGEAVDN G+DGEVSQ PR DSRRPSPPSDR CH RRRPRRN APREMELHSP+LTPQSLGLFLEFLYTGVLDTSLSTRELSELALIADEYLVPDL RQAEALLVECL             ASRNAG+Y FDSTTFNGTTT+QSKREEDT SAPLELLQLGVSLALPDLSAAAARAVLLQLERVSRSEAFE+SSMSKRELVMAALEAM
Sbjct:   60 MREKPRDTPVSSLNPQASVFVPPAGTVNPLPSSGNNINHSSSSIPVGQRNNLPDGGAGRDHVHDVHGEGLKGCREAPSQTRRRNRQGRGADTKTHASGGRSRSGHNGREAVEGGGSTEAIEAASRSEGRRTQTPS-GSAARYSIPQDAHRAPQRTHLRGPGQAPPGGRPRNRNNRRRAHTRDQRLDPAHGHGMDNPPHPPHPKPAARQNEAEASTPRGSTLRRPRARADAHTDMRRRGGTGARGRPAGVDQSASSKEIGPIRSPVVARLGEAVSEVPPVLPSTLAEDGVDEEDDEAFPALPPASGPRNTPGELLAPVQPPPVVTAAAGHVALDYSSLKDRLAIEAAAAAKA--AAESSGALGGTAEGDDFSRLSVLPSVGSGRGGEAKPGSTSSAILPVSSDLRVLEGCSPGSMGTDGDVSRGISALQSQSPKLPSPPSRQAVAANSVTRCASAETAALRARLRDRWFRLEAARKAQRQREAAERALMTAEDCATLGSAASVLGWNGGDGNHSSAEEGMRSGSGENHDEGEAKGRRASSSHTAMTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLPMGTNTSSPLNQNECSRGISAIASIPAAEAELIEAAETASCRPETTQVGAELSGEDGGRASCGGGGGLPAVTGEHVYAACQAGMAGLLNDLLVRSGGRAADGKDKLRRTPLHLAAEAGSLECVSLLLKQGTRLXX---------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELLMTMANSNQAWKSSAPSSRDNSAPYSMVVMSGQASRARGNATGKRRALQSPMNPGSSNSARANGGKGNGVPVPALSPLHEAAASGQPETLSLLLQLGVSLEERDAAAGVGGDTPLGRAVRAGQIDCARILLDAGAMVGRENARXXXXXXXXXXXXXXXXXXXXXXXXAPLDGGKSNGRLTGADGRAPTGPREKMMARRRVEPLELALREGQLACAAALIEGGAHINERTLRAVKLQPSGTEVTEDKSVAQGRQVIYAGTSPGESRRGGGWSGNGGAGSAGTPATTLPLQADILQRLSPEVPEISDSAPPDGGGLEVDPEYDCDMLDGVSVDIRETWRDKDLARREPSAGGSKETAAEGEAATRPGRPVEYVGGLRPTLGECDIDLVLEDGSRLPAHSCLLAAFSGTFCDLFLRRHGRCSRRTCPAARGGNYSKRQPVPGASEVAAAAADGREMDQRTRSRDVHHLLAGHDPPGQGRSATSEHQRQTSPSISEAAVAAAAFAATATVENTAWWAPPVIDWGPGRGEVSVRFWGAGTMSAVVKHVYTGQPPSNMHADGLGRLLVASVSLRMNRLIRQVEHLLSDRLAPQKGKARSLQHAEAARLLRAARVLRATDLEKRCTLYMQANGVFPAVMKLRRELVVPSLNTLDVTRGLARLSNSGYLGSGPAYAWSSSGAVSTSSASATVAAAKLAVDLSLRKRAVDFDQLVPLLLDTVRFITWCTSTLSIGRQERAVLLTAALADACPQESPRSQNDAPDPLAAPQRRRPIPPNLRGCCDAVRCDGDRWNADRPAVPLVSNVSAFSHGMGWLLRTGTVADVVLVLPEQPSHSDAMPPATVIEDGEEDEKNYSGNRENLSPGGRVGVQSSERGAHSADSAVDSPARVSPGGPVKDEGSGRPATDSRKMEGTTKDQLVNSRFLAHSMVLASRSEKFSAMLRFVQGQDGNSRTYADSVDGSSTDDDIFTDADTPEREHRNREEPPWGDVEQGEAAGHNQGEAVDNIGKDGEVSQPPRIDSRRPSPPSDRRCHCRRRPRRNTAPREMELHSPILTPQSLGLFLEFLYTGVLDTSLSTRELSELALIADEYLVPDLIRQAEALLVECLVRRGDVRYSLQVTASRNAGDYSFDSTTFNGTTTVQSKREEDTESAPLELLQLGVSLALPDLSAAAARAVLLQLERVSRSEAFEQSSMSKRELVMAALEAM 2067

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1045.329.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1045.329.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JU62_9PHAE	0.000e+0	84.55	BTB domain-containing protein n=2 Tax=Ectocarpus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 469..489
None	No IPR available	PANTHER	PTHR24193	ANKYRIN REPEAT PROTEIN	coord: 964..1048 coord: 894..987 coord: 659..844 coord: 478..716
IPR000210	BTB/POZ domain	SMART	SM00225	BTB_4	coord: 1718..1912 e-value: 8.4E-6 score: 35.3 coord: 1199..1402 e-value: 3.0E-4 score: 30.1
IPR000210	BTB/POZ domain	PROSITE	PS50097	BTB	coord: 1199..1229 score: 9.558
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 928..957 e-value: 0.091 score: 21.9 coord: 891..920 e-value: 0.24 score: 20.5 coord: 773..802 e-value: 0.46 score: 19.5 coord: 1016..1045 e-value: 31.0 score: 13.5 coord: 740..769 e-value: 1.0 score: 18.4 coord: 961..990 e-value: 1.1 score: 18.2 coord: 692..721 e-value: 0.0019 score: 27.5 coord: 806..836 e-value: 1700.0 score: 3.3
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 773..805 score: 9.484
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 692..724 score: 10.446
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 961..993 score: 9.912
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 891..923 score: 11.22
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 740..772 score: 9.11
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 928..960 score: 10.526
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 665..770 e-value: 1.1E-11 score: 45.1 coord: 896..986 e-value: 1.8E-10 score: 41.3
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 662..996 score: 45.042
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 656..868 e-value: 8.7E-32 score: 112.5
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 879..1063 e-value: 8.3E-27 score: 95.9
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 688..986
IPR011333	SKP1/BTB/POZ domain superfamily	SUPERFAMILY	54695	POZ domain	coord: 1199..1400
IPR011333	SKP1/BTB/POZ domain superfamily	SUPERFAMILY	54695	POZ domain	coord: 1725..1910

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1045	contig	E-siliculosus-1a_F_contig1045:11160..21625 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1045.329.1	mRNA_E-siliculosus-1a_F_contig1045.329.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1045 11093..21864 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1045.329.1 ID=prot_E-siliculosus-1a_F_contig1045.329.1|Name=mRNA_E-siliculosus-1a_F_contig1045.329.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=2000bp
MREQPRDTPVSSLNPQASVFVPSAGTANPPPSSGSNINHSSSSIPVGRRN
SLPDGGAGRDHVHGEGLRGHREAPAQTISRNRQGRGAGTKTHASGRRSRS
GHNGREAGERGGSTEAIEAASRSESRRRQAPSSGSAARDSIPQGAHHAPQ
RTHLRGSGQAPPGGRPRNRNNRRRTHTRDQRLDPAHGHGMDNPPHPPRRK
RAARQNEAEASTPRGSTLRRPCARADAHTDMRRRDGTGARGRPAGVDQPG
SSKEIGPIRSPVVARLGEAVPEVPPVLPSTLAEDGVEEEDEAFPALPPAS
GHRNAPGELLTPLQPPSGVASAAGTVGLDYSSLADRLATEAAAAAKAKAA
AGSSGALGGTAVGDGFSRLSVLPSIGSGRGGEANPESTSGAILPISSDWR
GLEGSSPGSMGTDGDVSRGISALPSQSPKLPSPPSRQAAAANSVTRCASA
ETAALRARLRDRWFRLEAARKAQRQREAAERALMTAEDCATLGSATSVLG
WNGGDGNHSSAGEGMRSGSDENHDGGEAKDRRDSSAHTTMTSATAASSSA
VRGASVSPLPPRTVSASGMAAIRRSEVALVSASTATLPTGTNTPSPLNRN
ECSRGISAIASIPAADAELNDAAGPASCRPETTKVDSELSEEDGGRDSCG
GGGLPAVTGEHVYAACQAGMAGLLNDLLVRSGGRAADGKDKLRRTPLHLA
AEAGSLECVNLLLKQGTRLPSCPRSRLARCCTQLDQRDRWRETPLHKAAR
SGNCGIVKALCAARMKVNVRNRHRETPLLLAVRSNSADAVAVLLGFGARL
DEPDVHGVTPVVQAARSGQAELLMTMANSNQAWKSSRDDSAPYSMVAMSD
PASRARGNATGKRRALQSPMNPGSSNSVRANGGKGNGVPVSALSPLHEAA
ASGQPETLSLLLQLGVSLEERDAAAGVGGDTPLGRAVRAGQIDCARLLLD
AGAMVGRENARGETPLVVAIRAGQASAVELLSQHGAPLDGGKSNGRLTGA
DGRAPTGPREKMMARRRVEPLELALREGQLACAAALIEGGARINERTLRA
VKLEPSGTGATEDKSVAQGRQVIYAGTSPGVSHRGGGWSGNGGAGSATTP
ATMLPLQADMVRRLSPEVPEISDSAPPNGGGLEVDPEYDSDTLDGVSVDI
REIWREKDLARGEPSAGGSKETAAEEEAATRPGRPVEYVGGLRPALGECD
IELVLEDGSRLPAHSCLLAAFSGTFCDLFLRRHGRCSRRTCPATRGGSSS
KRQPVPGAPEVAAETADGREMDQRTRSRDVRHLLAGHDPPGQERGVASEH
QRQTSPSISEAAVAAAAFAATATVENTAWWAPAVIDWGPGRGEVSVRFWG
AGIMSAVVKHVYTGQPPSNMHADGLGRLLVASVSLRMNRLIRQVEHLLSA
RLSPQKGKPRSLQHDEAARLLRAARVLRATDLEKRCTLYMQANGVFPAVM
KLRRELVVPSLNTSDVTRGLARLSNSGYLGSGPAHAWSSSGAVSTSSASA
TVAAAKRAVDLSLRKRAVDFDQLVPLLLDTVRCTSTLSIGHQERAVLLTA
ALADACPQESPRSQNEAPDPLASPQRRRPIPPNLRGCCHAVRCDGDRWNA
DRPAVPLVSNVSAFSHGMGWLLRTGTVADIVLVLPEQPSHSDAMPPATVI
DDGEEHEKNDSGNRGNLSPGGGVGVQSSERDAHSADSAVDSPARVSSGGL
VKDEGSGRPTADSTKMGWTTKDQLENSRFLAHSMVLASRSEKFAAMLRFV
QRQDGDSRTYADSDDGSSTDDDFSTDTDVPEDEHRNREESPWGDVEQGLA
AGHNQGEAVDNSGQDGEVSQLPRSDSRRPSPPSDRICHRRRRPRRNPAPR
EMELHSPLLTPQSLGLFLEFLYTGVLDTSLSTRELSELALIADEYLVPDL
TRQAEALLVECLASRNAGEYLFDSTTFNGTTTIQSKREEDTASAPLELLQ
LGVSLALPDLSAAAARAVLLQLERVSRSEAFEESSMSKRELVMAALEAM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011333	SKP1/BTB/POZ_sf
IPR036770	Ankyrin_rpt-contain_sf
IPR020683	Ankyrin_rpt-contain_dom
IPR002110	Ankyrin_rpt
IPR000210	BTB/POZ_dom