mRNA_E-siliculosus-1a_F_contig1041.317.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1041.317.1
Unique NamemRNA_E-siliculosus-1a_F_contig1041.317.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match: D7G282_ECTSI (3-isopropylmalate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G282_ECTSI)

HSP 1 Score: 821 bits (2120), Expect = 2.710e-297
Identity = 423/427 (99.06%), Postives = 425/427 (99.53%), Query Frame = 1
Query:   25 MSRCGVLAGFVGLAGLIEQAQAFVGSPALRARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEELAKLVAAGAGAEAAAVGEAAAAR 1305
            MSRCGVLAG VGLAGLIEQAQAFVGSP LRARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDST+ALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYAT+DIQREGTTAVGCKEMGDKVKEELAKLVAAGAGAEAAAVGEAAAAR
Sbjct:    1 MSRCGVLAGVVGLAGLIEQAQAFVGSPVLRARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDSTLALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATNDIQREGTTAVGCKEMGDKVKEELAKLVAAGAGAEAAAVGEAAAAR 427          
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match: A0A835ZK29_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK29_9STRA)

HSP 1 Score: 598 bits (1543), Expect = 6.840e-210
Identity = 300/379 (79.16%), Postives = 332/379 (87.60%), Query Frame = 1
Query:  118 RAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSED-YPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEELAKLV 1251
            RA   + S  L M    KDSY + LLPGDGIGPEIT ATV A++P   LFK+ FKEALIGGAAIDA GSP+PD+T    KASDS+LL+AIGGPKWDGNPRE RPETGLLAMR  LGLFANLRPAKV+++L+DAS+LKPEIV+GVDIMVVRELTGDVYFGTPKGI+   SGER GYNNMIY+EHEVERIA+VA+DVA KRGKR+CSVDKANVLDVSQLWRDVVI++ +D YP+VELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+GNP GPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRP EAD++E AVD V+D+GYAT DI R+G   VGCKEMG +V E L KL+
Sbjct:   28 RAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL 406          
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match: A0A6V1T6U9_HETAK (3-isopropylmalate dehydrogenase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T6U9_HETAK)

HSP 1 Score: 525 bits (1352), Expect = 5.980e-181
Identity = 277/397 (69.77%), Postives = 320/397 (80.60%), Query Frame = 1
Query:   70 LIEQAQAFVGSPALRARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSL-FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEELAKLVAA 1257
            +++ A AFVG+P + AR      S +  M  E KDSYD+ LL GDGIGPEIT ATV AL PL+ L FK+NFKEALIGGAA+DA   P+PD ++   K SDS+LL+ IGG KWD NPRELRPETGLL MR ++GLFANLRPAKV+ +L+ AS+LK E++EGVDIMVVRELTGDVYFGTPKG  E   G+RV YNNMIY E E+ RIAKVA+DVAMKRGK + S+DKANVLDVSQLWRDVVI+ S++YPEVEL H Y+DNAAMQLIRWPKQFD +V GN+FGDI+SDEASMLVGSLGMLPSAS+G+P GPGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL R  EA M+E AV+ V+D    T DI   G   VGCK+MG    EE+AKLVAA
Sbjct:   11 ILQIANAFVGTPLMGARG-----SARTFMAVEKKDSYDITLLTGDGIGPEITQATVAALAPLEKLGFKMNFKEALIGGAALDAVNHPFPDESLEQCKGSDSVLLSCIGGYKWDKNPRELRPETGLLRMRKEMGLFANLRPAKVIPQLMGASTLKEEVLEGVDIMVVRELTGDVYFGTPKGT-ETRDGKRVAYNNMIYDEEEIRRIAKVAFDVAMKRGKNVYSIDKANVLDVSQLWRDVVIEESKNYPEVELNHMYIDNAAMQLIRWPKQFDTIVCGNLFGDIISDEASMLVGSLGMLPSASIGDPSGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSRAEEAQMLEDAVEQVLDI-CRTVDIAGGGLPTVGCKQMG----EEVAKLVAA 396          
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match: A0A7S0Z0Z5_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z0Z5_9CRYP)

HSP 1 Score: 515 bits (1327), Expect = 1.500e-177
Identity = 264/378 (69.84%), Postives = 306/378 (80.95%), Query Frame = 1
Query:  112 RARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSL--FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEEL 1239
            R RA S S    +SM  + KD Y +  LPGDGIGPEI A  + A + +     F++ +KEALIGGAA+DA   P PD+T+   +ASDS LLAAIGGPKWD NPRELRPETGLL MR +LGLFANLRPA V+ +LVDAS+LKPE+++GVDIMVVRELTGDVYFG PKGI+E   GER G+NNM Y E E+ RIAKVA+D+AMKRGK++CSVDKANVLDVSQLWRDVVI+ +  YPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+G+P GPGV+EPCHGSAPDIAG DKANPLA ILSAAMM RYDL RP  AD +EAAV+  +D G  T D+  E T  +GCK+MG++V + +
Sbjct:    9 RVRAHSTS----VSMAVKKKDKYTITTLPGDGIGPEIIAGAITACDAVAKKQGFEIEWKEALIGGAALDAHNDPCPDATLDQMRASDSCLLAAIGGPKWDKNPRELRPETGLLKMRKELGLFANLRPATVLDQLVDASTLKPEVIKGVDIMVVRELTGDVYFGAPKGIEER-DGERFGFNNMCYKESEIRRIAKVAFDLAMKRGKKVCSVDKANVLDVSQLWRDVVIEEAAAYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGDPSGPGVYEPCHGSAPDIAGTDKANPLATILSAAMMFRYDLDRPEAADALEAAVNKALDDGLRTADLATENT--IGCKQMGEEVAKRV 379          
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match: A0A7S1G2F4_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G2F4_9STRA)

HSP 1 Score: 510 bits (1313), Expect = 5.790e-175
Identity = 269/365 (73.70%), Postives = 301/365 (82.47%), Query Frame = 1
Query:  172 DSYDVMLLPGDGIGPEITAATVNALEPLQSL--FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELP-SGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIK-MSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQ--REGTTAVGCKEMGDKVKEELAKL 1248
            +SY V +L GDGIGPEI+ AT   L  L     F+L  K ALIGG AIDA  SP+PD ++A  ++SDS+LLA IGGPKWDGNPRELRPE+GLL MR ++GLFANLRPAKVM +LVDAS+LK EIVEGVD+MVVRELTGDVYFG PKGID  P +GERVGYNNMIY E EV RIAKVA DVAMKRGK+LCSVDKANVLDVSQLWRDV I  M +DYPEV+L+H YVDNAAMQLIRWPKQFD +VTGNIFGDILSDEASMLVGSLGMLPSAS+G  +GPGVFEP HGSAPDIAGQD ANPLAMILSAAMMLRYDL RP EAD++E AV+ V+DKG  T DI+   +G   VGC EMGD V E +A +
Sbjct:   46 ESYSVTILEGDGIGPEISTATKKVLAALTKRCGFELELKPALIGGCAIDAANSPFPDESLAQCRSSDSVLLACIGGPKWDGNPRELRPESGLLKMRKEMGLFANLRPAKVMSQLVDASTLKREIVEGVDVMVVRELTGDVYFGAPKGIDTDPVTGERVGYNNMIYSESEVRRIAKVAGDVAMKRGKKLCSVDKANVLDVSQLWRDVTIDVMEKDYPEVDLSHMYVDNAAMQLIRWPKQFDTIVTGNIFGDILSDEASMLVGSLGMLPSASIGL-EGPGVFEPIHGSAPDIAGQDVANPLAMILSAAMMLRYDLARPEEADILERAVEAVLDKGIRTADIKFDGDGCRLVGCVEMGDTVAEIVATV 409          
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match: A0A7S2RSG3_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSG3_9STRA)

HSP 1 Score: 509 bits (1312), Expect = 1.250e-174
Identity = 259/367 (70.57%), Postives = 296/367 (80.65%), Query Frame = 1
Query:  169 KDSYDVMLLPGDGIGPEITAATVNALEPLQSL---FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGT--TAVGCKEMGDKVKEELAKLVA 1254
            K+   + LLPGDGIGPEIT ATV  LE L         +F EALIGGAA+DA   P+P+ T+   ++SDS+LLA IGGPKWDGNPR+ RPETGLLAMR  +GLFANLRPAKV+ +LVDAS+LK EIVEGVDIMVVRELTGDVYFG PKGID L  GERVGYNNMIY E E++RIA+VAYDV++KR K+LCS+DKANVLDVSQLWRD V  +  ++P+VEL+H YVDNAAMQLIRWPKQFD +V GNIFGDILSDEASMLVGSLGMLPSAS+G P  PGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL RP EAD++E AV+ V+D    T DI +EG   T VGC  MGD V   + +L A
Sbjct:   55 KEVSKITLLPGDGIGPEITVATVKVLETLAECKGDLSFDFNEALIGGAALDAVDDPFPEETLNSCQSSDSVLLACIGGPKWDGNPRDKRPETGLLAMRKNMGLFANLRPAKVLPQLVDASTLKREIVEGVDIMVVRELTGDVYFGEPKGIDTLEDGERVGYNNMIYKESEIDRIARVAYDVSLKRRKQLCSIDKANVLDVSQLWRDKVTSIGAEFPDVELSHMYVDNAAMQLIRWPKQFDTIVCGNIFGDILSDEASMLVGSLGMLPSASLGEPSSPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLARPDEADILEKAVEKVLDSDVRTADIYQEGEGQTMVGCSAMGDAVCSAVKELFA 421          
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match: A0A7S0N7T0_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N7T0_9CRYP)

HSP 1 Score: 503 bits (1295), Expect = 1.100e-172
Identity = 264/378 (69.84%), Postives = 301/378 (79.63%), Query Frame = 1
Query:  112 RARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSL--FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEEL 1239
            R + FS  TS +  M    KDSYDV LLPGDGIGPEI  A V A + + +   F +NFKEALIGGAA+DA   P PD T+   KASDS+LLAAIGGPKWD NPRELRPETGLL MR  LGLFANLRPA V+ +L+DAS+LKPE+V GVDIMVVRELTGDVYFG PKGI     GER G+NNM Y E EV RIAKVA+D+A KRG ++CSVDKANVLDVSQLWRDVVI+    YP+VEL+H YVDNAAMQLIR PKQFDV+VTGNIFGDILSDEASMLVGSLGMLPSAS+G+  GPGVFEPCHGSAPDIAGQDKANPLA ILSAAMM RYDL RP  A+ +E AV+ V+D G  T D+ RE T  +GC++MG++V + +
Sbjct:    8 RGQRFSGLTSSR--MAVSRKDSYDVTLLPGDGIGPEIIKAAVVACKAVAAKQGFTINFKEALIGGAALDAHNDPLPDVTLKQMKASDSVLLAAIGGPKWDKNPRELRPETGLLRMRKALGLFANLRPATVLPQLIDASTLKPEVVAGVDIMVVRELTGDVYFGEPKGIT-TKDGERFGFNNMCYKESEVRRIAKVAFDIASKRGNKVCSVDKANVLDVSQLWRDVVIEEHAKYPKVELSHMYVDNAAMQLIRNPKQFDVIVTGNIFGDILSDEASMLVGSLGMLPSASVGDRSGPGVFEPCHGSAPDIAGQDKANPLATILSAAMMFRYDLDRPEAAEALERAVNKVLDDGLRTADLARENT--IGCRQMGEEVAKRV 380          
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match: A0A7S0F2Y7_9CRYP (3-isopropylmalate dehydrogenase n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0F2Y7_9CRYP)

HSP 1 Score: 503 bits (1294), Expect = 4.070e-172
Identity = 268/387 (69.25%), Postives = 300/387 (77.52%), Query Frame = 1
Query:  109 LRARAFSPSTSH------------KLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSL--FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKV 1227
            L A AFSP +S              LSM  + KDSY V  LPGDGIGPEI AATV   + + +   FK+ FKEALIGGAA+DA   P+PD T+   K+SDS+LLAAIGGPKWD NPR+ RPETGLL MR  LGLFANLRPA V+ +L DAS+LKPE+V GVDIMVVRELTGDVYFG PKGI     GER GYNNM Y E EV RIAKVA+D+A KRGKR+CSVDKANVLDVSQLWRDVVI+  +DYP+VEL+H YVDNAAMQLIR PKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+G+P GPGVFEP HGSAPDIAG DKANPLA ILSAAMM RYDL RP  A  +E AV+ V+D G  T D+  +    VGCK+MGD+V
Sbjct:   22 LVAEAFSPLSSFGRVQRRQASYVSSLSMAVKKKDSYFVTTLPGDGIGPEIMAATVKVCQAVAAKQGFKMEFKEALIGGAALDACNDPFPDETLKQMKSSDSVLLAAIGGPKWDANPRDKRPETGLLKMRKSLGLFANLRPATVLPQLADASTLKPEVVSGVDIMVVRELTGDVYFGEPKGIT-TKDGERFGYNNMCYKESEVRRIAKVAFDIARKRGKRVCSVDKANVLDVSQLWRDVVIETHKDYPDVELSHMYVDNAAMQLIRNPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGDPSGPGVFEPIHGSAPDIAGTDKANPLATILSAAMMFRYDLDRPDAAQAIEDAVNKVLDDGVRTGDLGGK----VGCKQMGDEV 403          
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match: A0A7S2V595_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V595_9STRA)

HSP 1 Score: 502 bits (1293), Expect = 5.180e-172
Identity = 256/370 (69.19%), Postives = 302/370 (81.62%), Query Frame = 1
Query:  145 KLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSL-FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEELAKLV 1251
            +++M    K SYDV LL GDGIGPEIT A + A++PL+ + F +NFK+ALIGG AID    P+PD ++   + SDS+LLA IGG KWD NPR LRPETGLL MR ++ LFANLRPAKV+ +L+ AS+LKPE++EGVDIMVVRELTGDVYFG PKG      G+RVGYNNMIY E E+ RIAKVA+DVAMKRGK++ S+DKANVLDVSQLWRDVV + S++YPEV+L H  VDNAAMQLIRWPKQFD +V GN+FGDILSDEASMLVGSLGMLPSAS+GNP+ PGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL RP  AD++EAAV+ V+D  Y T DI  +G   +GCK+MG    EE+AKLV
Sbjct:   22 QITMAVGKKASYDVTLLKGDGIGPEITDAAIVAMKPLEQMGFTMNFKDALIGGIAIDEVNDPFPDESLKQCQESDSVLLACIGGYKWDKNPRHLRPETGLLKMRKEMDLFANLRPAKVLPQLLGASTLKPEVLEGVDIMVVRELTGDVYFGQPKGTMTDEDGQRVGYNNMIYSEGEITRIAKVAFDVAMKRGKKVHSIDKANVLDVSQLWRDVVTEESQNYPEVDLQHMLVDNAAMQLIRWPKQFDTVVCGNLFGDILSDEASMLVGSLGMLPSASIGNPENPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLARPEAADILEAAVEEVLDT-YRTGDIAADGFELIGCKKMG----EEVAKLV 386          
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match: A0A7S2P3R3_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P3R3_9STRA)

HSP 1 Score: 500 bits (1287), Expect = 2.550e-171
Identity = 258/361 (71.47%), Postives = 299/361 (82.83%), Query Frame = 1
Query:  160 TEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLF--KLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSE-DYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTA--VGCKEMGDKV 1227
            T  KDSYD+ LLPGDGIGPEIT AT   L+ L   F  KLN KEALIGGAAIDA+  P+PD ++    + DS+LLA IGG KWD NPRELRPETGLL MR ++GLFANLRPA V+ +L+DAS+LK E+VEGVD+MVVRELTGDVYFGTPKGID +  GERVGYNNMIY E E++RIA+VA DVA KRG +LCSVDKANVLDVSQLWR+VV  + E ++P+VEL+H YVDNAAMQLIRWPKQFD +V GNIFGDILSDEASMLVGSLGMLPSAS+G  DGPGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL RP EA ++E AV+  +++G  T DI++EG     +GC EMG++V
Sbjct:   14 TSKKDSYDITLLPGDGIGPEITTATTKVLQTLTERFNFKLNLKEALIGGAAIDAKNDPFPDESLQQCLSGDSVLLACIGGYKWDNNPRELRPETGLLKMRKEMGLFANLRPAVVLDQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIDVV-DGERVGYNNMIYSESEIKRIARVAGDVASKRGGKLCSVDKANVLDVSQLWREVVTDICEKEFPDVELSHMYVDNAAMQLIRWPKQFDTIVCGNIFGDILSDEASMLVGSLGMLPSASIGE-DGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLDRPHEALVLEKAVEEALEQGLRTADIKQEGDGCKLIGCVEMGEQV 372          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G282_ECTSI2.710e-29799.063-isopropylmalate dehydrogenase n=2 Tax=Ectocarpus... [more]
A0A835ZK29_9STRA6.840e-21079.163-isopropylmalate dehydrogenase n=1 Tax=Tribonema ... [more]
A0A6V1T6U9_HETAK5.980e-18169.773-isopropylmalate dehydrogenase n=1 Tax=Heterosigm... [more]
A0A7S0Z0Z5_9CRYP1.500e-17769.843-isopropylmalate dehydrogenase n=1 Tax=Hemiselmis... [more]
A0A7S1G2F4_9STRA5.790e-17573.703-isopropylmalate dehydrogenase n=1 Tax=Corethron ... [more]
A0A7S2RSG3_9STRA1.250e-17470.573-isopropylmalate dehydrogenase n=1 Tax=Rhizochrom... [more]
A0A7S0N7T0_9CRYP1.100e-17269.843-isopropylmalate dehydrogenase n=1 Tax=Cryptomona... [more]
A0A7S0F2Y7_9CRYP4.070e-17269.253-isopropylmalate dehydrogenase n=3 Tax=Geminigera... [more]
A0A7S2V595_9STRA5.180e-17269.193-isopropylmalate dehydrogenase n=1 Tax=Fibrocapsa... [more]
A0A7S2P3R3_9STRA2.550e-17171.473-isopropylmalate dehydrogenase n=1 Tax=Leptocylin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1041contigE-siliculosus-1a_F_contig1041:6874..14007 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1284
Model size1741
Exons10
Ec32 orthologEc-16_002120.1
Ec32 ortholog description3-isopropylmalate dehydrogenase
Hectar predicted targeting categorychloroplast
BRITEbr01601,ko00000,ko00001,ko00002,ko01000,ko04121
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.CE
EC1.1.1.85
EggNOG OGsCOG0473@1,KOG0786@2759
EggNOG free text desc.3-isopropylmalate dehydrogenase activity
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006790,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009651,GO:0009941,GO:0009987,GO:0016143,GO:0016144,GO:0019748,GO:0019757,GO:0019758,GO:0019760,GO:0019761,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044249,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0050896,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
KEGG ModuleM00432,M00535
KEGG Pathwayko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230
KEGG ReactionR00994,R04426,R08621,R08625,R08629,R08636,R08642,R08646,R10052
KEGG koko:K00052,ko:K21360,ko:K22382
KEGG rclassRC00084,RC00114,RC00417,RC03036
Seed eggNOG ortholog2880.D7G282
Seed ortholog evalue2.9e-235
Seed ortholog score820.8
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1041.317.1prot_E-siliculosus-1a_F_contig1041.317.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1041 7307..13983 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927545.0574684-UTR-E-siliculosus-1a_F_contig1041:6873..73061622927545.0574684-UTR-E-siliculosus-1a_F_contig1041:6873..7306Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1041 6874..7306 -
1696318577.569789-UTR-E-siliculosus-1a_F_contig1041:6873..73061696318577.569789-UTR-E-siliculosus-1a_F_contig1041:6873..7306Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1041 6874..7306 -
1622927545.2337067-UTR-E-siliculosus-1a_F_contig1041:13983..140071622927545.2337067-UTR-E-siliculosus-1a_F_contig1041:13983..14007Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1041 13984..14007 -
1696318577.6682556-UTR-E-siliculosus-1a_F_contig1041:13983..140071696318577.6682556-UTR-E-siliculosus-1a_F_contig1041:13983..14007Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1041 13984..14007 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927545.0723577-CDS-E-siliculosus-1a_F_contig1041:7306..75581622927545.0723577-CDS-E-siliculosus-1a_F_contig1041:7306..7558Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 7307..7558 -
1696318577.5798526-CDS-E-siliculosus-1a_F_contig1041:7306..75581696318577.5798526-CDS-E-siliculosus-1a_F_contig1041:7306..7558Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 7307..7558 -
1622927545.0853238-CDS-E-siliculosus-1a_F_contig1041:7970..80901622927545.0853238-CDS-E-siliculosus-1a_F_contig1041:7970..8090Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 7971..8090 -
1696318577.5875802-CDS-E-siliculosus-1a_F_contig1041:7970..80901696318577.5875802-CDS-E-siliculosus-1a_F_contig1041:7970..8090Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 7971..8090 -
1622927545.097077-CDS-E-siliculosus-1a_F_contig1041:8356..85271622927545.097077-CDS-E-siliculosus-1a_F_contig1041:8356..8527Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 8357..8527 -
1696318577.5977702-CDS-E-siliculosus-1a_F_contig1041:8356..85271696318577.5977702-CDS-E-siliculosus-1a_F_contig1041:8356..8527Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 8357..8527 -
1622927545.1104908-CDS-E-siliculosus-1a_F_contig1041:8914..90101622927545.1104908-CDS-E-siliculosus-1a_F_contig1041:8914..9010Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 8915..9010 -
1696318577.6057117-CDS-E-siliculosus-1a_F_contig1041:8914..90101696318577.6057117-CDS-E-siliculosus-1a_F_contig1041:8914..9010Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 8915..9010 -
1622927545.1206732-CDS-E-siliculosus-1a_F_contig1041:9467..95331622927545.1206732-CDS-E-siliculosus-1a_F_contig1041:9467..9533Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 9468..9533 -
1696318577.6132786-CDS-E-siliculosus-1a_F_contig1041:9467..95331696318577.6132786-CDS-E-siliculosus-1a_F_contig1041:9467..9533Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 9468..9533 -
1622927545.1650004-CDS-E-siliculosus-1a_F_contig1041:10341..104521622927545.1650004-CDS-E-siliculosus-1a_F_contig1041:10341..10452Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 10342..10452 -
1696318577.621349-CDS-E-siliculosus-1a_F_contig1041:10341..104521696318577.621349-CDS-E-siliculosus-1a_F_contig1041:10341..10452Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 10342..10452 -
1622927545.1805801-CDS-E-siliculosus-1a_F_contig1041:11123..112581622927545.1805801-CDS-E-siliculosus-1a_F_contig1041:11123..11258Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 11124..11258 -
1696318577.628969-CDS-E-siliculosus-1a_F_contig1041:11123..112581696318577.628969-CDS-E-siliculosus-1a_F_contig1041:11123..11258Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 11124..11258 -
1622927545.1964235-CDS-E-siliculosus-1a_F_contig1041:11568..116401622927545.1964235-CDS-E-siliculosus-1a_F_contig1041:11568..11640Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 11569..11640 -
1696318577.636404-CDS-E-siliculosus-1a_F_contig1041:11568..116401696318577.636404-CDS-E-siliculosus-1a_F_contig1041:11568..11640Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 11569..11640 -
1622927545.2106416-CDS-E-siliculosus-1a_F_contig1041:12351..124891622927545.2106416-CDS-E-siliculosus-1a_F_contig1041:12351..12489Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 12352..12489 -
1696318577.6476696-CDS-E-siliculosus-1a_F_contig1041:12351..124891696318577.6476696-CDS-E-siliculosus-1a_F_contig1041:12351..12489Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 12352..12489 -
1622927545.2220714-CDS-E-siliculosus-1a_F_contig1041:13860..139831622927545.2220714-CDS-E-siliculosus-1a_F_contig1041:13860..13983Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 13861..13983 -
1696318577.6546688-CDS-E-siliculosus-1a_F_contig1041:13860..139831696318577.6546688-CDS-E-siliculosus-1a_F_contig1041:13860..13983Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 13861..13983 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1041.317.1

>prot_E-siliculosus-1a_F_contig1041.317.1 ID=prot_E-siliculosus-1a_F_contig1041.317.1|Name=mRNA_E-siliculosus-1a_F_contig1041.317.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=428bp
MSRCGVLAGFVGLAGLIEQAQAFVGSPALRARAFSPSTSHKLSMVTEAKD
SYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGS
PWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFA
NLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPS
GERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWR
DVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDE
ASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSA
AMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDK
VKEELAKLVAAGAGAEAAAVGEAAAAR*
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mRNA from alignment at E-siliculosus-1a_F_contig1041:6874..14007-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1041.317.1 ID=mRNA_E-siliculosus-1a_F_contig1041.317.1|Name=mRNA_E-siliculosus-1a_F_contig1041.317.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7134bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1041:6874..14007- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTGTGCGACACCCAACGCTGTACCATGTCTCGCTGCGGAGTGCTGGCGGG TTTTGTGGGCCTGGCTGGCCTGATCGAGCAGGCCCAGGCCTTTGTGGGAT CTCCCGCCCTTAGAGCGAGAGCGTTCTCGCCGTCAACATCCCACAAGGTG TGTGTGCTGCTGTAGCAGCTGGGCCGGCCGCTGCGAGCAGCAGGCAGCAC TAGCAAGAATAGCAGCAGCAGCAGAAGCTCCAGGCTTGTGAGTCGTTCTT TTGTCGCTTTCCGCACTGTCGGTGTGCTAGCTCTGCAGCAGTGACAGACC TGCAGCAATGGCTCTGCAGGATACATGTATCATGACAAATTTGGCGCGAA GCGCTCTCTCAACCACATGAATCGACAACAGCAGCTTGTACACATACACA CGCAAACGTTGGGGTGTTTTACACTACAGGTTGCGTTGGGGGACCACACG CACCAGGTTGGTGGGTGTGCTCCCTGATATCATCCGTCGTTTACGTAGAT TCCCGGAAGCTCTAGACTTTGCTTTAGAGACGATATTCTAGAAGAATTTG CAATGTACTGCTGCTGCTGCTGTTGTATATAGTCGGTGTGTTGTACGCGA GGCTGCAGCTATTATTAGGAAAAATGATGTACTTTAATTTTAATACATAC AGAAAGACTACATGTACGCATTCGAGATAACCAACAGGGTTTTGTTACAG GGTTTTGTTATAGACACCAGCTACCGGCATCCAGTGACATGTTGACCTTC TCCCTGAGTTTCTTCGTCAACAACACCGTATCGAGACACGAGATGACCTC GCTGAGTTGCTTTGTCAACAATACCGTCCGTATCGAGACATGAAACTGCA TCTGGTGGCCTCTTTGGTGTTCGCCTCATGCTTGTTGCACTTTACGTAAG CGCCCACAGACATACACTTCTTCTGCGGTAGACACCCTGTTGATAAGGCT AGTCTATAAGTCGTGTAGACTCAGTCAGCGTCTAGGCTGCAGCAGTTGCC CGTAGTCTAGGCTACTCACACAGGACTGCTGAGTAGTCTAATGTATTGGC TAAACAGCCTTAATCTATTTAGCACACCCTGCAAGCCTTCAAGGCAGGGT AACTCGTTGCGCGTACCAATTTTAGTAATATTCAAGGTTTCCTCCGTTTT CGTTATGAATTGCCCGCTCGAGGCAGGCTGCGCTTGGAACAAACCGAGGC CAACGCGAGTAAAACAAAATGAAAATGAAAAGATGTTGCTCATTACCATG ATTCGTGCGGGGGAACGCCACCACCCGCTACTTCAACTTCAACTTGATGA ACGCCAACAGGCAACCGGCCCCTCCGCTCGGCTTGGCCGCTCTATATGAC CACCCTAAAATCTGCCACCACCCGGTACAATACTTTAACTTGATGAACGC CAACAGGCAACCGGCCCCTCCGCTCGGCCTTGGCCACTCCACATTACCAT CCTAAAATCTGGTCGCCTTGCGCTGTCTCTTATCTGTCTCAAAAACAACG GTCGAACGAACGGCGAAGCTGTCCATGGTGACGGAGGCGAAGGACAGCTA TGACGTCATGCTCCTGCCTGGGGACGGCATCGGTCCCGAGATCACGGCCG CCACCGTGAACGCTCTCGAGCCGCTGCAGTCGCTCTTCAAGCTCAACTTC AAGGAGGTGTGTCTTATCCGCGTGCACCCCAGAGAGGCAGGCCATGCGCT GATACTTTTTTTAAGAACAGATATGTGCTTCTGGTATCACAATCCCGGTG TGGCAGGACCATAGTCACTAGCAGAGAAGCGAACCGATAGATGTATATTT TATTTTATTTTAGTCTGGTTGCGTCTGAACCGCCAGACAGACGGCTGTGC TGCTCTGCTGCTGATTTGTTGCAGCTGCTGCGTGTTCAAACAACTGCAGT TGCCCTCTTCGATTCCTCAACTTCAAGCATGCACCTACGGTTCACGCAAG GGCGGTGGTCTCTTGGCTTGCGAAAATACACCGTCAACGGCAGCGGCATA TTCCCCGCTGCTGCGGTGCGCCTATTTTTCAGTTCGCCGTACACTATGCA TAGATCACCTTTCGTGAGTCCTCCCGCGCTTTTCTCTGGCCTCTTGTTCA AGGTGAACACCACCCCCCCCCTCCCCGTTCTGCGGGATAAAAGTGTCGCG GGTTGTTCTCAAAACTGGCTGTCAGCGTGTCCTAGTAGGCGTTTTCGTAC TGTTGTTGTAGACTTCCGTCGTAGACGGTACTAAATAGCGATCGAACGAC GGCCACGAACGTGCCCCCCCCCCCCCGCCCCCAGTATTCTGACTGCGTTC ACCCGATGTTTGCGATACTTTTTCTGGCCGTGCACACGTTATCCGCTGCG GTACACATCGCCGAAAGGCGCTGATCGGAGGTGCCGCCATCGATGCCGAG GGATCGCCGTGGCCTGATTCCACCATGGCGTTGGCCAAGGTGAGAGATGC GTTCTGTCCCTGTTGGTGCGCTACATGATGGTTTGTCTAGAAGGGGTGTC GGTGACCGGTGGTGGCCGTGTTGTTTGTTGCTGCTGGCCCTCGTGTTGGT GCTGGTATGGGGACGCAGTAGACGTTGTGGCGGTGGGTCCGCACAAAACT CACCGCGCTATCCGCAAGTTTCCGTGTAGACCGTGCCGCAATGTTTTGGG GGTGCGAACGATCGCATGTTGTTGTCAGTTATTTTTTGTCATCATTTTGT TTGTGTTTTTTTGTTGTGCGCAACCAATCCAAACGAAACTCATCAACAGG CGTCGGACTCTATCCTCCTGGCCGCCATCGGAGGGCCTAAGTGGGACGGC AACCCTCGGGAGCTGAGGCCCGAGACCGGGCTGCTGGCGATGCGCTCGCA GCTGGGGTTGTTTGCCAACCTTCGGCCTGCCAAGGTGAGAGGGGAAGCCG AACTATTATTTTTTTTTCTACTTCGAGCTCATTCGGTCCCTCGTCTGTTT CTTGCCATTTCCACATGTTCAGGTCTGTGACTTCGTATTTTGGCAACATA CGGAGTGCCGCAGTCCACCAAAACCACAAGTGTATATCTGGTCGTTGCAA TTTTTCTTAGTAGGGGCCTTAATCGCACAGGCCACGATACATATCACAAT AATGACGAATTTGGTTGCAGAATGAATGCAACAAGCTCTTGACTTCCCTT CTTTTGTTTGCTCCGTCCCTCCTCTTGCCTCTGCATCAACTACATAACCC ACATCCCCCCGCCTCTTGCCATATATTCTCCCGTAGGCCCTCCCCCCCCA ACGCTCCTCCTGGAAAATGGGTTGGTGTTTTCGAGATGACAATATAGCAA ACGAGCACGTCTCCCTTGTACACTCCCCATCCCCCACCACGCTACCTTAG GAGGAAGACCGGTGCGCCGGGTCACAAGGAATGCGTTGTCGAATGACCAT CCCCCTAGTTTATTTTGTCTTTTGGGTCTAGCACGCGCGGTCTGTGGTCT AGCAACTAAGGCGCGCAAAACATGAGTACCCTCCCGTCCCCCCGTCCCCA ACCGTTTTTTTTTTTTCTCTTTTGCGTACCCTGCACCCCGCCCCGCCTTC CCAAGGTGATGAAAGAGCTGGTGGACGCCTCTTCCCTCAAGCCCGAGATC GTGGAGGGGGTGGACATCATGGTGGTCAGGGAGCTCACGGGTGACGTATA CTTCGGCACGCCCAAGGTCCGCACCTGCTATTAATAGCTGTACACACTAT GCTGGGTGTGTAGTATATTGCAGCTGCCGATTGCTCTCGTTGCCGCCGTT TGCTGTTGAGTTTTGTCGGCATGATTGATTCAATTGTTATTGTCGTGGTC ACGGGGGCTCTACGGCGGCGACATGTACGTACGGAAAAACCATACATGCA GGCATTTTTGCACCAATCCTCCGAAAACCCAAAAGTGCAAATCAACAAAT GTGTGTTGCCCTCGATGCGATGATGATGTTTTGTCCTTCGATCAGCGCCC CTGTCGTTATTTCGTTCAATACGACTTGTTCCCGGAACTTTGCCGACCGC CCGACCTGGTTGAAACCCGGGCGGGTTTAAGGTAGACTAGCGGTCCCTTT ATGCGGCGTTGGCATAAGACAAGGCCGGTCGCTCTGTGTGACGCCGGTGA CAGATCGCGTGACACCGATGGAGTTGGAGCTGTCTCTTGTTCTGAATAGT GCCGGCTGCCCGGTACAAAAAGCCGAACAGATCCCTTGGTGCTGCCGTGC GGCCTTATAAGAGGGGACGGACCACTGCTGTCGTCACGAAGAACGACAGT GTGTGGGCTCTTCTTTCGACGGAGGGGATGGCGGCATCGCTGCCTAGATG ATTTACTAGCGTTGCCCGGAAAAAAAAGAACGCTGAAACGCCTCCGGGTT TGACGTCGACCCAACGGATGAGTGTGCAGTATGACCAACACGCGAACCGG CCAGCACAGAACCATGATGCCTCCTCGTATTTACTTTCCCCCCGAAATTC CTCCCCCTTGTCATGTGCGTACAGGGCATCGACGAGCTGCCTTCGGGGGA GCGTGTGGGGTACAACAACATGATCTACCACGAGCACGAGGTGCGCATGC GTCCCTTGGGGGTGTGGAGGGGCATCTCAGCGTTTTGTTTTGTTTTGGTC ACACGCAGTGGCGAGCGCTGTTGGTGCCAACGGGCGGTTGTGGTGGTGGC GGGGGGAAGCGGGCCGCCTTGACTCCGTTGTTTATTTTATTGATAAGTTC GCTCTTTCCATGCCTGTTCCATGTTGCAAAGTACCAGAAGCTCGGGGGAA GAGGACTAACTCCGGTTGTCTTATTATTGATGAGTTCGTCCACTGCATGC TTGTTTCATATATTGCGATGTACGAGAACCCCGACACAACAGCTGTGCTC TGTTTAAGTGGCGACTGTTTTTTGTTTATATTTGGCCGGCTTGTTTGACT TGGTTGGGAATATTGTGAACTGCAAGGACCTACTGTAGCTGTGCTCCTTT TGACGTGGCGTTATTTTTTTTTTCTCTTTTCTTGGTTGACACGAAAGGTG GAGCGTATCGCGAAGGTTGCGTACGACGTGGCGATGAAGAGGGGGAAGCG CCTGTGTTCCGTTGACAAGGCTAACGTGCTCGACGTCAGCCAGGTACGAC GTGCGTGTTCAGACACGCAGGAAAGGAAGGACTGTCGTAAAGCCTGCTGC TGCTGCTGCTTCTGCACCTACTACGACCGTTGTAGATGTTTTTTTGCTTT GGAAACACGTTGCAAGGCACTTAAAAAAAAAACTGGTCAATGCATGTTAC ATCAGCCCGACACGAAGTTTAAAACCTATCCATCGTGTTGTTGGGGGGGG GAAGGAAGACAGCAATGTGAAACTATGCCCATGTGGAAAAAGAAGACGAG ATCAACATTTCCTTGGGGATGTGAACTTTTCGAAGAACGTTATGGAGAAG CAGACACCCAAACGCTGCTTCTACTGCTGCTGCTGCTGCTGCTGCTGCTG CTGTCGCTGCTTTGGGTCGTGCTGCTGTAGCTGTGGAGGGACGTGGTGAT CAAGATGTCGGAGGACTACCCGGAGGTGGAGCTGACGCACCAGTACGTCG ACAACGCCGCGATGCAGCTCATCCGCTGGCCCAAGCAGTTCGACGTGATG GTGACCGGCAACATCTTCGGCGACATCCTCTCCGACGAGGCCTCCATGCT TGTGAGACAAGCCTTCCGTACATGTAGTGGTGTTGTCGCGTTTCTGCGTG TTTTGCCGTCCGTCGTTCTTGTTGCTGGTCACGATGATGATCTTGTGCGG GCAAGTGTTGGTGTGTGTAGTCTAAATCGTGCTAATGTTGTTCGTTGTTC TCACGATAATATTGGCCGTGTGTTATGACGTCGCGAAATCCCACAAATCA CGGGTGATTGATCGGGCTGACGAGTTCCCCCGCGCTTTCATGAAACCGCA CTGGCTGTATCGGATAGGTGGGCTCCCTTGGCATGCTCCCCTCCGCCTCC ATGGGAAACCCCGACGGCCCCGGTGTGTTCGAGCCGTGCCACGGTTCCGC CCCGGACATCGCGGGACAGGACAAGGCCAACCCATTGGTGAGAAGCCCCG TACGCAGGCACCGCCAAGACAGACGGGGAATTGTACCACCGGACTACCCA CCCCACCCTACAGTCACGTGGCCCCTCCTTACCCCGCAAACCGCAGCTCC TGGCTGTTGGTCCCTACGCGTGCCTCCTTGCCCCCCCCCCCCCCTCTCTG TGTACCTATGCATACAGTCGACGAATTGCGTACAAAACAACACGGAGTAC ACACGACTGTCCCGTCTGGCACGACACACCTCCAGTTGCCCCTCCCGTGC ACAGCATCCCCCCTACGACGTAACATGCACCTGAATCTGCTTTGTCCCCC TCCATCATGATTGTGCGTCCCTTTTCCTTCAAAGCACGATGCGTACATAT CTGGTCCCCCATCTTCCTCAACCACGCAACATAAACGTACGCCCAACAGG CAATGATCCTCTCTGCCGCGATGATGCTTCGGTACGACCTGGGGCGGCCG GCGGAGGCGGACATGGTGGAGGCGGCCGTGGACGTGGTCATGGACAAGGG CTACGCCACCGACGACATCCAGCGGGAGGGCACCACGGCCGTCGGCTGCA AGGAGATGGGCGACAAGGTGAAGGAAGAGCTCGCCAAGCTCGTGGCTGCG GGGGCCGGGGCGGAAGCGGCTGCCGTGGGCGAAGCGGCTGCGGCGCGATG AGCGGGTAGAAAATCGAGTTGAGTGCAGTCTGTCTGTCTGTCTGTCGTTT CTGGTATTGCCTGAATGGGTGCGCAAGGCAGGGAAACGGTAGACGAAATG GAGGGTGCCGACCTGCCGTGAGAGCGGAGAGGTGCAAGGATAATGCCGTT GTGTTCATGTGAGCGTTGCAAAATAGGACCGCCGTGTGGTTTGTGTCAGC ACGGACGACAATGGCGGATGGTACGGTATGGCGCACGAGACGCCACCAGG CGCCGGCGATCAGGAAACGCCCTGCCAAGCGCGTGACGGCTTCAACTCGA TGCGTCAAAAGCAGTTTCTCAAACATTTAGTGCTTCAACGTCGGTAAACG CTGGCACTAATAGGTGGGGCAGTTTTTTCTGTGAATAGGAAGGTCCGAAT GGGATAATCGCGGTCGGGGTGGCATCGCACAGGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1041:6874..14007-

>mRNA_E-siliculosus-1a_F_contig1041.317.1 ID=mRNA_E-siliculosus-1a_F_contig1041.317.1|Name=mRNA_E-siliculosus-1a_F_contig1041.317.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2568bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1041:6874..14007- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCTCGCTGCGGAGTGCTGGCGGGTTTTGTGGGCCTGGCTGGCCTGAT
CGAGCAGGCCCAGGCCTTTGTGGGATCTCCCGCCCTTAGAGCGAGAGCGT
TCTCGCCGTCAACATCCCACAAGATGTCTCGCTGCGGAGTGCTGGCGGGT
TTTGTGGGCCTGGCTGGCCTGATCGAGCAGGCCCAGGCCTTTGTGGGATC
TCCCGCCCTTAGAGCGAGAGCGTTCTCGCCGTCAACATCCCACAAGCTGT
CCATGGTGACGGAGGCGAAGGACAGCTATGACGTCATGCTCCTGCCTGGG
GACGGCATCGGTCCCGAGATCACGGCCGCCACCGTGAACGCTCTCGAGCC
GCTGCAGTCGCTCTTCAAGCTCAACTTCAAGGAGCTGTCCATGGTGACGG
AGGCGAAGGACAGCTATGACGTCATGCTCCTGCCTGGGGACGGCATCGGT
CCCGAGATCACGGCCGCCACCGTGAACGCTCTCGAGCCGCTGCAGTCGCT
CTTCAAGCTCAACTTCAAGGAGGCGCTGATCGGAGGTGCCGCCATCGATG
CCGAGGGATCGCCGTGGCCTGATTCCACCATGGCGTTGGCCAAGGCGCTG
ATCGGAGGTGCCGCCATCGATGCCGAGGGATCGCCGTGGCCTGATTCCAC
CATGGCGTTGGCCAAGGCGTCGGACTCTATCCTCCTGGCCGCCATCGGAG
GGCCTAAGTGGGACGGCAACCCTCGGGAGCTGAGGCCCGAGACCGGGCTG
CTGGCGATGCGCTCGCAGCTGGGGTTGTTTGCCAACCTTCGGCCTGCCAA
GGCGTCGGACTCTATCCTCCTGGCCGCCATCGGAGGGCCTAAGTGGGACG
GCAACCCTCGGGAGCTGAGGCCCGAGACCGGGCTGCTGGCGATGCGCTCG
CAGCTGGGGTTGTTTGCCAACCTTCGGCCTGCCAAGGTGATGAAAGAGCT
GGTGGACGCCTCTTCCCTCAAGCCCGAGATCGTGGAGGGGGTGGACATCA
TGGTGGTCAGGGAGCTCACGGGTGACGTATACTTCGGCACGCCCAAGGTG
ATGAAAGAGCTGGTGGACGCCTCTTCCCTCAAGCCCGAGATCGTGGAGGG
GGTGGACATCATGGTGGTCAGGGAGCTCACGGGTGACGTATACTTCGGCA
CGCCCAAGGGCATCGACGAGCTGCCTTCGGGGGAGCGTGTGGGGTACAAC
AACATGATCTACCACGAGCACGAGGGCATCGACGAGCTGCCTTCGGGGGA
GCGTGTGGGGTACAACAACATGATCTACCACGAGCACGAGGTGGAGCGTA
TCGCGAAGGTTGCGTACGACGTGGCGATGAAGAGGGGGAAGCGCCTGTGT
TCCGTTGACAAGGCTAACGTGCTCGACGTCAGCCAGGTGGAGCGTATCGC
GAAGGTTGCGTACGACGTGGCGATGAAGAGGGGGAAGCGCCTGTGTTCCG
TTGACAAGGCTAACGTGCTCGACGTCAGCCAGCTGTGGAGGGACGTGGTG
ATCAAGATGTCGGAGGACTACCCGGAGGTGGAGCTGACGCACCAGTACGT
CGACAACGCCGCGATGCAGCTCATCCGCTGGCCCAAGCAGTTCGACGTGA
TGGTGACCGGCAACATCTTCGGCGACATCCTCTCCGACGAGGCCTCCATG
CTTCTGTGGAGGGACGTGGTGATCAAGATGTCGGAGGACTACCCGGAGGT
GGAGCTGACGCACCAGTACGTCGACAACGCCGCGATGCAGCTCATCCGCT
GGCCCAAGCAGTTCGACGTGATGGTGACCGGCAACATCTTCGGCGACATC
CTCTCCGACGAGGCCTCCATGCTTGTGGGCTCCCTTGGCATGCTCCCCTC
CGCCTCCATGGGAAACCCCGACGGCCCCGGTGTGTTCGAGCCGTGCCACG
GTTCCGCCCCGGACATCGCGGGACAGGACAAGGCCAACCCATTGGTGGGC
TCCCTTGGCATGCTCCCCTCCGCCTCCATGGGAAACCCCGACGGCCCCGG
TGTGTTCGAGCCGTGCCACGGTTCCGCCCCGGACATCGCGGGACAGGACA
AGGCCAACCCATTGGCAATGATCCTCTCTGCCGCGATGATGCTTCGGTAC
GACCTGGGGCGGCCGGCGGAGGCGGACATGGTGGAGGCGGCCGTGGACGT
GGTCATGGACAAGGGCTACGCCACCGACGACATCCAGCGGGAGGGCACCA
CGGCCGTCGGCTGCAAGGAGATGGGCGACAAGGTGAAGGAAGAGCTCGCC
AAGCTCGTGGCTGCGGGGGCCGGGGCGGAAGCGGCTGCCGTGGGCGAAGC
GGCTGCGGCGCGATGAGCAATGATCCTCTCTGCCGCGATGATGCTTCGGT
ACGACCTGGGGCGGCCGGCGGAGGCGGACATGGTGGAGGCGGCCGTGGAC
GTGGTCATGGACAAGGGCTACGCCACCGACGACATCCAGCGGGAGGGCAC
CACGGCCGTCGGCTGCAAGGAGATGGGCGACAAGGTGAAGGAAGAGCTCG
CCAAGCTCGTGGCTGCGGGGGCCGGGGCGGAAGCGGCTGCCGTGGGCGAA
GCGGCTGCGGCGCGATGA
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