Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match:
D7G282_ECTSI (3-isopropylmalate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G282_ECTSI)
HSP 1 Score: 821 bits (2120), Expect = 2.710e-297
Identity = 423/427 (99.06%), Postives = 425/427 (99.53%), Query Frame = 1
Query: 25 MSRCGVLAGFVGLAGLIEQAQAFVGSPALRARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEELAKLVAAGAGAEAAAVGEAAAAR 1305
MSRCGVLAG VGLAGLIEQAQAFVGSP LRARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDST+ALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYAT+DIQREGTTAVGCKEMGDKVKEELAKLVAAGAGAEAAAVGEAAAAR
Sbjct: 1 MSRCGVLAGVVGLAGLIEQAQAFVGSPVLRARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDSTLALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATNDIQREGTTAVGCKEMGDKVKEELAKLVAAGAGAEAAAVGEAAAAR 427
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match:
A0A835ZK29_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK29_9STRA)
HSP 1 Score: 598 bits (1543), Expect = 6.840e-210
Identity = 300/379 (79.16%), Postives = 332/379 (87.60%), Query Frame = 1
Query: 118 RAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSED-YPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEELAKLV 1251
RA + S L M KDSY + LLPGDGIGPEIT ATV A++P LFK+ FKEALIGGAAIDA GSP+PD+T KASDS+LL+AIGGPKWDGNPRE RPETGLLAMR LGLFANLRPAKV+++L+DAS+LKPEIV+GVDIMVVRELTGDVYFGTPKGI+ SGER GYNNMIY+EHEVERIA+VA+DVA KRGKR+CSVDKANVLDVSQLWRDVVI++ +D YP+VELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+GNP GPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRP EAD++E AVD V+D+GYAT DI R+G VGCKEMG +V E L KL+
Sbjct: 28 RAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL 406
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match:
A0A6V1T6U9_HETAK (3-isopropylmalate dehydrogenase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T6U9_HETAK)
HSP 1 Score: 525 bits (1352), Expect = 5.980e-181
Identity = 277/397 (69.77%), Postives = 320/397 (80.60%), Query Frame = 1
Query: 70 LIEQAQAFVGSPALRARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSL-FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEELAKLVAA 1257
+++ A AFVG+P + AR S + M E KDSYD+ LL GDGIGPEIT ATV AL PL+ L FK+NFKEALIGGAA+DA P+PD ++ K SDS+LL+ IGG KWD NPRELRPETGLL MR ++GLFANLRPAKV+ +L+ AS+LK E++EGVDIMVVRELTGDVYFGTPKG E G+RV YNNMIY E E+ RIAKVA+DVAMKRGK + S+DKANVLDVSQLWRDVVI+ S++YPEVEL H Y+DNAAMQLIRWPKQFD +V GN+FGDI+SDEASMLVGSLGMLPSAS+G+P GPGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL R EA M+E AV+ V+D T DI G VGCK+MG EE+AKLVAA
Sbjct: 11 ILQIANAFVGTPLMGARG-----SARTFMAVEKKDSYDITLLTGDGIGPEITQATVAALAPLEKLGFKMNFKEALIGGAALDAVNHPFPDESLEQCKGSDSVLLSCIGGYKWDKNPRELRPETGLLRMRKEMGLFANLRPAKVIPQLMGASTLKEEVLEGVDIMVVRELTGDVYFGTPKGT-ETRDGKRVAYNNMIYDEEEIRRIAKVAFDVAMKRGKNVYSIDKANVLDVSQLWRDVVIEESKNYPEVELNHMYIDNAAMQLIRWPKQFDTIVCGNLFGDIISDEASMLVGSLGMLPSASIGDPSGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSRAEEAQMLEDAVEQVLDI-CRTVDIAGGGLPTVGCKQMG----EEVAKLVAA 396
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match:
A0A7S0Z0Z5_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z0Z5_9CRYP)
HSP 1 Score: 515 bits (1327), Expect = 1.500e-177
Identity = 264/378 (69.84%), Postives = 306/378 (80.95%), Query Frame = 1
Query: 112 RARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSL--FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEEL 1239
R RA S S +SM + KD Y + LPGDGIGPEI A + A + + F++ +KEALIGGAA+DA P PD+T+ +ASDS LLAAIGGPKWD NPRELRPETGLL MR +LGLFANLRPA V+ +LVDAS+LKPE+++GVDIMVVRELTGDVYFG PKGI+E GER G+NNM Y E E+ RIAKVA+D+AMKRGK++CSVDKANVLDVSQLWRDVVI+ + YPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+G+P GPGV+EPCHGSAPDIAG DKANPLA ILSAAMM RYDL RP AD +EAAV+ +D G T D+ E T +GCK+MG++V + +
Sbjct: 9 RVRAHSTS----VSMAVKKKDKYTITTLPGDGIGPEIIAGAITACDAVAKKQGFEIEWKEALIGGAALDAHNDPCPDATLDQMRASDSCLLAAIGGPKWDKNPRELRPETGLLKMRKELGLFANLRPATVLDQLVDASTLKPEVIKGVDIMVVRELTGDVYFGAPKGIEER-DGERFGFNNMCYKESEIRRIAKVAFDLAMKRGKKVCSVDKANVLDVSQLWRDVVIEEAAAYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGDPSGPGVYEPCHGSAPDIAGTDKANPLATILSAAMMFRYDLDRPEAADALEAAVNKALDDGLRTADLATENT--IGCKQMGEEVAKRV 379
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match:
A0A7S1G2F4_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G2F4_9STRA)
HSP 1 Score: 510 bits (1313), Expect = 5.790e-175
Identity = 269/365 (73.70%), Postives = 301/365 (82.47%), Query Frame = 1
Query: 172 DSYDVMLLPGDGIGPEITAATVNALEPLQSL--FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELP-SGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIK-MSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQ--REGTTAVGCKEMGDKVKEELAKL 1248
+SY V +L GDGIGPEI+ AT L L F+L K ALIGG AIDA SP+PD ++A ++SDS+LLA IGGPKWDGNPRELRPE+GLL MR ++GLFANLRPAKVM +LVDAS+LK EIVEGVD+MVVRELTGDVYFG PKGID P +GERVGYNNMIY E EV RIAKVA DVAMKRGK+LCSVDKANVLDVSQLWRDV I M +DYPEV+L+H YVDNAAMQLIRWPKQFD +VTGNIFGDILSDEASMLVGSLGMLPSAS+G +GPGVFEP HGSAPDIAGQD ANPLAMILSAAMMLRYDL RP EAD++E AV+ V+DKG T DI+ +G VGC EMGD V E +A +
Sbjct: 46 ESYSVTILEGDGIGPEISTATKKVLAALTKRCGFELELKPALIGGCAIDAANSPFPDESLAQCRSSDSVLLACIGGPKWDGNPRELRPESGLLKMRKEMGLFANLRPAKVMSQLVDASTLKREIVEGVDVMVVRELTGDVYFGAPKGIDTDPVTGERVGYNNMIYSESEVRRIAKVAGDVAMKRGKKLCSVDKANVLDVSQLWRDVTIDVMEKDYPEVDLSHMYVDNAAMQLIRWPKQFDTIVTGNIFGDILSDEASMLVGSLGMLPSASIGL-EGPGVFEPIHGSAPDIAGQDVANPLAMILSAAMMLRYDLARPEEADILERAVEAVLDKGIRTADIKFDGDGCRLVGCVEMGDTVAEIVATV 409
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match:
A0A7S2RSG3_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSG3_9STRA)
HSP 1 Score: 509 bits (1312), Expect = 1.250e-174
Identity = 259/367 (70.57%), Postives = 296/367 (80.65%), Query Frame = 1
Query: 169 KDSYDVMLLPGDGIGPEITAATVNALEPLQSL---FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGT--TAVGCKEMGDKVKEELAKLVA 1254
K+ + LLPGDGIGPEIT ATV LE L +F EALIGGAA+DA P+P+ T+ ++SDS+LLA IGGPKWDGNPR+ RPETGLLAMR +GLFANLRPAKV+ +LVDAS+LK EIVEGVDIMVVRELTGDVYFG PKGID L GERVGYNNMIY E E++RIA+VAYDV++KR K+LCS+DKANVLDVSQLWRD V + ++P+VEL+H YVDNAAMQLIRWPKQFD +V GNIFGDILSDEASMLVGSLGMLPSAS+G P PGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL RP EAD++E AV+ V+D T DI +EG T VGC MGD V + +L A
Sbjct: 55 KEVSKITLLPGDGIGPEITVATVKVLETLAECKGDLSFDFNEALIGGAALDAVDDPFPEETLNSCQSSDSVLLACIGGPKWDGNPRDKRPETGLLAMRKNMGLFANLRPAKVLPQLVDASTLKREIVEGVDIMVVRELTGDVYFGEPKGIDTLEDGERVGYNNMIYKESEIDRIARVAYDVSLKRRKQLCSIDKANVLDVSQLWRDKVTSIGAEFPDVELSHMYVDNAAMQLIRWPKQFDTIVCGNIFGDILSDEASMLVGSLGMLPSASLGEPSSPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLARPDEADILEKAVEKVLDSDVRTADIYQEGEGQTMVGCSAMGDAVCSAVKELFA 421
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match:
A0A7S0N7T0_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N7T0_9CRYP)
HSP 1 Score: 503 bits (1295), Expect = 1.100e-172
Identity = 264/378 (69.84%), Postives = 301/378 (79.63%), Query Frame = 1
Query: 112 RARAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSL--FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEEL 1239
R + FS TS + M KDSYDV LLPGDGIGPEI A V A + + + F +NFKEALIGGAA+DA P PD T+ KASDS+LLAAIGGPKWD NPRELRPETGLL MR LGLFANLRPA V+ +L+DAS+LKPE+V GVDIMVVRELTGDVYFG PKGI GER G+NNM Y E EV RIAKVA+D+A KRG ++CSVDKANVLDVSQLWRDVVI+ YP+VEL+H YVDNAAMQLIR PKQFDV+VTGNIFGDILSDEASMLVGSLGMLPSAS+G+ GPGVFEPCHGSAPDIAGQDKANPLA ILSAAMM RYDL RP A+ +E AV+ V+D G T D+ RE T +GC++MG++V + +
Sbjct: 8 RGQRFSGLTSSR--MAVSRKDSYDVTLLPGDGIGPEIIKAAVVACKAVAAKQGFTINFKEALIGGAALDAHNDPLPDVTLKQMKASDSVLLAAIGGPKWDKNPRELRPETGLLRMRKALGLFANLRPATVLPQLIDASTLKPEVVAGVDIMVVRELTGDVYFGEPKGIT-TKDGERFGFNNMCYKESEVRRIAKVAFDIASKRGNKVCSVDKANVLDVSQLWRDVVIEEHAKYPKVELSHMYVDNAAMQLIRNPKQFDVIVTGNIFGDILSDEASMLVGSLGMLPSASVGDRSGPGVFEPCHGSAPDIAGQDKANPLATILSAAMMFRYDLDRPEAAEALERAVNKVLDDGLRTADLARENT--IGCRQMGEEVAKRV 380
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match:
A0A7S0F2Y7_9CRYP (3-isopropylmalate dehydrogenase n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0F2Y7_9CRYP)
HSP 1 Score: 503 bits (1294), Expect = 4.070e-172
Identity = 268/387 (69.25%), Postives = 300/387 (77.52%), Query Frame = 1
Query: 109 LRARAFSPSTSH------------KLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSL--FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKV 1227
L A AFSP +S LSM + KDSY V LPGDGIGPEI AATV + + + FK+ FKEALIGGAA+DA P+PD T+ K+SDS+LLAAIGGPKWD NPR+ RPETGLL MR LGLFANLRPA V+ +L DAS+LKPE+V GVDIMVVRELTGDVYFG PKGI GER GYNNM Y E EV RIAKVA+D+A KRGKR+CSVDKANVLDVSQLWRDVVI+ +DYP+VEL+H YVDNAAMQLIR PKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+G+P GPGVFEP HGSAPDIAG DKANPLA ILSAAMM RYDL RP A +E AV+ V+D G T D+ + VGCK+MGD+V
Sbjct: 22 LVAEAFSPLSSFGRVQRRQASYVSSLSMAVKKKDSYFVTTLPGDGIGPEIMAATVKVCQAVAAKQGFKMEFKEALIGGAALDACNDPFPDETLKQMKSSDSVLLAAIGGPKWDANPRDKRPETGLLKMRKSLGLFANLRPATVLPQLADASTLKPEVVSGVDIMVVRELTGDVYFGEPKGIT-TKDGERFGYNNMCYKESEVRRIAKVAFDIARKRGKRVCSVDKANVLDVSQLWRDVVIETHKDYPDVELSHMYVDNAAMQLIRNPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGDPSGPGVFEPIHGSAPDIAGTDKANPLATILSAAMMFRYDLDRPDAAQAIEDAVNKVLDDGVRTGDLGGK----VGCKQMGDEV 403
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match:
A0A7S2V595_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V595_9STRA)
HSP 1 Score: 502 bits (1293), Expect = 5.180e-172
Identity = 256/370 (69.19%), Postives = 302/370 (81.62%), Query Frame = 1
Query: 145 KLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSL-FKLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDKVKEELAKLV 1251
+++M K SYDV LL GDGIGPEIT A + A++PL+ + F +NFK+ALIGG AID P+PD ++ + SDS+LLA IGG KWD NPR LRPETGLL MR ++ LFANLRPAKV+ +L+ AS+LKPE++EGVDIMVVRELTGDVYFG PKG G+RVGYNNMIY E E+ RIAKVA+DVAMKRGK++ S+DKANVLDVSQLWRDVV + S++YPEV+L H VDNAAMQLIRWPKQFD +V GN+FGDILSDEASMLVGSLGMLPSAS+GNP+ PGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL RP AD++EAAV+ V+D Y T DI +G +GCK+MG EE+AKLV
Sbjct: 22 QITMAVGKKASYDVTLLKGDGIGPEITDAAIVAMKPLEQMGFTMNFKDALIGGIAIDEVNDPFPDESLKQCQESDSVLLACIGGYKWDKNPRHLRPETGLLKMRKEMDLFANLRPAKVLPQLLGASTLKPEVLEGVDIMVVRELTGDVYFGQPKGTMTDEDGQRVGYNNMIYSEGEITRIAKVAFDVAMKRGKKVHSIDKANVLDVSQLWRDVVTEESQNYPEVDLQHMLVDNAAMQLIRWPKQFDTVVCGNLFGDILSDEASMLVGSLGMLPSASIGNPENPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLARPEAADILEAAVEEVLDT-YRTGDIAADGFELIGCKKMG----EEVAKLV 386
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Match:
A0A7S2P3R3_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P3R3_9STRA)
HSP 1 Score: 500 bits (1287), Expect = 2.550e-171
Identity = 258/361 (71.47%), Postives = 299/361 (82.83%), Query Frame = 1
Query: 160 TEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLF--KLNFKEALIGGAAIDAEGSPWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSE-DYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTA--VGCKEMGDKV 1227
T KDSYD+ LLPGDGIGPEIT AT L+ L F KLN KEALIGGAAIDA+ P+PD ++ + DS+LLA IGG KWD NPRELRPETGLL MR ++GLFANLRPA V+ +L+DAS+LK E+VEGVD+MVVRELTGDVYFGTPKGID + GERVGYNNMIY E E++RIA+VA DVA KRG +LCSVDKANVLDVSQLWR+VV + E ++P+VEL+H YVDNAAMQLIRWPKQFD +V GNIFGDILSDEASMLVGSLGMLPSAS+G DGPGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL RP EA ++E AV+ +++G T DI++EG +GC EMG++V
Sbjct: 14 TSKKDSYDITLLPGDGIGPEITTATTKVLQTLTERFNFKLNLKEALIGGAAIDAKNDPFPDESLQQCLSGDSVLLACIGGYKWDNNPRELRPETGLLKMRKEMGLFANLRPAVVLDQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIDVV-DGERVGYNNMIYSESEIKRIARVAGDVASKRGGKLCSVDKANVLDVSQLWREVVTDICEKEFPDVELSHMYVDNAAMQLIRWPKQFDTIVCGNIFGDILSDEASMLVGSLGMLPSASIGE-DGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLDRPHEALVLEKAVEEALEQGLRTADIKQEGDGCKLIGCVEMGEQV 372
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1041.317.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 2.71e-297 / Id = 99.06 Expect = 6.84e-210 / Id = 79.16 Expect = 5.98e-181 / Id = 69.77 Expect = 1.50e-177 / Id = 69.84 Expect = 5.79e-175 / Id = 73.70 Expect = 1.25e-174 / Id = 70.57 Expect = 1.10e-172 / Id = 69.84 Expect = 4.07e-172 / Id = 69.25 Expect = 5.18e-172 / Id = 69.19 Expect = 2.55e-171 / Id = 71.47 Sequence D7G282_ECTSI A0A835ZK29_9STRA A0A6V1T6U9_HETAK A0A7S0Z0Z5_9CRYP A0A7S1G2F4_9STRA A0A7S2RSG3_9STRA A0A7S0N7T0_9CRYP A0A7S0F2Y7_9CRYP A0A7S2V595_9STRA A0A7S2P3R3_9STRA
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1
Stop 1
Cds size 1284
Model size 1741
Exons 10
Ec32 ortholog Ec-16_002120.1
Ec32 ortholog description 3-isopropylmalate dehydrogenase
Hectar predicted targeting category chloroplast
BRITE br01601,ko00000,ko00001,ko00002,ko01000,ko04121
Best eggNOG OG NA|NA|NA
Best tax level Eukaryota
COG Functional cat. CE
EC 1.1.1.85
EggNOG OGs COG0473@1,KOG0786@2759
EggNOG free text desc. 3-isopropylmalate dehydrogenase activity
GOs GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006790,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009651,GO:0009941,GO:0009987,GO:0016143,GO:0016144,GO:0019748,GO:0019757,GO:0019758,GO:0019760,GO:0019761,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044249,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0050896,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
KEGG Module M00432,M00535
KEGG Pathway ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230
KEGG Reaction R00994,R04426,R08621,R08625,R08629,R08636,R08642,R08646,R10052
KEGG ko ko:K00052,ko:K21360,ko:K22382
KEGG rclass RC00084,RC00114,RC00417,RC03036
Seed eggNOG ortholog 2880.D7G282
Seed ortholog evalue 2.9e-235
Seed ortholog score 820.8
Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1041.317.1
>prot_E-siliculosus-1a_F_contig1041.317.1 ID=prot_E-siliculosus-1a_F_contig1041.317.1|Name=mRNA_E-siliculosus-1a_F_contig1041.317.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=428bp
MSRCGVLAGFVGLAGLIEQAQAFVGSPALRARAFSPSTSHKLSMVTEAKD SYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGS PWPDSTMALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFA NLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPS GERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWR DVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDE ASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSA AMMLRYDLGRPAEADMVEAAVDVVMDKGYATDDIQREGTTAVGCKEMGDK VKEELAKLVAAGAGAEAAAVGEAAAAR* back to top mRNA from alignment at E-siliculosus-1a_F_contig1041:6874..14007-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1041.317.1 ID=mRNA_E-siliculosus-1a_F_contig1041.317.1|Name=mRNA_E-siliculosus-1a_F_contig1041.317.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7134bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1041:6874..14007- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)GTGTGCGACACCCAACGCTGTACC ATGTCTCGCTGCGGAGTGCTGGCGGG
TTTTGTGGGCCTGGCTGGCCTGATCGAGCAGGCCCAGGCCTTTGTGGGAT
CTCCCGCCCTTAGAGCGAGAGCGTTCTCGCCGTCAACATCCCACAAG GTG
TGTGTGCTGCTGTAGCAGCTGGGCCGGCCGCTGCGAGCAGCAGGCAGCAC
TAGCAAGAATAGCAGCAGCAGCAGAAGCTCCAGGCTTGTGAGTCGTTCTT
TTGTCGCTTTCCGCACTGTCGGTGTGCTAGCTCTGCAGCAGTGACAGACC
TGCAGCAATGGCTCTGCAGGATACATGTATCATGACAAATTTGGCGCGAA
GCGCTCTCTCAACCACATGAATCGACAACAGCAGCTTGTACACATACACA
CGCAAACGTTGGGGTGTTTTACACTACAGGTTGCGTTGGGGGACCACACG
CACCAGGTTGGTGGGTGTGCTCCCTGATATCATCCGTCGTTTACGTAGAT
TCCCGGAAGCTCTAGACTTTGCTTTAGAGACGATATTCTAGAAGAATTTG
CAATGTACTGCTGCTGCTGCTGTTGTATATAGTCGGTGTGTTGTACGCGA
GGCTGCAGCTATTATTAGGAAAAATGATGTACTTTAATTTTAATACATAC
AGAAAGACTACATGTACGCATTCGAGATAACCAACAGGGTTTTGTTACAG
GGTTTTGTTATAGACACCAGCTACCGGCATCCAGTGACATGTTGACCTTC
TCCCTGAGTTTCTTCGTCAACAACACCGTATCGAGACACGAGATGACCTC
GCTGAGTTGCTTTGTCAACAATACCGTCCGTATCGAGACATGAAACTGCA
TCTGGTGGCCTCTTTGGTGTTCGCCTCATGCTTGTTGCACTTTACGTAAG
CGCCCACAGACATACACTTCTTCTGCGGTAGACACCCTGTTGATAAGGCT
AGTCTATAAGTCGTGTAGACTCAGTCAGCGTCTAGGCTGCAGCAGTTGCC
CGTAGTCTAGGCTACTCACACAGGACTGCTGAGTAGTCTAATGTATTGGC
TAAACAGCCTTAATCTATTTAGCACACCCTGCAAGCCTTCAAGGCAGGGT
AACTCGTTGCGCGTACCAATTTTAGTAATATTCAAGGTTTCCTCCGTTTT
CGTTATGAATTGCCCGCTCGAGGCAGGCTGCGCTTGGAACAAACCGAGGC
CAACGCGAGTAAAACAAAATGAAAATGAAAAGATGTTGCTCATTACCATG
ATTCGTGCGGGGGAACGCCACCACCCGCTACTTCAACTTCAACTTGATGA
ACGCCAACAGGCAACCGGCCCCTCCGCTCGGCTTGGCCGCTCTATATGAC
CACCCTAAAATCTGCCACCACCCGGTACAATACTTTAACTTGATGAACGC
CAACAGGCAACCGGCCCCTCCGCTCGGCCTTGGCCACTCCACATTACCAT
CCTAAAATCTGGTCGCCTTGCGCTGTCTCTTATCTGTCTCAAAAACAACG
GTCGAACGAACGGCGAAGCTGTCCATGGTGACGGAGGCGAAGGACAGCTA
TGACGTCATGCTCCTGCCTGGGGACGGCATCGGTCCCGAGATCACGGCCG
CCACCGTGAACGCTCTCGAGCCGCTGCAGTCGCTCTTCAAGCTCAACTTC
AAGGAG GTGTGTCTTATCCGCGTGCACCCCAGAGAGGCAGGCCATGCGCT
GATACTTTTTTTAAGAACAGATATGTGCTTCTGGTATCACAATCCCGGTG
TGGCAGGACCATAGTCACTAGCAGAGAAGCGAACCGATAGATGTATATTT
TATTTTATTTTAGTCTGGTTGCGTCTGAACCGCCAGACAGACGGCTGTGC
TGCTCTGCTGCTGATTTGTTGCAGCTGCTGCGTGTTCAAACAACTGCAGT
TGCCCTCTTCGATTCCTCAACTTCAAGCATGCACCTACGGTTCACGCAAG
GGCGGTGGTCTCTTGGCTTGCGAAAATACACCGTCAACGGCAGCGGCATA
TTCCCCGCTGCTGCGGTGCGCCTATTTTTCAGTTCGCCGTACACTATGCA
TAGATCACCTTTCGTGAGTCCTCCCGCGCTTTTCTCTGGCCTCTTGTTCA
AGGTGAACACCACCCCCCCCCTCCCCGTTCTGCGGGATAAAAGTGTCGCG
GGTTGTTCTCAAAACTGGCTGTCAGCGTGTCCTAGTAGGCGTTTTCGTAC
TGTTGTTGTAGACTTCCGTCGTAGACGGTACTAAATAGCGATCGAACGAC
GGCCACGAACGTGCCCCCCCCCCCCCGCCCCCAGTATTCTGACTGCGTTC
ACCCGATGTTTGCGATACTTTTTCTGGCCGTGCACACGTTATCCGCTGCG
GTACACATCGCCGAAAGGCGCTGATCGGAGGTGCCGCCATCGATGCCGAG
GGATCGCCGTGGCCTGATTCCACCATGGCGTTGGCCAAG GTGAGAGATGC
GTTCTGTCCCTGTTGGTGCGCTACATGATGGTTTGTCTAGAAGGGGTGTC
GGTGACCGGTGGTGGCCGTGTTGTTTGTTGCTGCTGGCCCTCGTGTTGGT
GCTGGTATGGGGACGCAGTAGACGTTGTGGCGGTGGGTCCGCACAAAACT
CACCGCGCTATCCGCAAGTTTCCGTGTAGACCGTGCCGCAATGTTTTGGG
GGTGCGAACGATCGCATGTTGTTGTCAGTTATTTTTTGTCATCATTTTGT
TTGTGTTTTTTTGTTGTGCGCAACCAATCCAAACGAAACTCATCAACAGG
CGTCGGACTCTATCCTCCTGGCCGCCATCGGAGGGCCTAAGTGGGACGGC
AACCCTCGGGAGCTGAGGCCCGAGACCGGGCTGCTGGCGATGCGCTCGCA
GCTGGGGTTGTTTGCCAACCTTCGGCCTGCCAAG GTGAGAGGGGAAGCCG
AACTATTATTTTTTTTTCTACTTCGAGCTCATTCGGTCCCTCGTCTGTTT
CTTGCCATTTCCACATGTTCAGGTCTGTGACTTCGTATTTTGGCAACATA
CGGAGTGCCGCAGTCCACCAAAACCACAAGTGTATATCTGGTCGTTGCAA
TTTTTCTTAGTAGGGGCCTTAATCGCACAGGCCACGATACATATCACAAT
AATGACGAATTTGGTTGCAGAATGAATGCAACAAGCTCTTGACTTCCCTT
CTTTTGTTTGCTCCGTCCCTCCTCTTGCCTCTGCATCAACTACATAACCC
ACATCCCCCCGCCTCTTGCCATATATTCTCCCGTAGGCCCTCCCCCCCCA
ACGCTCCTCCTGGAAAATGGGTTGGTGTTTTCGAGATGACAATATAGCAA
ACGAGCACGTCTCCCTTGTACACTCCCCATCCCCCACCACGCTACCTTAG
GAGGAAGACCGGTGCGCCGGGTCACAAGGAATGCGTTGTCGAATGACCAT
CCCCCTAGTTTATTTTGTCTTTTGGGTCTAGCACGCGCGGTCTGTGGTCT
AGCAACTAAGGCGCGCAAAACATGAGTACCCTCCCGTCCCCCCGTCCCCA
ACCGTTTTTTTTTTTTCTCTTTTGCGTACCCTGCACCCCGCCCCGCCTTC
CCAAGGTGATGAAAGAGCTGGTGGACGCCTCTTCCCTCAAGCCCGAGATC
GTGGAGGGGGTGGACATCATGGTGGTCAGGGAGCTCACGGGTGACGTATA
CTTCGGCACGCCCAAG GTCCGCACCTGCTATTAATAGCTGTACACACTAT
GCTGGGTGTGTAGTATATTGCAGCTGCCGATTGCTCTCGTTGCCGCCGTT
TGCTGTTGAGTTTTGTCGGCATGATTGATTCAATTGTTATTGTCGTGGTC
ACGGGGGCTCTACGGCGGCGACATGTACGTACGGAAAAACCATACATGCA
GGCATTTTTGCACCAATCCTCCGAAAACCCAAAAGTGCAAATCAACAAAT
GTGTGTTGCCCTCGATGCGATGATGATGTTTTGTCCTTCGATCAGCGCCC
CTGTCGTTATTTCGTTCAATACGACTTGTTCCCGGAACTTTGCCGACCGC
CCGACCTGGTTGAAACCCGGGCGGGTTTAAGGTAGACTAGCGGTCCCTTT
ATGCGGCGTTGGCATAAGACAAGGCCGGTCGCTCTGTGTGACGCCGGTGA
CAGATCGCGTGACACCGATGGAGTTGGAGCTGTCTCTTGTTCTGAATAGT
GCCGGCTGCCCGGTACAAAAAGCCGAACAGATCCCTTGGTGCTGCCGTGC
GGCCTTATAAGAGGGGACGGACCACTGCTGTCGTCACGAAGAACGACAGT
GTGTGGGCTCTTCTTTCGACGGAGGGGATGGCGGCATCGCTGCCTAGATG
ATTTACTAGCGTTGCCCGGAAAAAAAAGAACGCTGAAACGCCTCCGGGTT
TGACGTCGACCCAACGGATGAGTGTGCAGTATGACCAACACGCGAACCGG
CCAGCACAGAACCATGATGCCTCCTCGTATTTACTTTCCCCCCGAAATTC
CTCCCCCTTGTCATGTGCGTACAGGGCATCGACGAGCTGCCTTCGGGGGA
GCGTGTGGGGTACAACAACATGATCTACCACGAGCACGAG GTGCGCATGC
GTCCCTTGGGGGTGTGGAGGGGCATCTCAGCGTTTTGTTTTGTTTTGGTC
ACACGCAGTGGCGAGCGCTGTTGGTGCCAACGGGCGGTTGTGGTGGTGGC
GGGGGGAAGCGGGCCGCCTTGACTCCGTTGTTTATTTTATTGATAAGTTC
GCTCTTTCCATGCCTGTTCCATGTTGCAAAGTACCAGAAGCTCGGGGGAA
GAGGACTAACTCCGGTTGTCTTATTATTGATGAGTTCGTCCACTGCATGC
TTGTTTCATATATTGCGATGTACGAGAACCCCGACACAACAGCTGTGCTC
TGTTTAAGTGGCGACTGTTTTTTGTTTATATTTGGCCGGCTTGTTTGACT
TGGTTGGGAATATTGTGAACTGCAAGGACCTACTGTAGCTGTGCTCCTTT
TGACGTGGCGTTATTTTTTTTTTCTCTTTTCTTGGTTGACACGAAAGGTG
GAGCGTATCGCGAAGGTTGCGTACGACGTGGCGATGAAGAGGGGGAAGCG
CCTGTGTTCCGTTGACAAGGCTAACGTGCTCGACGTCAGCCAG GTACGAC
GTGCGTGTTCAGACACGCAGGAAAGGAAGGACTGTCGTAAAGCCTGCTGC
TGCTGCTGCTTCTGCACCTACTACGACCGTTGTAGATGTTTTTTTGCTTT
GGAAACACGTTGCAAGGCACTTAAAAAAAAAACTGGTCAATGCATGTTAC
ATCAGCCCGACACGAAGTTTAAAACCTATCCATCGTGTTGTTGGGGGGGG
GAAGGAAGACAGCAATGTGAAACTATGCCCATGTGGAAAAAGAAGACGAG
ATCAACATTTCCTTGGGGATGTGAACTTTTCGAAGAACGTTATGGAGAAG
CAGACACCCAAACGCTGCTTCTACTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGTCGCTGCTTTGGGTCGTGCTGCTGTAGCTGTGGAGGGACGTGGTGAT
CAAGATGTCGGAGGACTACCCGGAGGTGGAGCTGACGCACCAGTACGTCG
ACAACGCCGCGATGCAGCTCATCCGCTGGCCCAAGCAGTTCGACGTGATG
GTGACCGGCAACATCTTCGGCGACATCCTCTCCGACGAGGCCTCCATGCT
T GTGAGACAAGCCTTCCGTACATGTAGTGGTGTTGTCGCGTTTCTGCGTG
TTTTGCCGTCCGTCGTTCTTGTTGCTGGTCACGATGATGATCTTGTGCGG
GCAAGTGTTGGTGTGTGTAGTCTAAATCGTGCTAATGTTGTTCGTTGTTC
TCACGATAATATTGGCCGTGTGTTATGACGTCGCGAAATCCCACAAATCA
CGGGTGATTGATCGGGCTGACGAGTTCCCCCGCGCTTTCATGAAACCGCA
CTGGCTGTATCGGATAGGTGGGCTCCCTTGGCATGCTCCCCTCCGCCTCC
ATGGGAAACCCCGACGGCCCCGGTGTGTTCGAGCCGTGCCACGGTTCCGC
CCCGGACATCGCGGGACAGGACAAGGCCAACCCATTG GTGAGAAGCCCCG
TACGCAGGCACCGCCAAGACAGACGGGGAATTGTACCACCGGACTACCCA
CCCCACCCTACAGTCACGTGGCCCCTCCTTACCCCGCAAACCGCAGCTCC
TGGCTGTTGGTCCCTACGCGTGCCTCCTTGCCCCCCCCCCCCCCTCTCTG
TGTACCTATGCATACAGTCGACGAATTGCGTACAAAACAACACGGAGTAC
ACACGACTGTCCCGTCTGGCACGACACACCTCCAGTTGCCCCTCCCGTGC
ACAGCATCCCCCCTACGACGTAACATGCACCTGAATCTGCTTTGTCCCCC
TCCATCATGATTGTGCGTCCCTTTTCCTTCAAAGCACGATGCGTACATAT
CTGGTCCCCCATCTTCCTCAACCACGCAACATAAACGTACGCCCAACAGG
CAATGATCCTCTCTGCCGCGATGATGCTTCGGTACGACCTGGGGCGGCCG
GCGGAGGCGGACATGGTGGAGGCGGCCGTGGACGTGGTCATGGACAAGGG
CTACGCCACCGACGACATCCAGCGGGAGGGCACCACGGCCGTCGGCTGCA
AGGAGATGGGCGACAAGGTGAAGGAAGAGCTCGCCAAGCTCGTGGCTGCG
GGGGCCGGGGCGGAAGCGGCTGCCGTGGGCGAAGCGGCTGCGGCGCGATG
A GCGGGTAGAAAATCGAGTTGAGTGCAGTCTGTCTGTCTGTCTGTCGTTT
CTGGTATTGCCTGAATGGGTGCGCAAGGCAGGGAAACGGTAGACGAAATG
GAGGGTGCCGACCTGCCGTGAGAGCGGAGAGGTGCAAGGATAATGCCGTT
GTGTTCATGTGAGCGTTGCAAAATAGGACCGCCGTGTGGTTTGTGTCAGC
ACGGACGACAATGGCGGATGGTACGGTATGGCGCACGAGACGCCACCAGG
CGCCGGCGATCAGGAAACGCCCTGCCAAGCGCGTGACGGCTTCAACTCGA
TGCGTCAAAAGCAGTTTCTCAAACATTTAGTGCTTCAACGTCGGTAAACG
CTGGCACTAATAGGTGGGGCAGTTTTTTCTGTGAATAGGAAGGTCCGAAT
GGGATAATCGCGGTCGGGGTGGCATCGCACAGGG back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1041:6874..14007-
>mRNA_E-siliculosus-1a_F_contig1041.317.1 ID=mRNA_E-siliculosus-1a_F_contig1041.317.1|Name=mRNA_E-siliculosus-1a_F_contig1041.317.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2568bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1041:6874..14007- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) ATGTCTCGCTGCGGAGTGCTGGCGGGTTTTGTGGGCCTGGCTGGCCTGAT CGAGCAGGCCCAGGCCTTTGTGGGATCTCCCGCCCTTAGAGCGAGAGCGT TCTCGCCGTCAACATCCCACAAGATGTCTCGCTGCGGAGTGCTGGCGGGT TTTGTGGGCCTGGCTGGCCTGATCGAGCAGGCCCAGGCCTTTGTGGGATC TCCCGCCCTTAGAGCGAGAGCGTTCTCGCCGTCAACATCCCACAAGCTGT CCATGGTGACGGAGGCGAAGGACAGCTATGACGTCATGCTCCTGCCTGGG GACGGCATCGGTCCCGAGATCACGGCCGCCACCGTGAACGCTCTCGAGCC GCTGCAGTCGCTCTTCAAGCTCAACTTCAAGGAGCTGTCCATGGTGACGG AGGCGAAGGACAGCTATGACGTCATGCTCCTGCCTGGGGACGGCATCGGT CCCGAGATCACGGCCGCCACCGTGAACGCTCTCGAGCCGCTGCAGTCGCT CTTCAAGCTCAACTTCAAGGAGGCGCTGATCGGAGGTGCCGCCATCGATG CCGAGGGATCGCCGTGGCCTGATTCCACCATGGCGTTGGCCAAGGCGCTG ATCGGAGGTGCCGCCATCGATGCCGAGGGATCGCCGTGGCCTGATTCCAC CATGGCGTTGGCCAAGGCGTCGGACTCTATCCTCCTGGCCGCCATCGGAG GGCCTAAGTGGGACGGCAACCCTCGGGAGCTGAGGCCCGAGACCGGGCTG CTGGCGATGCGCTCGCAGCTGGGGTTGTTTGCCAACCTTCGGCCTGCCAA GGCGTCGGACTCTATCCTCCTGGCCGCCATCGGAGGGCCTAAGTGGGACG GCAACCCTCGGGAGCTGAGGCCCGAGACCGGGCTGCTGGCGATGCGCTCG CAGCTGGGGTTGTTTGCCAACCTTCGGCCTGCCAAGGTGATGAAAGAGCT GGTGGACGCCTCTTCCCTCAAGCCCGAGATCGTGGAGGGGGTGGACATCA TGGTGGTCAGGGAGCTCACGGGTGACGTATACTTCGGCACGCCCAAGGTG ATGAAAGAGCTGGTGGACGCCTCTTCCCTCAAGCCCGAGATCGTGGAGGG GGTGGACATCATGGTGGTCAGGGAGCTCACGGGTGACGTATACTTCGGCA CGCCCAAGGGCATCGACGAGCTGCCTTCGGGGGAGCGTGTGGGGTACAAC AACATGATCTACCACGAGCACGAGGGCATCGACGAGCTGCCTTCGGGGGA GCGTGTGGGGTACAACAACATGATCTACCACGAGCACGAGGTGGAGCGTA TCGCGAAGGTTGCGTACGACGTGGCGATGAAGAGGGGGAAGCGCCTGTGT TCCGTTGACAAGGCTAACGTGCTCGACGTCAGCCAGGTGGAGCGTATCGC GAAGGTTGCGTACGACGTGGCGATGAAGAGGGGGAAGCGCCTGTGTTCCG TTGACAAGGCTAACGTGCTCGACGTCAGCCAGCTGTGGAGGGACGTGGTG ATCAAGATGTCGGAGGACTACCCGGAGGTGGAGCTGACGCACCAGTACGT CGACAACGCCGCGATGCAGCTCATCCGCTGGCCCAAGCAGTTCGACGTGA TGGTGACCGGCAACATCTTCGGCGACATCCTCTCCGACGAGGCCTCCATG CTTCTGTGGAGGGACGTGGTGATCAAGATGTCGGAGGACTACCCGGAGGT GGAGCTGACGCACCAGTACGTCGACAACGCCGCGATGCAGCTCATCCGCT GGCCCAAGCAGTTCGACGTGATGGTGACCGGCAACATCTTCGGCGACATC CTCTCCGACGAGGCCTCCATGCTTGTGGGCTCCCTTGGCATGCTCCCCTC CGCCTCCATGGGAAACCCCGACGGCCCCGGTGTGTTCGAGCCGTGCCACG GTTCCGCCCCGGACATCGCGGGACAGGACAAGGCCAACCCATTGGTGGGC TCCCTTGGCATGCTCCCCTCCGCCTCCATGGGAAACCCCGACGGCCCCGG TGTGTTCGAGCCGTGCCACGGTTCCGCCCCGGACATCGCGGGACAGGACA AGGCCAACCCATTGGCAATGATCCTCTCTGCCGCGATGATGCTTCGGTAC GACCTGGGGCGGCCGGCGGAGGCGGACATGGTGGAGGCGGCCGTGGACGT GGTCATGGACAAGGGCTACGCCACCGACGACATCCAGCGGGAGGGCACCA CGGCCGTCGGCTGCAAGGAGATGGGCGACAAGGTGAAGGAAGAGCTCGCC AAGCTCGTGGCTGCGGGGGCCGGGGCGGAAGCGGCTGCCGTGGGCGAAGC GGCTGCGGCGCGATGAGCAATGATCCTCTCTGCCGCGATGATGCTTCGGT ACGACCTGGGGCGGCCGGCGGAGGCGGACATGGTGGAGGCGGCCGTGGAC GTGGTCATGGACAAGGGCTACGCCACCGACGACATCCAGCGGGAGGGCAC CACGGCCGTCGGCTGCAAGGAGATGGGCGACAAGGTGAAGGAAGAGCTCG CCAAGCTCGTGGCTGCGGGGGCCGGGGCGGAAGCGGCTGCCGTGGGCGAA GCGGCTGCGGCGCGATGA back to top