Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1039.299.1 vs. uniprot
Match:
D7FT34_ECTSI (Ankyrin 2, neuronal isoform 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT34_ECTSI)
HSP 1 Score: 623 bits (1606), Expect = 5.350e-216
Identity = 474/614 (77.20%), Postives = 486/614 (79.15%), Query Frame = 1
Query: 1 MYPKREALRESCRELVAVVIDDATPKQWADWVRIPVEHAAAQGKFDLVAALLKAGGTGASGVRGRGGRTILDAAAKGGNGNVVSAILNAGAKPDLGIRSGKKKRAPLHRAALHGHEAATRVLMMAGANVNLLDGDKRGALALAIRGGHDNVVCSLLLGGASPNGKDKKGDSPLHVAAAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVNAGDSTGYTALHTAADNNQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXRYNSCCDVVRXXXXXXXXXXXXXXXXXXXXXXXXXTQADRVVDLLLRWGADEMKANHNGDKHVPVPLLHFVPRHTADVVGTTVADDEPVLSEGQRKERKERVTRLLANAHVDRTWRRRGWLVLCRSRYLLSKMPRDIVDCHQGEVGEDLLRSGSRSNAKKESSGGRNXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------HHSGATSPLFGQAPGDGDDNGRVAAVDATTSTRANGIGIGGGAPNSGGNDSDDSDDGTDRIEARLKSSGVCFALLALAEVEEGLFRKVAAYI 1791
MYPKREALRESCRELVAVVIDDATPKQWADWVRIPVEHAAAQGKFDLV ALLKAGGTGASGVRGRGGRTILDAAAKGGNGNVVSAILNAGAKPDLGIRSGKKKR PLH AALHGHEAATRVLMMAGANVNLLDG+KRG ASPNGKDKKGDSPLHVAAAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VD+NAGDSTGYTALHTAAD XXXXXXXXXXXXXXXXXXXXXXXXXXXR+NSCCDVVRXXXXXXXXXXXXXXXXXXXXXXXXXTQADRVVDLLLRWGADE KANHNGD VPVPLL F+PRHTADVVGT+VADDE VL EGQRKE+KE V RLLANAHVDRTWRRRGWLVLCRSRYLLSKMPRD+VDCHQG GEDLLRSGSRSNA K+SS GRN XXXXXXXXXXXXXXXXX HSGATSPLFGQA G GDDNGR AAV AT +TRANGIGIGG A NS GNDSDD DGTD IEA KSSG CFALLALAEV++GLFRKV AY+
Sbjct: 1 MYPKREALRESCRELVAVVIDDATPKQWADWVRIPVEHAAAQGKFDLVTALLKAGGTGASGVRGRGGRTILDAAAKGGNGNVVSAILNAGAKPDLGIRSGKKKRGPLHHAALHGHEAATRVLMMAGANVNLLDGEKRGXXXXXXXXXXXXXXXXXXXXXASPNGKDKKGDSPLHVAAAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMVGPLLMAGANPGIRFGEHELSPLDSAVSDGHMGVLRALVLHGVDINAGDSTGYTALHTAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFNSCCDVVRXXXXXXXXXXXXXXXXXXXXXXXXXTQADRVVDLLLRWGADEGKANHNGD--VPVPLLRFLPRHTADVVGTSVADDELVLPEGQRKEKKEHVIRLLANAHVDRTWRRRGWLVLCRSRYLLSKMPRDMVDCHQGGGGEDLLRSGSRSNANKKSSDGRNRATKMIRTMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGARSRHSGATSPLFGQATGGGDDNGRAAAVAATANTRANGIGIGG-AANSSGNDSDDGGDGTDWIEAHRKSSGACFALLALAEVDDGLFRKVVAYM 611
BLAST of mRNA_E-siliculosus-1a_F_contig1039.299.1 vs. uniprot
Match:
A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE)
HSP 1 Score: 157 bits (396), Expect = 1.100e-37
Identity = 149/493 (30.22%), Postives = 199/493 (40.37%), Query Frame = 1
Query: 1 MYPKREALRESCRELVAVVIDDATPKQWADWVRIPVEHAAAQGKFDLVAALLKAGGTGASGVRGRGGRTILDAAAKGGNGNVVSAILNAGAKPDLGIRSGKKKRAPLHRAALHGHEAATRVLMMAGANVNLLD-GDKRGALALAIRGGHDNVVCSLLLGGASPNGKDKKGDSPLHVAAAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVD---VNAGDSTGYTALHTAADNNQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXRYNSCCDVVRXXXXXXXXXXXXXXXXXXXXXXXXXTQA--DRVVDLLLRWGADEMKANHNGDKHVPVPLLHFVPRHTADV---------VGTTVADDEPVLSEGQRKERKERVTRLLANAHVDRTWRRRGWLVLCRSRYLLSKMPRDIVDCHQGEVGEDLLRSGSRSNAKKESSGGRN 1434
+YPKR L + E+ ++ ATP+QWA+W+R P+EHAAA+G LV LL AG G +G RG GRT+LDAAA GGN +VV+ +L +G D+ + S +R+ LH A++ GHEAA + L++AGA+VN +D GD +L +A+ G H ++V LL+GGA PN + G +PLH+AAA + V A D+ G TALH A NSC VV DR+VDLLLRWGA E N NG + + H D VG + + + E QR RV LLA A DRTWRRR WLV+ R+R E G SGS S+ + E++ GRN
Sbjct: 3 LYPKRALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHARGAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRA----RV--LLARAPADRTWRRRCWLVMLRAR---------------AERGRGAPSSGSGSD-RTEAATGRN 473
BLAST of mRNA_E-siliculosus-1a_F_contig1039.299.1 vs. uniprot
Match:
A0A6H5JK08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK08_9PHAE)
HSP 1 Score: 143 bits (361), Expect = 2.050e-33
Identity = 89/173 (51.45%), Postives = 102/173 (58.96%), Query Frame = 1
Query: 106 VEHAAAQGKFDLVAALLKAGGTGASGVRGRGGRTILDAAAKGGNGNVVSAILNAGAKPDLGIRSGKKKRAPLHRAALHGHEAATRVLMMAGANVNLLDGDKRGALALAIR-------------------------------GGHDNVVCSLLLGGASPNGKDKKGDSPLHVAA 531
VEHAAA G F+LV ALLKAGGTG+ G+RG GRT+LDA PD RS K+R+ LHRAALHGHEAA RVLMMAGANV LD KRG LALA+R G H+++VCSLLLGGA P+ KDKKGD+PLH+AA
Sbjct: 35 VEHAAANGNFELVTALLKAGGTGSPGLRGCRGRTLLDAXXXXXXXXXXXXXXXXXXTPDRCARSASKRRSALHRAALHGHEAAARVLMMAGANVGSLDAVKRGPLALAVRRNVVESLSIRCDLDCSNLSSSPRETCCAHERGEHEHLVCSLLLGGACPSAKDKKGDAPLHLAA 207
BLAST of mRNA_E-siliculosus-1a_F_contig1039.299.1 vs. uniprot
Match:
D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI)
HSP 1 Score: 142 bits (357), Expect = 4.730e-33
Identity = 83/179 (46.37%), Postives = 112/179 (62.57%), Query Frame = 1
Query: 1 MYPKREALRESCRELVAVVIDDATPKQWADWVRIPVEHAAAQGKFDLVAALLKAGGTGASGVRGRGGRTILDAAAKGGNGNVVSAILNAGAKPDLGIRSGKKKRAPLHRAALHGHEAATRVLMMAGANVNLLD-GDKRGALALAIRGGHDNVVCSLLLGGASPNGKDKKGDSPLHVAAA 534
+YPKR L + E+ ++ ATP+QWADW+R P+EHAAA+G LV LL+AG G +G RG GRT+LDAA +G PD+ + S KR+ LH A + GHEAA R LM+AGAN+ +D GD+ +A GGH ++V +LL+GGA PN + + G +PLHVAAA
Sbjct: 3 LYPKRALLEGAEVEIFKLLSFCATPEQWADWLRAPLEHAAARGNIGLVERLLEAGADGRAGWRGCRGRTMLDAAXXXXXXXXXXXXXXSGCAPDVNVVSVSSKRSALHLAVVCGHEAAARTLMIAGANIRRVDPGDQCVPFHVAAEGGHGDLVGNLLIGGACPNSRTRFGRTPLHVAAA 181
BLAST of mRNA_E-siliculosus-1a_F_contig1039.299.1 vs. uniprot
Match:
A0A6H5JY41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY41_9PHAE)
HSP 1 Score: 137 bits (345), Expect = 4.670e-31
Identity = 80/175 (45.71%), Postives = 111/175 (63.43%), Query Frame = 1
Query: 7 PKREALRESCRELVAVVIDDATPKQWADWVRIPVEHAAAQGKFDLVAALLKAGGTGASGVRGRGGRTILDAAAKGGNGNVVSAILNAGAKPDLGIRSGKKKRAPLHRAALHGHEAATRVLMMAGANVNLLDGDKRGA-LALAIRGGHDNVVCSLLLGGASPNGKDKKGDSPLHVA 528
PKR L E+ E+ ++ ATP++WA+W+R P EHAAA+G LV LL+AG G +G RG RT+LDAAA GGN +VV+ +L + PD+ + S KR+ LH A HEAA R LM+AGA+ + +D R +A GGHD++V + L GGA PN + + G +PLH+A
Sbjct: 5 PKRALLEEAELEIFKLLSFGATPERWAEWLRAPQEHAAARGNIGLVERLLEAGADGGAGWRGCRSRTMLDAAALGGNADVVTKLLRSECVPDVNVVSVSSKRSALHLAVTWSHEAAARTLMIAGADNHRVDPVNRYTPFHVAAEGGHDDLVDNYLTGGACPNSRSRVGRTPLHLA 179
BLAST of mRNA_E-siliculosus-1a_F_contig1039.299.1 vs. uniprot
Match:
D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI)
HSP 1 Score: 136 bits (342), Expect = 1.020e-30
Identity = 80/168 (47.62%), Postives = 112/168 (66.67%), Query Frame = 1
Query: 40 ELVAVVIDDATPKQWADWVRIPVEHAAAQGKFDLVAALLKAGGTGASGVRGRGGRTILDAAAKGGNGNVVSAILNAGAKPDLGIRSGKKKRAPLHRAALHGHEAATRVLMMAGANVNLLD-GDKRGALALAIRGGHDNVVCSLLLGGASPNGKDKKG---DSPLHVAA 531
E+ +V + ATP+QWA W+R P+EHAAA G +LV LLKAG G +G RG GR++LDAAA GGN V+SA+L AG PD+ + + R+ L+++ L HEAA R L++AGA+VN +D DK G L A++ G D++V +LL+ GA+PN + +PLH AA
Sbjct: 14 EIFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGANPNVIVRHSFGHGTPLHAAA 181
BLAST of mRNA_E-siliculosus-1a_F_contig1039.299.1 vs. uniprot
Match:
D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI)
HSP 1 Score: 126 bits (317), Expect = 2.340e-27
Identity = 142/440 (32.27%), Postives = 182/440 (41.36%), Query Frame = 1
Query: 1 MYPKREALRESCRELVAVVIDDATPKQWADWVRIPVEHAAAQGKFDLVAALLKAGGTGASGVRGRGGRTILDAAAKGGNGNVVSAILNAGAKPDLGIRSGKKKRAPLHRAALHGHEAATRVLMMAGANVNLLD-GDKRGALALAIRGGHDNVVCSLLLGGASPNGKDKKGDSPLHVAAAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVNAGDSTGYTALHTAADNNQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXRYNSCCDVVRXXXXXXXXXXXXXXXXXXXXXXXXXTQA-DRVVDLLLRWGADEMKANHNGDKHVPVPLLHFVPRHTADVVGTTVADDEPVLSEGQRKERKERVTRLLANAHVDRTWRRRGWLVLCRSR 1314
MYP+R L + + ++ ATP+QW +W+R P+EHAAA+G+F LV LL AG G +G G GRT+LDAAA GGN +VV+ +L AG PD+ + S +R+ LH +A+ GHEAA R L++AGA+ N +D PN +D G +PLH AAY XXXXXXXXXXXXXXXXXXXXX VNA GYTALH NQ + + V D +VDLLLRWG E+ + G+ P LL +VA+ S ++ ER LLANA DR WRRR WLV+ R+R
Sbjct: 1 MYPRRPVLEGAEVGIFTLLSYGATPEQWREWLRAPLEHAAARGEFVLVEKLLNAGADGGAGWSGCRGRTLLDAAALGGNPDVVTTLLRAGCLPDVNVVSVSSRRSALHLSAVCGHEAAARKLILAGADANRVDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXPNARDLLGRTPLH-RAAYMGQDMVVAVLTDMPSTDKDILDKSGLSPLTVASQRGHLSTVKTLLNAGADVSMRTGHRNSXXXXXXXXXXXXXXXXXXXXXXXVNA-SKHGYTALHAGCAMNQAGAMDVLLDAGADMDRKCYGASTPLCVAIEFGASVQAVHTLLRRGCQVSGPMDKTMLHLACMTMAPGFDAIVDLLLRWGVSELTLDKGGN--TPAALL-------------SVAEG----SSSRKAREVERAHVLLANAPADRAWRRRSWLVMLRAR 419
BLAST of mRNA_E-siliculosus-1a_F_contig1039.299.1 vs. uniprot
Match:
A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE)
HSP 1 Score: 121 bits (303), Expect = 8.350e-27
Identity = 73/170 (42.94%), Postives = 108/170 (63.53%), Query Frame = 1
Query: 1 MYPKREALRESCRELVAVVIDDATPKQWADWVRIPVEHAAAQGKFDLVAALLKAGGTGASGVRGRGGRTILDAAAKGGNGNVVSAILNAGAKPDLGIRSGKKKRAPLHRAALHGHEAATRVLMMAGANVNLLDG-DKRGALALAIRGGHDNVVCSLLLGGASPNGKDKKG 507
++P+R +L E+ +V A+ +QWA+W+R+P+EHAA++G +LV LL+AG +G RG GRT+LDAAA GGN +V+SA++ GA D+ + +R+ LH A GHEAA + L++ GA+VN D K L+ AI+G H +V L +GGA PN +D G
Sbjct: 3 IFPERTSLDGLGSEVFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKVTVSSRRSALHTATCCGHEAAAKRLVLTGADVNFRDPVAKCSVLSQAIQGSHTQLVNDLPIGGARPNIRDDCG 172
BLAST of mRNA_E-siliculosus-1a_F_contig1039.299.1 vs. uniprot
Match:
D7FXM2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM2_ECTSI)
HSP 1 Score: 117 bits (292), Expect = 4.190e-25
Identity = 68/107 (63.55%), Postives = 74/107 (69.16%), Query Frame = 1
Query: 106 VEHAAAQGKFDLVAALLKAGGTGASGVRGRGGRTILDAAAKGGNGNVVSAILNAGAKPDLGIRSGKKKRAPLHRAALHGHEAATRVLMMAGANVNLLDGDKRGALAL 426
+EHAAA G F+LV ALLKAGGTG G+RG GRT+LDAA A PDL RSG K+R+ LHRAALHGHEAA RVLMMAGANV LD DKRG LAL
Sbjct: 17 IEHAAANGNFELVTALLKAGGTGTPGLRGCRGRTLLDAAXXXXXXXXXXXXXXXXATPDLCARSGSKRRSALHRAALHGHEAAARVLMMAGANVGSLDADKRGPLAL 123
BLAST of mRNA_E-siliculosus-1a_F_contig1039.299.1 vs. uniprot
Match:
A0A6H5K513_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K513_9PHAE)
HSP 1 Score: 119 bits (297), Expect = 7.920e-25
Identity = 68/148 (45.95%), Postives = 95/148 (64.19%), Query Frame = 1
Query: 13 REALRESCRELVAVVIDDATPKQWADWVRIPVEHAAAQGKFDLVAALLKAGGTGASGVRGRGGRTILDAAAKGGNGNVVSAILNAGAKPDLGIRSGKKKRAPLHRAALHGHEAATRVLMMAGANVNLLD-GDKRGALALAIRGGHDNV 453
R L+ E+ +V ATP+QWA+W+R+P+EHAAA G DLV LLKAG G +G RG G RT+LDAA GGN V+SA+L AG PD + + R+ L+++ L +A R L++AGA+VN+ D +K G L A+R G D++
Sbjct: 7 RSLLKGQEVEIFKLVSKGATPEQWAEWLRVPLEHAAASGNLDLVNKLLKAGADGEAGWRGCGDRTLLDAALSGGNAGVMSALLQAGCGPDANVLAPSTGRSVLYQSILSNQKAVARELILAGADVNIKDRAEKAGPLLAAVRAGCDDL 154
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1039.299.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 5.35e-216 / Id = 77.20 Expect = 1.10e-37 / Id = 30.22 Expect = 2.05e-33 / Id = 51.45 Expect = 4.73e-33 / Id = 46.37 Expect = 4.67e-31 / Id = 45.71 Expect = 1.02e-30 / Id = 47.62 Expect = 2.34e-27 / Id = 32.27 Expect = 8.35e-27 / Id = 42.94 Expect = 4.19e-25 / Id = 63.55 Expect = 7.92e-25 / Id = 45.95 Sequence D7FT34_ECTSI A0A6H5K1F4_9PHAE A0A6H5JK08_9PHAE D8LE08_ECTSI A0A6H5JY41_9PHAE D7FXA8_ECTSI D8LBP9_ECTSI A0A6H5KNQ1_9PHAE D7FXM2_ECTSI A0A6H5K513_9PHAE Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 1 Cds size 1794 Model size 1794 Exons 8 Ec32 ortholog Ec-04_002670.1 Ec32 ortholog description Ankyrin-repeat protein similar to EsV-1-21 Hectar predicted targeting category other localisation BRITE ko00000,ko04131 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. G EggNOG OGs COG0666@1,KOG4177@2759 EggNOG free text desc. response to abiotic stimulus GOs GO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259 KEGG ko ko:K21440 Seed eggNOG ortholog 2880.D7FT34 Seed ortholog evalue 7.7e-178 Seed ortholog score 630.6 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1039.299.1
>prot_E-siliculosus-1a_F_contig1039.299.1 ID=prot_E-siliculosus-1a_F_contig1039.299.1|Name=mRNA_E-siliculosus-1a_F_contig1039.299.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=598bp
MYPKREALRESCRELVAVVIDDATPKQWADWVRIPVEHAAAQGKFDLVAA back to top mRNA from alignment at E-siliculosus-1a_F_contig1039:3662..9982+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1039.299.1 ID=mRNA_E-siliculosus-1a_F_contig1039.299.1|Name=mRNA_E-siliculosus-1a_F_contig1039.299.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6321bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1039:3662..9982+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)ATGTACCCCAAGCGAGAGGCCCTCCGAGAGTCGTGCCGAGAACTGGTCGC
CGTCGTCATCGACGATGCCACCCCTAAACAGTGGGCAGATTGGGTTCGAA
TCCCG GTGCGCGTGTCTGCTGTTGTGGGGATTGTGATGCACATACAGTGA
CAGAGGCTGACGCCCACCGATCGATGTGGTCGACAGTACGTATACCCTTC
CGTAGCTCGTATTTACCTCAATCACTGCTGAAGAAGATACACTGAAGCAA
GCTTGACTGTAGTGCGATGCTGTAAATGTGTCGCGTATCTGACCTGGACG
ATTGCATGTAGTCTCCAGGCAATAAGGAAGTGGACTATAGGGTTTCCAGG
AAACGACAACGACAACTTCGACACCCAGACAATCCGGAGAGATCACAGCG
AGAGGATGATGTCCATCACCGCACGTCGAGATGCACCACGAGCAGCGATA
GTTCCTCCGCATAAGTCGCATATACCAATCGACTTAAAAGGATACCGATA
GCGCATTGGTCTTCTACTGGACAGCTACGAACGTACAGACGCACAGATAC
ATGACAAGACTAAGTGTTACATGTTCTGCGTGCGTGCATGGAGGAAGCAA
ATCTCAAGTCGCAACGACGCGAGCATCCTGTTTCAGGGTCTGCCCCCCAG
CGATAACTGTACAAGTGACGGATCGGGAGGCTAGCCTGACTTTAACGACT
GAGAAGAACCTGCCCAAATTACATGCGATCTTGCTTTTGGGGACGGTCCC
TCGCTCCCTATATATGTTCATCGACACCTGCACTCTTGGTTCAGACGGGA
CACGTGTGCCGCACGCTTGCTGCGGGAACGGCTAGGGATAAGCAATGAGG
GCATCTACTGTCTAGGAGACCCACCTCTCTGTGACCCCAGAAAACCGAAC
AAAGAGGTTCAAACTAACACACCTCCCACGCCGAACAAATGAGGGTAGAT
CTATTACCAATCCCGTTTCACCATAAAAGGCGGTTTCGATCTACGACAAT
GCACTACTTTGCTATGTCGTCACCTCGTGGAAGTATGTAGCCTAATTGAC
GATAGCATGATATTTGAGACAACGCTGTGTGAAACGAATGACCACATTGC
AGATACTTGTGAGCAAGTGAACATATCTATCAGTATTTCCCATTGATCGT
ACTTGGTGATACGTCACGACTTGGTGGTGGTCACCAGCGTTGTCACAGAC
GTCGGAAATTTGGCGCAGCCACCCTCAGCGGTGGTGTTGAGACTGGGGAC
TATGTTACCCAGGAACGGCAGAGAGATGAAGGAAAGCAATCATGTATTAT
TCCACACGCCAGCCTCTCAGGCAAGCGGGTCACGCTATCTACTACAAGGA
ACGATCACCCCTCAGGCGAGTTCCAGGAGCACACCTGCGTGTGCTCTCCC
GGGGGGGGCGCACTTGGACCTGCGTGTGCTCTCCCGGGGGGGGCGCACTT
GGACCCCCAATCACGTACAAACCCTCACACACCTACTTCTCATAGCGTAT
CCACGCACAGATCGGATTCATACCCACGTACCACAAACAGGCACTTTGTT
CAACGATGAATCATTCCGCGTCTGACGCTGCTCAAACCACAATGTTGCGC
AGTAACGATGCCTCAAGTGTCAACCATCGAGACATATTTACTAGATTAGT
CATTTGTGTTTCTTGGTAAAACAGTGCAGACGTTACGATTCTTGACTACA
GACATTGTGTCATACCGCGTTCGCAAGCAAGAGAGAGTAACATTGTCGAG
CGCAAGCGGTCATCAAGAACCACAATTCCCTCCCTCACAACAAGCAGGTG
GAACACGCAGCGGCCCAAGGCAAGTTCGACCTCGTGGCCGCCCTTCTCAA
AGCAGGGGGCACGGGAGCATCAGGTGTGAGGGGCCGCGGCGGCCGAACTA
TCCTCGACGCGGCTGCGAAAGGCGGGAACGGAAACGTGGTCTCCGCTATC
TTGAATGCAGGCGCGAAACCGGATCTTGGGATACGTTCAGGCAAGAAAAA
AAG GTGTGTAACGCATGAGGTGCAAACTAAGGGTGTCGCCGAGAGTGTCT
ACTTCTGAGGATACTTCCAGCGCGGTTTTTCTCGGAGTTCAACTTCTCCG
CCTTTTTTGACAGGAACTTCTCTCTTTTCCTGTTGAATTGGCGGTAAAAT
AATTTGGCGGAAGACAGAGTCAATGGGATATCAAGATTGTCGGAGCCTCT
TCCGCTGAATTTGCTGCGCACAGCAGCGAACGTTTTCTTTTTCTCTTAGA
AGTGGCCAGCATGATACACTCAGGAGATCTGGAAAGATTTCAGCCAACGA
TGTTCGCAGATCTCCACAGCAGTAAATTACCGAATTTTATCCCCTTCGCT
CCCCTTGATGGCCGGTGCCCTTTCATGTGCGCGCAAACAACAGGGCCCCC
CTACACCGTGCGGCACTTCACGGACACGAGGCCGCTACCCGGGTCCTGAT
GATGGCTGGAGCGAACGTCAACTTGCTCGATGGCGACAAGCGTGGGGCGT
TGGCCCTGGCAATAAG GTAAGCAGGTAAACCATCCCTCCCAGAAGGGACG
CTGGTGGTAGTGGTAGTGGTGGTGGTGGTACCGTCGAGAAGGGGTACATT
TGTTTACATTAGTCCTACTGCTAGGCCACGCAACACCACATCGAGTAGGA
GTAGGAGGGCACCGCACATGGCAGGCAGAAATCCCCGCACACTGTGGGGT
ATGTTCTGTCGACGATAATCCTCTCCAGGGTACGGGCGGCAGCATACGTG
TGGACGAGCGACAGGCGGCCATTTGCATATCAAAAGTCGAGATATGCGAA
AATGGCTGCACCCTGGTGTGTGTGCGAGGGCAAAGAAAACAGGCCATATT
CTCTCTCTCCCCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCG
ATTCTCCCCTCTCTCCTTCAATGGGCCATCGAGAAGCCGATGCTCTCACA
CACGAGGCTCTGGCTCGCCGGGCGGGTCGTATATTCGAAACGCCGAAAAC
ATGTCTACGACCGGTTCCAAGGAAACAAACGCCACCAACGATGCATGTCG
TCAACGGTACTTGACGTCAAACGATGCTCGACGTCAACGATGCTCATCAA
CGAGAACTTCTCTACGTGTGTCCCTCGAAAAGCGACCCAATCAGAAATGA
TGCCCGATTTTCTTGCTTCGAGGCGTAAAACGAGTCGGCTTGCGTTTCCT
AGTGAACGAATTACACTGCTGTGAGCAGTGGACTGTTCACTGATAACGTG
GGAAACTGTAAGACTGCACACCATCGTAGGTTGCCTGTTCGGTCCTTGTT
CTACCTTTGGTTGTGTGGAACACATGAAAGGCTACCGTTCAAGATTAACC
CCAATCGAAGGGATGTGTTGAGCTCTGCCAAGTGAGTATTGAGGAAACCC
TGTTGGATACTGGACGTGTTAGGGTCTGCTAAGCCAATACACGGAGAGAT
CAGTGATACCAGCCCGCACAAGAGATGATGCTTGGGCTGGTAAGGAGTAA
GTGCCCTGTTGTTTGTTAGTTTTATCTACCTATTTCTCGCAGAAAACAGT
CCCAGCGACAGGCAGAGTTGCTTTATTTTCCTTTGGGTTTGACGTGTTGC
AATACGAGTCGTGCCTGCCGTTCCAAACATACACTACAGTCTTGTTCTCG
CTAGCTTAAACGCGTAGGGCTCTGCTCGCTGGACGCTCTGTTCCCTGCTT
GACACAATAGACCTAAATCCACCACCTCATCCCCTGCTTGACCGCTGGTC
GTGGTATTTCATGCTAGGGGCGGGCATGATAACGTCGTGTGTTCCCTGCT
ACTCGGAGGGGCCAGCCCGAACGGGAAGGACAAGAAGGGAGACTCTCCCT
TGCATGTCGCCGCTGCGTACGGTGGCCACGCGTGCATCGTAAGCGCGCTT
CTGCTTAAAGGCGCCGACAAGAACGCTCTGGACTTTCAGGGCCGC GTAAG
CAAGCACACTGCGCACATGGTCTAGTCGCAGAGAGACGTCCCGCAACGCC
GACCAAAAAGTAGAAGCAGCTGCGTTCCCTTGGTAGTCTCATGGGACGAC
GAGGTGAAGCCGGTTGCAACGCTTCATGCTTGGTAGGAGAGGGAATGGGG
GATAGCCTAGAACGGGGAAAACAACGCCTGTCTAGTTTCGGAGTTAATTG
ACGCCGAGAAATAGTTGTTGGAAAAGAATAAATTCAAAGTAGGCAAGATT
CTTCTCCCCCTGCGCCCCTGCTTTGTCTCGGCACGTGGTCGTTGCGATGG
CCATCTCTCTGTAGGCGAGCAAACGACGAACGAGCCCACTCTCCCTTCCC
CCTCCTTGTATGTATTCGCCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCCCTCTCTCGCTCTCTCTTCCGAAGACCCCCTTGCACATAGCGGCGC
AAGAAGGAGCCCACGGCATGGTCGGGCCTCTTCTGATGGCCGGCGCGGAC
CCCGGGATTCGGTTCGGGGAGCACGAGCTGTCGCCGCTCGACTCGGCTGT
TTCGGACGGGCGCATGGGCGTTCTGAGAGCCCTTATCCTCCACGGGGTAG
ACGTCAACGCTGGCGATTCCACCGGGTACACGGCGCTCCACACGGCGGCA
GACAACAACCAGGGAGCCGCGGCTCGCGCGCTCGTGAAGGCCGGCGCCGA
CGTCGAGGCTCGTGACGTCCGGCAGAGGAGCCCTCTTCACAGTGCCGCAA
G GTGCAACAGCGAACAAAGTCACCGTCGTCGTTGATTACCGTTATATCTC
CTACTGGTGCTGGTTTTTTGTTACGGTATCCAAGAGCCACTGAGTGAGCG
TTTGCAAATAGTGCTTTCCTTCCTCCCAAGCTGATAGGGCTGCTGTACGT
GCATCTCGGAAATCTCTTGAGTTTTTTTTATCACCGCCGTTCGCAGGTAT
AACAGCTGCTGCGATGTCGTGCGCTCGCTTTTGAGATGTGGCGCCGACCT
CGATGCCATCGAAATGGCTGGAGAGTGCCCGCTGCACATGGCGGCCAGGA
CCCAAGCTGATCGGGTAGTGGACCTCCTGCTGAG GTGCGGTGGGATTGAT
TGCCCAGGGCTAGTTTTGGCCAATCCGCCGTCCTACGACGCCAAGTGAAA
CACCTAGCGGTTATGAAGCAGGATGGAGGTGGGGACATCCAAAAGCTGAC
GCTCGTTCCAAAACAAGGCTTACTTACGTGCGTATTGACGATGTCGACGT
CGCTGTTGCCGCTGTTTCTTTTCGTTCGTTAAACTCCTTACGCACTTTTC
CCCCAGATGGGGCGCCGACGAAATGAAGGCCAATCACAACGGCGAC GTTC
CAGGGGTGTTTGGGTGTTTGCTCACAAACCATCCACCCCCACTGTACCAT
ACACTGTACGCCACTGATTTGTGCTTGAAGCAGCACCATCGGACTGTTTG
AATAAGTCACGTGTATGCAGCCCGTTTCGTGCAGTGATGTGTCCCAAACG
AATGTTCGGCACTTCAGGAGAGGTGGTCAACGTTTCTATAGCGCGATTGT
GCAGCGTAGATACCACCCGGCCTGCTGATGGCGTGCGAAAAATATCTAAA
GATGTTGCAGACCCCCCGTATAGAGTCCACCGAATCAGTCAATAACCCGA
AATGCCATTTTCTCCTGAATACCTCTTGGATCGCCGTTAGAAACACGTGC
CAGTGCCCTTGCTGCACTTCGTACCACGACACACAGCCGATGTTGTCGGG
ACCACCGTGGCGGACGACGAGCCAGTGCTCTCGGAAGGGCAGAGGAAAGA
GAGAAAGGAGCGCGTGACTCGCCTGCTGGCGAATGCCCACGTCGACAGGA
CCTGGCGCCGGCGCGGGTGGCTTGTCCTCTGCCGCAGCCGCTACCTCTTG
AGCAAGATGCCGCGCGACATTGTGGATTGCCACCAAGGTGAAGTAGGTGA
AGATCTGCTCAGGAGTGGGAGTCGCAGTAATGCGAAGAAGGAAAGTAGCG
GTGGACGAAATCGTGCCGCGAAGATGCACCGTACGATGTCAGCGGGAGGT
GGAGGAGGAGGGGGAGGAGGAGGGGGGGGAGGAGGAAGGAGCCACCACAG
TGGTGCCACCTCTCCACTTTTCGGGCAAGCCCCTGGTGACGGCGATGACA
ACGGCCGTGTCGCTGCTGTCGACGCTACCACCAGCACTCGAGCAAACGGC
ATCGGGATTGGAGGAGGAGCCCCCAACTCAGGTGGCAACGATAGCGACGA
TAGCGATGATGGTACCGACCGGATCGAAGCCCGCCTCAAGTCGTCTGGTG
TTTGCTTTGCGCTACTGGCGCTGGCGGAAGTGGAGGAGGGGTTGTTCCGT
AAGGTTGCCGCATATATATGA back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1039:3662..9982+
>mRNA_E-siliculosus-1a_F_contig1039.299.1 ID=mRNA_E-siliculosus-1a_F_contig1039.299.1|Name=mRNA_E-siliculosus-1a_F_contig1039.299.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3588bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1039:3662..9982+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top