prot_E-siliculosus-1a_F_contig10365.288.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10365.288.1
Unique Nameprot_E-siliculosus-1a_F_contig10365.288.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length186
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match: A0A6H5JUC1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC1_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 2.090e-9
Identity = 29/43 (67.44%), Postives = 36/43 (83.72%), Query Frame = 0 
Query:    1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQG 43
            GKY EAEPLY+RCQ ++   LGP+HPSLA+TL+NRA +L AQG
Sbjct:  187 GKYSEAEPLYDRCQAMKGKALGPEHPSLAATLNNRAELLRAQG 229
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BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 2.350e-9
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 0 
Query:    1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQ 42
            GKY +AEPLYERCQ I E  LGP+HP +A+TL+NRAG+L AQ
Sbjct:  941 GKYTDAEPLYERCQAIYEKRLGPEHPYVATTLNNRAGLLEAQ 982
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BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match: A0A6H5K3K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 6.620e-9
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0 
Query:    1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQ 42
            GKY+EAEPLYER Q I+E VLG +HP +AS+L+NR  +L AQ
Sbjct:   19 GKYMEAEPLYERSQAIQEKVLGLEHPDVASSLNNRVELLRAQ 60
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BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match: UPI0013D29528 (tetratricopeptide repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528)

HSP 1 Score: 58.5 bits (140), Expect = 2.450e-8
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0 
Query:    1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGM 38
            GKY EAEPLY+R   I E VLGPDHPS+A+TL+N AG+
Sbjct:    5 GKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42
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BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 5.910e-8
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 0 
Query:    1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQ 42
            GKY +AEPL ER QTI E VLGP+HP +A +L+NRAG+L AQ
Sbjct:  499 GKYDDAEPLNERSQTIREKVLGPEHPDVAQSLNNRAGLLEAQ 540
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BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 6.220e-8
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0 
Query:    1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQ 42
            GKY EAEPLYER Q I+ENVLGP+HP + ++L+NRA +L  Q
Sbjct:  661 GKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLLEKQ 702
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BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match: A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 8.110e-8
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 0 
Query:    1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQ 42
            GKY EAEPLYER Q I E  LGP+HP++A+ L+NRAG+L  Q
Sbjct:   31 GKYAEAEPLYERWQAIFETALGPEHPNVATALNNRAGLLEDQ 72
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BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 2.290e-7
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 0 
Query:    1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGML 39
            GKY EAEPLYER   I+E VLGP+HP +A++LDNRA +L
Sbjct:  694 GKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLL 732
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BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match: A0A6H5JPL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL8_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 2.480e-7
Identity = 28/42 (66.67%), Postives = 31/42 (73.81%), Query Frame = 0 
Query:    1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQ 42
            GKY EA PLY RCQ I+E VLGPDHP LA+TL N A +L  Q
Sbjct:   22 GKYTEAGPLYARCQAIQEAVLGPDHPRLATTLGNWAALLYEQ 63
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BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 3.140e-7
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 0 
Query:    1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQ 42
            GKY EA+PLY R   I EN LGPDHP+LA+ L+NRAG+L +Q
Sbjct:  613 GKYAEADPLYLRAIEIGENTLGPDHPALATQLNNRAGLLGSQ 654
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5JUC1_9PHAE2.090e-967.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JJK0_9PHAE2.350e-969.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3K8_9PHAE6.620e-964.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0013D295282.450e-868.42tetratricopeptide repeat protein n=1 Tax=Desulfoba... [more]
A0A6H5KIY6_9PHAE5.910e-866.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXS7_9PHAE6.220e-864.29NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5K5H9_9PHAE8.110e-864.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G722_ECTSI2.290e-766.67NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5JPL8_9PHAE2.480e-766.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6W2_ECTSI3.140e-764.29NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 153..173
score: 62.86
coord: 109..126
score: 48.89
coord: 44..62
score: 31.05
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 113..146
e-value: 0.0075
score: 25.5
coord: 29..62
e-value: 14.0
score: 13.8
coord: 155..186
e-value: 22.0
score: 12.0
IPR010069Filamentous haemagglutinin, 20-residue x2 repeatTIGRFAMTIGR01731TIGR01731coord: 113..127
e-value: 0.6
score: 8.2
coord: 29..43
e-value: 0.0036
score: 15.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..186
e-value: 6.4E-65
score: 220.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 66..184
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..98
NoneNo IPR availablePFAMPF13424TPR_12coord: 111..186
e-value: 5.8E-24
score: 84.2
coord: 1..59
e-value: 1.1E-14
score: 54.5
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 1..85
coord: 75..186
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 1..85
coord: 75..186
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..186
score: 12.629

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10365contigE-siliculosus-1a_F_contig10365:1129..2539 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10365.288.1mRNA_E-siliculosus-1a_F_contig10365.288.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10365 1129..2539 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10365.288.1 ID=prot_E-siliculosus-1a_F_contig10365.288.1|Name=mRNA_E-siliculosus-1a_F_contig10365.288.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=186bp
GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQGKFAEAQP
LFERALAINEVALGVDHPSTITSRAWMADLYKNQGFLDKASPLLEEVVSA
RERVQGRDHPDVASALNNRAGLLRAQGKYEEAEPLYERSQAIREKVLGPE
HPDVAQSLNNRAELLRAQGKYEEAEPLYERSQAIRE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
IPR010069Fil_hemagglutn_20-aa_x2_rpt
IPR019734TPR_repeat
IPR002151Kinesin_light