prot_E-siliculosus-1a_F_contig14953.2879.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig14953.2879.1
Unique Nameprot_E-siliculosus-1a_F_contig14953.2879.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length333
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: A0A0F9YCN4_9ZZZZ (DctM domain-containing protein n=17 Tax=root TaxID=1 RepID=A0A0F9YCN4_9ZZZZ)

HSP 1 Score: 610 bits (1572), Expect = 4.540e-218
Identity = 324/333 (97.30%), Postives = 327/333 (98.20%), Query Frame = 0
Query:    1 MTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 333
            MTRGQSAS LIDM+MTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFS YSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAI LEFI+FRSLK PDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQ IL AVGINEAGPLGVLIAIS+AFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF
Sbjct:   70 MTRGQSASRLIDMVMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSAYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAIFLEFIVFRSLKFPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQAILEAVGINEAGPLGVLIAISVAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 402          
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: A0A1K1Y6K4_9GAMM (TRAP transporter, DctM subunit n=2 Tax=Marinospirillum TaxID=64968 RepID=A0A1K1Y6K4_9GAMM)

HSP 1 Score: 564 bits (1453), Expect = 5.890e-200
Identity = 293/332 (88.25%), Postives = 311/332 (93.67%), Query Frame = 0
Query:    1 MTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFI 332
            MTRGQSAS LI+M+M F+GH+KGGLAVSTA SCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIIN+SDIAFLIPPSIGMIIYGVIS TSI ELFIAGIGPGL+IL MFS Y + YAIINKVPTEPKASWK R  AVQ+ALWPLGFPV+IVGGIYGGVFSPTEAAAACVLYA++LEFI+FRSLKL DIY IAKSTGLITAVVFILVA GNGFSWIISFAQIPQ IL  +GINEAGP GVLIAI++AFF+ACMFVDPIVVILVLTPIFAPAIA +GLDPVLVGVLITL VAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPF+
Sbjct:   70 MTRGQSASRLINMVMAFIGHIKGGLAVSTATSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINASDIAFLIPPSIGMIIYGVISGTSIGELFIAGIGPGLLILAMFSAYCIAYAIINKVPTEPKASWKERLTAVQQALWPLGFPVIIVGGIYGGVFSPTEAAAACVLYAVVLEFIVFRSLKLMDIYRIAKSTGLITAVVFILVAVGNGFSWIISFAQIPQAILGGLGINEAGPTGVLIAIAVAFFIACMFVDPIVVILVLTPIFAPAIAGTGLDPVLVGVLITLMVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFV 401          
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: A0A2N7TUV2_9GAMM (C4-dicarboxylate ABC transporter permease n=1 Tax=Halomonas endophytica TaxID=2033802 RepID=A0A2N7TUV2_9GAMM)

HSP 1 Score: 563 bits (1450), Expect = 1.690e-199
Identity = 292/333 (87.69%), Postives = 314/333 (94.29%), Query Frame = 0
Query:    1 MTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 333
            MTRGQSA+ LIDM+M+FVGHVKGGLAVSTA SCTLFGAVSGSTQATVVAVG PLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIG IIYG++S TSI+ELFIAGIGPGL+ILLMF+IYSV+YA ++ VPTEPKA+W  R  A Q+ALWPLGFP+LIVGGIYGG+FSPTEAAAACVLYA  LEF+IFRSLK+  I+TIA+STGLITAVVFILVA GN F+WIISFAQIPQTILAAVGINEAGP+GVL+ ISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF
Sbjct:   70 MTRGQSANRLIDMVMSFVGHVKGGLAVSTATSCTLFGAVSGSTQATVVAVGGPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGFIIYGIVSGTSISELFIAGIGPGLLILLMFAIYSVIYATVHNVPTEPKATWGQRLTATQRALWPLGFPILIVGGIYGGIFSPTEAAAACVLYAFFLEFLIFRSLKVSHIFTIARSTGLITAVVFILVAVGNSFAWIISFAQIPQTILAAVGINEAGPVGVLVVISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 402          
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: UPI000DAE4914 (TRAP transporter large permease n=1 Tax=Halomonas lactosivorans TaxID=2185141 RepID=UPI000DAE4914)

HSP 1 Score: 556 bits (1432), Expect = 9.240e-197
Identity = 286/333 (85.89%), Postives = 313/333 (93.99%), Query Frame = 0
Query:    1 MTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 333
            MTRGQSA  LI+M+M F+GH+KGGLAVSTA SCTLFGAVSGSTQATVVAVGSPLRPRMLKAGY DSFTLALIIN+SDIAFLIPPSIGMIIYGVIS TSI ELFIAGIGPGL+ILLMF+IYS++YA++  VPTEP++SW+ RA+A++ ALWPLGFPV+IVGGIYGGVFSPTEAAAACVLYA+LLEF++FRSL L DIY IAKSTGLITAVVFILVA GNGFSWIISFAQIPQ ILAAVGI+EAGP GVLIAI +AFFVACMFVDPIVVILVLTPIF PAI A+GLDPVLVG+LITLQVAIGSATPPFGCDIFTAIAIFKRPYW+VI+GTPPFIF
Sbjct:   70 MTRGQSAERLINMVMAFIGHIKGGLAVSTAASCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYSDSFTLALIINASDIAFLIPPSIGMIIYGVISGTSIGELFIAGIGPGLLILLMFAIYSMIYAVVRDVPTEPRSSWRERALAIRDALWPLGFPVIIVGGIYGGVFSPTEAAAACVLYAVLLEFVVFRSLGLRDIYAIAKSTGLITAVVFILVAVGNGFSWIISFAQIPQEILAAVGIDEAGPTGVLIAICVAFFVACMFVDPIVVILVLTPIFTPAIEATGLDPVLVGILITLQVAIGSATPPFGCDIFTAIAIFKRPYWDVIKGTPPFIF 402          
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: A0A839V4V5_9GAMM (Tripartite ATP-independent transporter DctM subunit n=1 Tax=Halomonas cerina TaxID=447424 RepID=A0A839V4V5_9GAMM)

HSP 1 Score: 553 bits (1425), Expect = 1.070e-195
Identity = 284/333 (85.29%), Postives = 311/333 (93.39%), Query Frame = 0
Query:    1 MTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 333
            MTRGQSA  LI+M+M+F+GHVKGGLAVSTA SCTLFGAVSGSTQATVVAVGSPLRP++LKAGY DSFTLALIIN+SDIAFLIPPSIGMIIYGVIS TSIAELFIAGIGPGL+ILLMFS Y ++YA+I  VPTEPK++W+ RAVAV++ALWPLGFPV+IVGGIYGG+FSPTEAAAACVLYA+ LEF++FRSLKL  IY IAKSTGLITAVVFILV  GNGFSWIISFAQIPQ +LAA GINEAGP GVLIAI IAFFVACMFVDPIVVILVLTPIF PAI A+GLDPVLVG+LITLQVAIGSATPPFGCDIFTAIAIFKRPYW+VI+GTPPF+F
Sbjct:   70 MTRGQSAERLINMVMSFIGHVKGGLAVSTAASCTLFGAVSGSTQATVVAVGSPLRPKLLKAGYSDSFTLALIINASDIAFLIPPSIGMIIYGVISGTSIAELFIAGIGPGLLILLMFSTYCILYAVIKNVPTEPKSTWRDRAVAVRQALWPLGFPVIIVGGIYGGIFSPTEAAAACVLYAVFLEFVVFRSLKLHHIYAIAKSTGLITAVVFILVGVGNGFSWIISFAQIPQELLAAAGINEAGPTGVLIAICIAFFVACMFVDPIVVILVLTPIFTPAIEATGLDPVLVGILITLQVAIGSATPPFGCDIFTAIAIFKRPYWDVIKGTPPFVF 402          
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: UPI0003F780C6 (TRAP transporter large permease n=1 Tax=Marinospirillum minutulum TaxID=64974 RepID=UPI0003F780C6)

HSP 1 Score: 553 bits (1425), Expect = 1.070e-195
Identity = 282/333 (84.68%), Postives = 311/333 (93.39%), Query Frame = 0
Query:    1 MTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 333
            MTRGQSA+ L+D++M F+GH+KGGLAVSTA SCTLFGAVSGSTQATVVAVGSP+RPRMLKAGYKDSF LALI+NSSDIAFLIPPSIGMIIYGVIS TSI ELFIAGIGPGL+IL +FSIY V+YA +NKVPTEP+ASW  R  A+++ALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYA++LEF++FRSLK+ DIY IAKSTGLITAVVFILVA GNGFSWIISFA IPQT+LA +GINEAGP GVL+ I++ FFVACMFVDPIVVILVLTPIFAPAIA++GLDPVLVGVLITL VAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPF+F
Sbjct:   70 MTRGQSANRLVDLVMAFIGHIKGGLAVSTAASCTLFGAVSGSTQATVVAVGSPMRPRMLKAGYKDSFILALIVNSSDIAFLIPPSIGMIIYGVISGTSIGELFIAGIGPGLLILFVFSIYCVIYATLNKVPTEPRASWSERLTALRQALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAVILEFVVFRSLKMADIYKIAKSTGLITAVVFILVAVGNGFSWIISFAHIPQTLLAGIGINEAGPHGVLVIIALTFFVACMFVDPIVVILVLTPIFAPAIASTGLDPVLVGVLITLIVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFVF 402          
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: A0A063XYK5_9GAMM (TRAP-type C4-dicarboxylate transport system, large permease component n=5 Tax=Oceanospirillales TaxID=135619 RepID=A0A063XYK5_9GAMM)

HSP 1 Score: 553 bits (1424), Expect = 1.520e-195
Identity = 282/333 (84.68%), Postives = 311/333 (93.39%), Query Frame = 0
Query:    1 MTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 333
            MTRGQSA+ LI+M+M F+GH+KGGLAVSTA SCTLFGAVSGSTQATVVAVGSPLRP++LKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVIS TSI ELFIAG+GPGL+IL MFS Y + YA I+KVPTEPK+SWK R +A++ ALWPLGFPV+IVGGIYGG+FSPTEAAAACVLYA++LEFI+FRSLK  DIY IAKSTGLITAVVFILVA GNGFSWIISFAQIPQ IL  +GI++AGP+GVL AI+IAFF+ACMFVDPIVVILVLTPIFAPAIA++GLDPVLVGVLITL VAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPF+F
Sbjct:   70 MTRGQSANRLINMVMAFIGHIKGGLAVSTAASCTLFGAVSGSTQATVVAVGSPLRPKLLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISGTSIGELFIAGVGPGLLILAMFSAYCIAYAYIHKVPTEPKSSWKERLIAIKDALWPLGFPVIIVGGIYGGIFSPTEAAAACVLYAVILEFIVFRSLKATDIYRIAKSTGLITAVVFILVAVGNGFSWIISFAQIPQAILGGLGIDQAGPIGVLFAIAIAFFIACMFVDPIVVILVLTPIFAPAIASTGLDPVLVGVLITLMVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFVF 402          
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: UPI00124DD151 (TRAP transporter large permease n=1 Tax=Nitrincola alkalilacustris TaxID=1571224 RepID=UPI00124DD151)

HSP 1 Score: 552 bits (1422), Expect = 3.070e-195
Identity = 284/333 (85.29%), Postives = 308/333 (92.49%), Query Frame = 0
Query:    1 MTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 333
            MTRGQSA+ L++M+M F+GH+KGGLAVSTA SCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVIS TSI ELFIAGIGPGL+IL +FSIY + YAII+ VPTEPK  W  R  AVQ+ALWPLGFPV+IVGGIYGGVFSPTEAAAACVLYA++LEFI+FRSLK  DIY IAKSTGLITAVVFILVA GNGFSWIISFAQIPQ +L   GINEAGP GVLIAI++AFF+ACMFVDPIVVILVLTPIFAPAI+++GLDPVLVG+LITL VAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPF+F
Sbjct:   70 MTRGQSANRLVNMVMAFIGHIKGGLAVSTAASCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISGTSIGELFIAGIGPGLLILFLFSIYCIAYAIIHDVPTEPKTGWMERLKAVQEALWPLGFPVIIVGGIYGGVFSPTEAAAACVLYAVILEFIVFRSLKAIDIYKIAKSTGLITAVVFILVAVGNGFSWIISFAQIPQALLGTFGINEAGPTGVLIAIAVAFFIACMFVDPIVVILVLTPIFAPAISSTGLDPVLVGILITLMVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFVF 402          
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: UPI000FD72A0B (TRAP transporter large permease n=2 Tax=Saccharospirillum TaxID=231683 RepID=UPI000FD72A0B)

HSP 1 Score: 551 bits (1419), Expect = 8.780e-195
Identity = 284/333 (85.29%), Postives = 308/333 (92.49%), Query Frame = 0
Query:    1 MTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 333
            MTRGQSA+ LIDM+M+F+GHVKGGLA+STA SCTLFGAVSGSTQATVVAVGSPLRP+MLKAGY D FTLALIIN+SDIAFLIPPSIGMIIYGVIS+TSIAELFIAG+GPGLMIL  FS+Y+++YA  N VPTEPKASW  R  AV  ALWPL FPV+IVGGIYGG+FSPTEAAA CVLYA+ LEFI+FR LKLPD+Y IAKSTGLITAVVFILVA GNGFSWIISFAQIPQ+IL AVG+NE GP GVLI+I IAFF+ACMFVDPIVVILVLTPIFAPAIAA+GLDPVLVG+LITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF
Sbjct:   70 MTRGQSANRLIDMVMSFIGHVKGGLAISTATSCTLFGAVSGSTQATVVAVGSPLRPKMLKAGYSDPFTLALIINASDIAFLIPPSIGMIIYGVISETSIAELFIAGVGPGLMILAFFSLYALIYAYRNNVPTEPKASWNERGKAVLGALWPLMFPVIIVGGIYGGIFSPTEAAAVCVLYAVFLEFIVFRELKLPDMYRIAKSTGLITAVVFILVAVGNGFSWIISFAQIPQSILEAVGVNEMGPAGVLISICIAFFIACMFVDPIVVILVLTPIFAPAIAATGLDPVLVGILITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 402          
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: A4B9I7_9GAMM (TRAP dicarboxylate transporter, DctM subunit n=2 Tax=Reinekea TaxID=230494 RepID=A4B9I7_9GAMM)

HSP 1 Score: 549 bits (1415), Expect = 2.980e-194
Identity = 280/333 (84.08%), Postives = 312/333 (93.69%), Query Frame = 0
Query:    1 MTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 333
            MTRG SA  LIDM+M+F+GHVKGGLAVSTA SCTLFGAVSGSTQATVVA+GSPLRP+MLKAGY DSFTLALIIN+SDIAFLIPPSIGMIIYGVIS+TSIAELFIAG+GPGL+IL++FSIY ++YA +N +PTE K++WK RA AVQ A+WPL FPV+IVGGIYGG+FSPTEAAA CVLYA+LLEF+IF+SLKLPD+YTIAKSTGLITAVVFILV  GNGFSWIISFAQIPQTIL AVG+N+ GP GVLI+I +AFFVACMFVDPIVVILVLTPIFAPAIAA+GLDPV VG+LITLQVAIGSATPPFGCDIFTAIAIFK+PYWEVI+GTPPFIF
Sbjct:   65 MTRGHSADRLIDMVMSFIGHVKGGLAVSTAASCTLFGAVSGSTQATVVAIGSPLRPKMLKAGYSDSFTLALIINASDIAFLIPPSIGMIIYGVISETSIAELFIAGVGPGLLILVLFSIYCLIYATVNNLPTEEKSTWKQRAKAVQLAVWPLMFPVIIVGGIYGGIFSPTEAAAVCVLYAVLLEFVIFKSLKLPDMYTIAKSTGLITAVVFILVGVGNGFSWIISFAQIPQTILDAVGVNDMGPTGVLISICVAFFVACMFVDPIVVILVLTPIFAPAIAATGLDPVHVGILITLQVAIGSATPPFGCDIFTAIAIFKKPYWEVIKGTPPFIF 397          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0F9YCN4_9ZZZZ4.540e-21897.30DctM domain-containing protein n=17 Tax=root TaxID... [more]
A0A1K1Y6K4_9GAMM5.890e-20088.25TRAP transporter, DctM subunit n=2 Tax=Marinospiri... [more]
A0A2N7TUV2_9GAMM1.690e-19987.69C4-dicarboxylate ABC transporter permease n=1 Tax=... [more]
UPI000DAE49149.240e-19785.89TRAP transporter large permease n=1 Tax=Halomonas ... [more]
A0A839V4V5_9GAMM1.070e-19585.29Tripartite ATP-independent transporter DctM subuni... [more]
UPI0003F780C61.070e-19584.68TRAP transporter large permease n=1 Tax=Marinospir... [more]
A0A063XYK5_9GAMM1.520e-19584.68TRAP-type C4-dicarboxylate transport system, large... [more]
UPI00124DD1513.070e-19585.29TRAP transporter large permease n=1 Tax=Nitrincola... [more]
UPI000FD72A0B8.780e-19585.29TRAP transporter large permease n=2 Tax=Saccharosp... [more]
A4B9I7_9GAMM2.980e-19484.08TRAP dicarboxylate transporter, DctM subunit n=2 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004681TRAP transporter large membrane protein DctMTIGRFAMTIGR00786TIGR00786coord: 1..332
e-value: 1.3E-90
score: 302.0
IPR004681TRAP transporter large membrane protein DctMPANTHERPTHR33362FAMILY NOT NAMEDcoord: 1..332
IPR010656TRAP C4-dicarboxylate transport system permease DctM subunitPFAMPF06808DctMcoord: 1..333
e-value: 3.8E-82
score: 276.3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 167..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 226..244
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 92..102
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..191
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 300..333
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 245..271
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..166
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 192..202
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 272..277
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 203..225
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 278..299
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..147
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..33
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.47
NoneNo IPR availableTMHMMTMhelixcoord: 265..284
NoneNo IPR availableTMHMMTMhelixcoord: 172..191
NoneNo IPR availableTMHMMTMhelixcoord: 148..167
NoneNo IPR availableTMHMMTMhelixcoord: 236..258
NoneNo IPR availableTMHMMTMhelixcoord: 204..226
NoneNo IPR availableTMHMMTMhelixcoord: 105..127
NoneNo IPR availableTMHMMTMhelixcoord: 294..316
NoneNo IPR availableTMHMMTMhelixcoord: 78..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14953contigE-siliculosus-1a_F_contig14953:30..1028 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14953.2879.1mRNA_E-siliculosus-1a_F_contig14953.2879.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig14953 3..1028 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig14953.2879.1 ID=prot_E-siliculosus-1a_F_contig14953.2879.1|Name=mRNA_E-siliculosus-1a_F_contig14953.2879.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=333bp
MTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAV
GSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIA
ELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALW
PLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIA
KSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIA
ISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIG
SATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010656DctM
IPR004681TRAP_DctM