mRNA_E-siliculosus-1a_F_contig14953.2879.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: A0A0F9YCN4_9ZZZZ (DctM domain-containing protein n=17 Tax=root TaxID=1 RepID=A0A0F9YCN4_9ZZZZ) HSP 1 Score: 625 bits (1612), Expect = 5.290e-224 Identity = 332/342 (97.08%), Postives = 336/342 (98.25%), Query Frame = 1
Query: 1 PLFILAADIMTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 1026
P+FILAADIMTRGQSAS LIDM+MTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFS YSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAI LEFI+FRSLK PDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQ IL AVGINEAGPLGVLIAIS+AFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF
Sbjct: 61 PMFILAADIMTRGQSASRLIDMVMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSAYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAIFLEFIVFRSLKFPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQAILEAVGINEAGPLGVLIAISVAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 402
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: A0A1K1Y6K4_9GAMM (TRAP transporter, DctM subunit n=2 Tax=Marinospirillum TaxID=64968 RepID=A0A1K1Y6K4_9GAMM) HSP 1 Score: 579 bits (1493), Expect = 6.900e-206 Identity = 301/341 (88.27%), Postives = 320/341 (93.84%), Query Frame = 1
Query: 1 PLFILAADIMTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFI 1023
P+FILAADIMTRGQSAS LI+M+M F+GH+KGGLAVSTA SCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIIN+SDIAFLIPPSIGMIIYGVIS TSI ELFIAGIGPGL+IL MFS Y + YAIINKVPTEPKASWK R AVQ+ALWPLGFPV+IVGGIYGGVFSPTEAAAACVLYA++LEFI+FRSLKL DIY IAKSTGLITAVVFILVA GNGFSWIISFAQIPQ IL +GINEAGP GVLIAI++AFF+ACMFVDPIVVILVLTPIFAPAIA +GLDPVLVGVLITL VAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPF+
Sbjct: 61 PMFILAADIMTRGQSASRLINMVMAFIGHIKGGLAVSTATSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINASDIAFLIPPSIGMIIYGVISGTSIGELFIAGIGPGLLILAMFSAYCIAYAIINKVPTEPKASWKERLTAVQQALWPLGFPVIIVGGIYGGVFSPTEAAAACVLYAVVLEFIVFRSLKLMDIYRIAKSTGLITAVVFILVAVGNGFSWIISFAQIPQAILGGLGINEAGPTGVLIAIAVAFFIACMFVDPIVVILVLTPIFAPAIAGTGLDPVLVGVLITLMVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFV 401
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: A0A2N7TUV2_9GAMM (C4-dicarboxylate ABC transporter permease n=1 Tax=Halomonas endophytica TaxID=2033802 RepID=A0A2N7TUV2_9GAMM) HSP 1 Score: 578 bits (1490), Expect = 1.970e-205 Identity = 300/342 (87.72%), Postives = 323/342 (94.44%), Query Frame = 1
Query: 1 PLFILAADIMTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 1026
P+FILAADIMTRGQSA+ LIDM+M+FVGHVKGGLAVSTA SCTLFGAVSGSTQATVVAVG PLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIG IIYG++S TSI+ELFIAGIGPGL+ILLMF+IYSV+YA ++ VPTEPKA+W R A Q+ALWPLGFP+LIVGGIYGG+FSPTEAAAACVLYA LEF+IFRSLK+ I+TIA+STGLITAVVFILVA GN F+WIISFAQIPQTILAAVGINEAGP+GVL+ ISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF
Sbjct: 61 PMFILAADIMTRGQSANRLIDMVMSFVGHVKGGLAVSTATSCTLFGAVSGSTQATVVAVGGPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGFIIYGIVSGTSISELFIAGIGPGLLILLMFAIYSVIYATVHNVPTEPKATWGQRLTATQRALWPLGFPILIVGGIYGGIFSPTEAAAACVLYAFFLEFLIFRSLKVSHIFTIARSTGLITAVVFILVAVGNSFAWIISFAQIPQTILAAVGINEAGPVGVLVVISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 402
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: UPI000DAE4914 (TRAP transporter large permease n=1 Tax=Halomonas lactosivorans TaxID=2185141 RepID=UPI000DAE4914) HSP 1 Score: 571 bits (1472), Expect = 1.080e-202 Identity = 294/342 (85.96%), Postives = 322/342 (94.15%), Query Frame = 1
Query: 1 PLFILAADIMTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 1026
P+FILAADIMTRGQSA LI+M+M F+GH+KGGLAVSTA SCTLFGAVSGSTQATVVAVGSPLRPRMLKAGY DSFTLALIIN+SDIAFLIPPSIGMIIYGVIS TSI ELFIAGIGPGL+ILLMF+IYS++YA++ VPTEP++SW+ RA+A++ ALWPLGFPV+IVGGIYGGVFSPTEAAAACVLYA+LLEF++FRSL L DIY IAKSTGLITAVVFILVA GNGFSWIISFAQIPQ ILAAVGI+EAGP GVLIAI +AFFVACMFVDPIVVILVLTPIF PAI A+GLDPVLVG+LITLQVAIGSATPPFGCDIFTAIAIFKRPYW+VI+GTPPFIF
Sbjct: 61 PMFILAADIMTRGQSAERLINMVMAFIGHIKGGLAVSTAASCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYSDSFTLALIINASDIAFLIPPSIGMIIYGVISGTSIGELFIAGIGPGLLILLMFAIYSMIYAVVRDVPTEPRSSWRERALAIRDALWPLGFPVIIVGGIYGGVFSPTEAAAACVLYAVLLEFVVFRSLGLRDIYAIAKSTGLITAVVFILVAVGNGFSWIISFAQIPQEILAAVGIDEAGPTGVLIAICVAFFVACMFVDPIVVILVLTPIFTPAIEATGLDPVLVGILITLQVAIGSATPPFGCDIFTAIAIFKRPYWDVIKGTPPFIF 402
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: A0A839V4V5_9GAMM (Tripartite ATP-independent transporter DctM subunit n=1 Tax=Halomonas cerina TaxID=447424 RepID=A0A839V4V5_9GAMM) HSP 1 Score: 568 bits (1465), Expect = 1.260e-201 Identity = 292/342 (85.38%), Postives = 320/342 (93.57%), Query Frame = 1
Query: 1 PLFILAADIMTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 1026
P+FILAADIMTRGQSA LI+M+M+F+GHVKGGLAVSTA SCTLFGAVSGSTQATVVAVGSPLRP++LKAGY DSFTLALIIN+SDIAFLIPPSIGMIIYGVIS TSIAELFIAGIGPGL+ILLMFS Y ++YA+I VPTEPK++W+ RAVAV++ALWPLGFPV+IVGGIYGG+FSPTEAAAACVLYA+ LEF++FRSLKL IY IAKSTGLITAVVFILV GNGFSWIISFAQIPQ +LAA GINEAGP GVLIAI IAFFVACMFVDPIVVILVLTPIF PAI A+GLDPVLVG+LITLQVAIGSATPPFGCDIFTAIAIFKRPYW+VI+GTPPF+F
Sbjct: 61 PMFILAADIMTRGQSAERLINMVMSFIGHVKGGLAVSTAASCTLFGAVSGSTQATVVAVGSPLRPKLLKAGYSDSFTLALIINASDIAFLIPPSIGMIIYGVISGTSIAELFIAGIGPGLLILLMFSTYCILYAVIKNVPTEPKSTWRDRAVAVRQALWPLGFPVIIVGGIYGGIFSPTEAAAACVLYAVFLEFVVFRSLKLHHIYAIAKSTGLITAVVFILVGVGNGFSWIISFAQIPQELLAAAGINEAGPTGVLIAICIAFFVACMFVDPIVVILVLTPIFTPAIEATGLDPVLVGILITLQVAIGSATPPFGCDIFTAIAIFKRPYWDVIKGTPPFVF 402
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: A0A063XYK5_9GAMM (TRAP-type C4-dicarboxylate transport system, large permease component n=5 Tax=Oceanospirillales TaxID=135619 RepID=A0A063XYK5_9GAMM) HSP 1 Score: 568 bits (1464), Expect = 1.790e-201 Identity = 290/342 (84.80%), Postives = 320/342 (93.57%), Query Frame = 1
Query: 1 PLFILAADIMTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 1026
P+FILAADIMTRGQSA+ LI+M+M F+GH+KGGLAVSTA SCTLFGAVSGSTQATVVAVGSPLRP++LKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVIS TSI ELFIAG+GPGL+IL MFS Y + YA I+KVPTEPK+SWK R +A++ ALWPLGFPV+IVGGIYGG+FSPTEAAAACVLYA++LEFI+FRSLK DIY IAKSTGLITAVVFILVA GNGFSWIISFAQIPQ IL +GI++AGP+GVL AI+IAFF+ACMFVDPIVVILVLTPIFAPAIA++GLDPVLVGVLITL VAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPF+F
Sbjct: 61 PMFILAADIMTRGQSANRLINMVMAFIGHIKGGLAVSTAASCTLFGAVSGSTQATVVAVGSPLRPKLLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISGTSIGELFIAGVGPGLLILAMFSAYCIAYAYIHKVPTEPKSSWKERLIAIKDALWPLGFPVIIVGGIYGGIFSPTEAAAACVLYAVILEFIVFRSLKATDIYRIAKSTGLITAVVFILVAVGNGFSWIISFAQIPQAILGGLGIDQAGPIGVLFAIAIAFFIACMFVDPIVVILVLTPIFAPAIASTGLDPVLVGVLITLMVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFVF 402
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: UPI00124DD151 (TRAP transporter large permease n=1 Tax=Nitrincola alkalilacustris TaxID=1571224 RepID=UPI00124DD151) HSP 1 Score: 567 bits (1462), Expect = 3.600e-201 Identity = 292/342 (85.38%), Postives = 317/342 (92.69%), Query Frame = 1
Query: 1 PLFILAADIMTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 1026
P+FILAADIMTRGQSA+ L++M+M F+GH+KGGLAVSTA SCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVIS TSI ELFIAGIGPGL+IL +FSIY + YAII+ VPTEPK W R AVQ+ALWPLGFPV+IVGGIYGGVFSPTEAAAACVLYA++LEFI+FRSLK DIY IAKSTGLITAVVFILVA GNGFSWIISFAQIPQ +L GINEAGP GVLIAI++AFF+ACMFVDPIVVILVLTPIFAPAI+++GLDPVLVG+LITL VAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPF+F
Sbjct: 61 PMFILAADIMTRGQSANRLVNMVMAFIGHIKGGLAVSTAASCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISGTSIGELFIAGIGPGLLILFLFSIYCIAYAIIHDVPTEPKTGWMERLKAVQEALWPLGFPVIIVGGIYGGVFSPTEAAAACVLYAVILEFIVFRSLKAIDIYKIAKSTGLITAVVFILVAVGNGFSWIISFAQIPQALLGTFGINEAGPTGVLIAIAVAFFIACMFVDPIVVILVLTPIFAPAISSTGLDPVLVGILITLMVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFVF 402
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: UPI0003F780C6 (TRAP transporter large permease n=1 Tax=Marinospirillum minutulum TaxID=64974 RepID=UPI0003F780C6) HSP 1 Score: 566 bits (1460), Expect = 7.250e-201 Identity = 288/342 (84.21%), Postives = 319/342 (93.27%), Query Frame = 1
Query: 1 PLFILAADIMTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 1026
P+FI AAD+MTRGQSA+ L+D++M F+GH+KGGLAVSTA SCTLFGAVSGSTQATVVAVGSP+RPRMLKAGYKDSF LALI+NSSDIAFLIPPSIGMIIYGVIS TSI ELFIAGIGPGL+IL +FSIY V+YA +NKVPTEP+ASW R A+++ALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYA++LEF++FRSLK+ DIY IAKSTGLITAVVFILVA GNGFSWIISFA IPQT+LA +GINEAGP GVL+ I++ FFVACMFVDPIVVILVLTPIFAPAIA++GLDPVLVGVLITL VAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPF+F
Sbjct: 61 PMFIFAADVMTRGQSANRLVDLVMAFIGHIKGGLAVSTAASCTLFGAVSGSTQATVVAVGSPMRPRMLKAGYKDSFILALIVNSSDIAFLIPPSIGMIIYGVISGTSIGELFIAGIGPGLLILFVFSIYCVIYATLNKVPTEPRASWSERLTALRQALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAVILEFVVFRSLKMADIYKIAKSTGLITAVVFILVAVGNGFSWIISFAHIPQTLLAGIGINEAGPHGVLVIIALTFFVACMFVDPIVVILVLTPIFAPAIASTGLDPVLVGVLITLIVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFVF 402
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: UPI000FD72A0B (TRAP transporter large permease n=2 Tax=Saccharospirillum TaxID=231683 RepID=UPI000FD72A0B) HSP 1 Score: 566 bits (1459), Expect = 1.030e-200 Identity = 292/342 (85.38%), Postives = 317/342 (92.69%), Query Frame = 1
Query: 1 PLFILAADIMTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 1026
P+FILAADIMTRGQSA+ LIDM+M+F+GHVKGGLA+STA SCTLFGAVSGSTQATVVAVGSPLRP+MLKAGY D FTLALIIN+SDIAFLIPPSIGMIIYGVIS+TSIAELFIAG+GPGLMIL FS+Y+++YA N VPTEPKASW R AV ALWPL FPV+IVGGIYGG+FSPTEAAA CVLYA+ LEFI+FR LKLPD+Y IAKSTGLITAVVFILVA GNGFSWIISFAQIPQ+IL AVG+NE GP GVLI+I IAFF+ACMFVDPIVVILVLTPIFAPAIAA+GLDPVLVG+LITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF
Sbjct: 61 PMFILAADIMTRGQSANRLIDMVMSFIGHVKGGLAISTATSCTLFGAVSGSTQATVVAVGSPLRPKMLKAGYSDPFTLALIINASDIAFLIPPSIGMIIYGVISETSIAELFIAGVGPGLMILAFFSLYALIYAYRNNVPTEPKASWNERGKAVLGALWPLMFPVIIVGGIYGGIFSPTEAAAVCVLYAVFLEFIVFRELKLPDMYRIAKSTGLITAVVFILVAVGNGFSWIISFAQIPQSILEAVGVNEMGPAGVLISICIAFFIACMFVDPIVVILVLTPIFAPAIAATGLDPVLVGILITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 402
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Match: A4B9I7_9GAMM (TRAP dicarboxylate transporter, DctM subunit n=2 Tax=Reinekea TaxID=230494 RepID=A4B9I7_9GAMM) HSP 1 Score: 565 bits (1455), Expect = 3.490e-200 Identity = 288/342 (84.21%), Postives = 321/342 (93.86%), Query Frame = 1
Query: 1 PLFILAADIMTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVGSPLRPRMLKAGYKDSFTLALIINSSDIAFLIPPSIGMIIYGVISQTSIAELFIAGIGPGLMILLMFSIYSVMYAIINKVPTEPKASWKARAVAVQKALWPLGFPVLIVGGIYGGVFSPTEAAAACVLYAILLEFIIFRSLKLPDIYTIAKSTGLITAVVFILVAAGNGFSWIISFAQIPQTILAAVGINEAGPLGVLIAISIAFFVACMFVDPIVVILVLTPIFAPAIAASGLDPVLVGVLITLQVAIGSATPPFGCDIFTAIAIFKRPYWEVIRGTPPFIF 1026
P+FILAADIMTRG SA LIDM+M+F+GHVKGGLAVSTA SCTLFGAVSGSTQATVVA+GSPLRP+MLKAGY DSFTLALIIN+SDIAFLIPPSIGMIIYGVIS+TSIAELFIAG+GPGL+IL++FSIY ++YA +N +PTE K++WK RA AVQ A+WPL FPV+IVGGIYGG+FSPTEAAA CVLYA+LLEF+IF+SLKLPD+YTIAKSTGLITAVVFILV GNGFSWIISFAQIPQTIL AVG+N+ GP GVLI+I +AFFVACMFVDPIVVILVLTPIFAPAIAA+GLDPV VG+LITLQVAIGSATPPFGCDIFTAIAIFK+PYWEVI+GTPPFIF
Sbjct: 56 PMFILAADIMTRGHSADRLIDMVMSFIGHVKGGLAVSTAASCTLFGAVSGSTQATVVAIGSPLRPKMLKAGYSDSFTLALIINASDIAFLIPPSIGMIIYGVISETSIAELFIAGVGPGLLILVLFSIYCLIYATVNNLPTEEKSTWKQRAKAVQLAVWPLMFPVIIVGGIYGGIFSPTEAAAVCVLYAVLLEFVIFKSLKLPDMYTIAKSTGLITAVVFILVGVGNGFSWIISFAQIPQTILDAVGVNDMGPTGVLISICVAFFVACMFVDPIVVILVLTPIFAPAIAATGLDPVHVGILITLQVAIGSATPPFGCDIFTAIAIFKKPYWEVIKGTPPFIF 397 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14953.2879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig14953.2879.1 >prot_E-siliculosus-1a_F_contig14953.2879.1 ID=prot_E-siliculosus-1a_F_contig14953.2879.1|Name=mRNA_E-siliculosus-1a_F_contig14953.2879.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=333bp MTRGQSASCLIDMLMTFVGHVKGGLAVSTAVSCTLFGAVSGSTQATVVAVback to top mRNA from alignment at E-siliculosus-1a_F_contig14953:3..1028+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig14953.2879.1 ID=mRNA_E-siliculosus-1a_F_contig14953.2879.1|Name=mRNA_E-siliculosus-1a_F_contig14953.2879.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1026bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14953:3..1028+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14953:3..1028+ >mRNA_E-siliculosus-1a_F_contig14953.2879.1 ID=mRNA_E-siliculosus-1a_F_contig14953.2879.1|Name=mRNA_E-siliculosus-1a_F_contig14953.2879.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1998bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14953:3..1028+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |